Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_16360 and CA264_16365 are separated by 49 nucleotides CA264_16365 and CA264_16370 are separated by 78 nucleotides
CA264_16360: CA264_16360 - gliding motility protein GldM, at 3,807,390 to 3,808,982
_16360
CA264_16365: CA264_16365 - gliding motility protein GldL, at 3,809,032 to 3,809,832
_16365
CA264_16370: CA264_16370 - gliding motility lipoprotein GldK, at 3,809,911 to 3,810,927
_16370
Position (kb)
3809
3810 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3808.091 kb on + strand, within CA264_16360 at 3808.110 kb on - strand, within CA264_16360 at 3808.132 kb on - strand, within CA264_16360 at 3808.312 kb on - strand, within CA264_16360 at 3808.348 kb on + strand, within CA264_16360 at 3808.349 kb on - strand, within CA264_16360 at 3808.496 kb on + strand, within CA264_16360 at 3808.497 kb on - strand, within CA264_16360 at 3808.508 kb on + strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.538 kb on - strand, within CA264_16360 at 3808.564 kb on + strand, within CA264_16360 at 3808.779 kb on - strand, within CA264_16360 at 3808.809 kb on + strand, within CA264_16360 at 3808.810 kb on - strand, within CA264_16360 at 3808.927 kb on - strand at 3808.987 kb on + strand at 3808.990 kb on + strand at 3808.993 kb on - strand at 3808.993 kb on - strand at 3808.995 kb on + strand at 3808.995 kb on + strand at 3809.272 kb on + strand, within CA264_16365 at 3809.346 kb on - strand, within CA264_16365 at 3809.386 kb on + strand, within CA264_16365 at 3809.575 kb on + strand, within CA264_16365 at 3809.594 kb on + strand, within CA264_16365 at 3809.595 kb on - strand, within CA264_16365 at 3809.780 kb on - strand at 3809.848 kb on - strand at 3809.851 kb on + strand at 3809.851 kb on + strand at 3809.852 kb on - strand at 3809.867 kb on - strand at 3809.873 kb on + strand at 3809.905 kb on + strand at 3809.942 kb on + strand at 3809.969 kb on + strand at 3809.970 kb on - strand at 3810.052 kb on + strand, within CA264_16370 at 3810.052 kb on + strand, within CA264_16370 at 3810.053 kb on - strand, within CA264_16370 at 3810.055 kb on + strand, within CA264_16370 at 3810.055 kb on + strand, within CA264_16370 at 3810.056 kb on - strand, within CA264_16370 at 3810.104 kb on - strand, within CA264_16370 at 3810.129 kb on - strand, within CA264_16370 at 3810.195 kb on - strand, within CA264_16370 at 3810.213 kb on + strand, within CA264_16370 at 3810.215 kb on + strand, within CA264_16370 at 3810.236 kb on + strand, within CA264_16370 at 3810.322 kb on - strand, within CA264_16370 at 3810.344 kb on + strand, within CA264_16370 at 3810.345 kb on - strand, within CA264_16370 at 3810.510 kb on - strand, within CA264_16370 at 3810.512 kb on + strand, within CA264_16370 at 3810.513 kb on - strand, within CA264_16370 at 3810.540 kb on - strand, within CA264_16370 at 3810.545 kb on + strand, within CA264_16370 at 3810.567 kb on + strand, within CA264_16370 at 3810.697 kb on - strand, within CA264_16370 at 3810.708 kb on + strand, within CA264_16370
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 3,808,091 + CA264_16360 0.44 -2.7 3,808,110 - CA264_16360 0.45 -1.8 3,808,132 - CA264_16360 0.47 -1.8 3,808,312 - CA264_16360 0.58 -2.7 3,808,348 + CA264_16360 0.60 -0.3 3,808,349 - CA264_16360 0.60 -0.7 3,808,496 + CA264_16360 0.69 -1.6 3,808,497 - CA264_16360 0.69 -0.8 3,808,508 + CA264_16360 0.70 -0.2 3,808,538 - CA264_16360 0.72 -1.4 3,808,538 - CA264_16360 0.72 -1.8 3,808,538 - CA264_16360 0.72 +0.3 3,808,564 + CA264_16360 0.74 -0.7 3,808,779 - CA264_16360 0.87 -1.4 3,808,809 + CA264_16360 0.89 -1.5 3,808,810 - CA264_16360 0.89 -1.5 3,808,927 - -0.8 3,808,987 + -1.1 3,808,990 + +0.2 3,808,993 - +0.2 3,808,993 - -0.4 3,808,995 + -0.2 3,808,995 + -1.2 3,809,272 + CA264_16365 0.30 -2.1 3,809,346 - CA264_16365 0.39 -1.3 3,809,386 + CA264_16365 0.44 -1.7 3,809,575 + CA264_16365 0.68 -0.2 3,809,594 + CA264_16365 0.70 -2.2 3,809,595 - CA264_16365 0.70 -0.9 3,809,780 - -0.3 3,809,848 - +0.2 3,809,851 + -0.5 3,809,851 + +0.4 3,809,852 - -0.2 3,809,867 - +0.8 3,809,873 + -0.4 3,809,905 + +0.1 3,809,942 + +0.4 3,809,969 + -1.8 3,809,970 - -2.0 3,810,052 + CA264_16370 0.14 -3.4 3,810,052 + CA264_16370 0.14 -0.2 3,810,053 - CA264_16370 0.14 -2.0 3,810,055 + CA264_16370 0.14 -1.2 3,810,055 + CA264_16370 0.14 -0.6 3,810,056 - CA264_16370 0.14 -2.1 3,810,104 - CA264_16370 0.19 -1.2 3,810,129 - CA264_16370 0.21 -2.0 3,810,195 - CA264_16370 0.28 -2.1 3,810,213 + CA264_16370 0.30 -1.8 3,810,215 + CA264_16370 0.30 +0.2 3,810,236 + CA264_16370 0.32 -2.4 3,810,322 - CA264_16370 0.40 -1.2 3,810,344 + CA264_16370 0.43 -1.0 3,810,345 - CA264_16370 0.43 -1.3 3,810,510 - CA264_16370 0.59 -1.1 3,810,512 + CA264_16370 0.59 +0.8 3,810,513 - CA264_16370 0.59 -1.8 3,810,540 - CA264_16370 0.62 -1.8 3,810,545 + CA264_16370 0.62 -0.1 3,810,567 + CA264_16370 0.65 -1.2 3,810,697 - CA264_16370 0.77 -2.2 3,810,708 + CA264_16370 0.78 -3.1
Or see this region's nucleotide sequence