Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_20090 and CA264_20095 overlap by 28 nucleotides CA264_20095 and CA264_20100 are separated by 111 nucleotides
CA264_20090: CA264_20090 - hypothetical protein, at 4,632,099 to 4,633,001
_20090
CA264_20095: CA264_20095 - 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB, at 4,632,974 to 4,633,816
_20095
CA264_20100: CA264_20100 - mannose-1-phosphate guanylyltransferase, at 4,633,928 to 4,635,004
_20100
Position (kb)
4632
4633
4634 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4631.986 kb on - strand at 4631.992 kb on - strand at 4632.068 kb on - strand at 4632.076 kb on + strand at 4632.077 kb on - strand at 4632.077 kb on - strand at 4632.077 kb on - strand at 4632.195 kb on - strand, within CA264_20090 at 4632.195 kb on - strand, within CA264_20090 at 4632.425 kb on + strand, within CA264_20090 at 4632.464 kb on + strand, within CA264_20090 at 4632.465 kb on - strand, within CA264_20090 at 4632.488 kb on + strand, within CA264_20090 at 4632.537 kb on + strand, within CA264_20090 at 4632.547 kb on + strand, within CA264_20090 at 4632.705 kb on + strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.706 kb on - strand, within CA264_20090 at 4632.708 kb on + strand, within CA264_20090 at 4632.708 kb on + strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.709 kb on - strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.781 kb on + strand, within CA264_20090 at 4632.782 kb on - strand, within CA264_20090 at 4632.782 kb on - strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.783 kb on + strand, within CA264_20090 at 4632.784 kb on - strand, within CA264_20090 at 4632.792 kb on + strand, within CA264_20090 at 4632.899 kb on + strand, within CA264_20090 at 4633.156 kb on - strand, within CA264_20095 at 4633.252 kb on + strand, within CA264_20095 at 4633.264 kb on + strand, within CA264_20095 at 4633.332 kb on + strand, within CA264_20095 at 4633.333 kb on - strand, within CA264_20095 at 4633.524 kb on - strand, within CA264_20095 at 4633.590 kb on - strand, within CA264_20095 at 4633.785 kb on - strand at 4633.815 kb on - strand at 4633.840 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 4,631,986 - -0.4 4,631,992 - +0.6 4,632,068 - +0.3 4,632,076 + -0.1 4,632,077 - +0.4 4,632,077 - +1.0 4,632,077 - -1.2 4,632,195 - CA264_20090 0.11 +0.1 4,632,195 - CA264_20090 0.11 -0.1 4,632,425 + CA264_20090 0.36 -0.3 4,632,464 + CA264_20090 0.40 +0.2 4,632,465 - CA264_20090 0.41 +0.0 4,632,488 + CA264_20090 0.43 -0.7 4,632,537 + CA264_20090 0.49 -0.2 4,632,547 + CA264_20090 0.50 -0.5 4,632,705 + CA264_20090 0.67 +0.8 4,632,706 - CA264_20090 0.67 -1.2 4,632,706 - CA264_20090 0.67 -0.3 4,632,706 - CA264_20090 0.67 +0.1 4,632,708 + CA264_20090 0.67 +0.5 4,632,708 + CA264_20090 0.67 -0.6 4,632,709 - CA264_20090 0.68 +0.7 4,632,709 - CA264_20090 0.68 -0.1 4,632,709 - CA264_20090 0.68 +0.1 4,632,781 + CA264_20090 0.76 -0.5 4,632,781 + CA264_20090 0.76 +1.8 4,632,781 + CA264_20090 0.76 +0.5 4,632,781 + CA264_20090 0.76 -0.4 4,632,782 - CA264_20090 0.76 -0.0 4,632,782 - CA264_20090 0.76 -2.2 4,632,783 + CA264_20090 0.76 -0.2 4,632,783 + CA264_20090 0.76 -0.4 4,632,783 + CA264_20090 0.76 +0.3 4,632,783 + CA264_20090 0.76 -1.0 4,632,783 + CA264_20090 0.76 +0.1 4,632,783 + CA264_20090 0.76 -1.1 4,632,784 - CA264_20090 0.76 -0.3 4,632,792 + CA264_20090 0.77 -0.1 4,632,899 + CA264_20090 0.89 +0.5 4,633,156 - CA264_20095 0.22 -0.8 4,633,252 + CA264_20095 0.33 +1.3 4,633,264 + CA264_20095 0.34 -0.4 4,633,332 + CA264_20095 0.42 +1.1 4,633,333 - CA264_20095 0.43 -0.9 4,633,524 - CA264_20095 0.65 -1.5 4,633,590 - CA264_20095 0.73 -0.8 4,633,785 - +0.4 4,633,815 - +0.4 4,633,840 - -0.0
Or see this region's nucleotide sequence