Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14310 and CA264_14315 are separated by 189 nucleotides CA264_14315 and CA264_14320 are separated by 175 nucleotides CA264_14320 and CA264_14325 are separated by 78 nucleotides CA264_14325 and CA264_14330 are separated by 262 nucleotides
CA264_14310: CA264_14310 - hypothetical protein, at 3,360,826 to 3,361,260
_14310
CA264_14315: CA264_14315 - hypothetical protein, at 3,361,450 to 3,362,004
_14315
CA264_14320: CA264_14320 - tRNA-specific adenosine deaminase, at 3,362,180 to 3,362,593
_14320
CA264_14325: CA264_14325 - superoxide dismutase, at 3,362,672 to 3,363,280
_14325
CA264_14330: CA264_14330 - hypothetical protein, at 3,363,543 to 3,365,882
_14330
Position (kb)
3362
3363 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3361.200 kb on - strand, within CA264_14310 at 3361.247 kb on - strand at 3361.260 kb on + strand at 3361.260 kb on + strand at 3361.261 kb on - strand at 3361.263 kb on + strand at 3361.264 kb on - strand at 3361.298 kb on + strand at 3361.304 kb on + strand at 3361.304 kb on + strand at 3361.348 kb on + strand at 3361.445 kb on + strand at 3361.445 kb on + strand at 3361.446 kb on - strand at 3361.446 kb on - strand at 3361.467 kb on - strand at 3361.572 kb on + strand, within CA264_14315 at 3361.572 kb on + strand, within CA264_14315 at 3361.572 kb on + strand, within CA264_14315 at 3361.659 kb on - strand, within CA264_14315 at 3361.665 kb on + strand, within CA264_14315 at 3361.767 kb on + strand, within CA264_14315 at 3361.891 kb on + strand, within CA264_14315 at 3361.891 kb on + strand, within CA264_14315 at 3361.915 kb on + strand, within CA264_14315 at 3361.924 kb on - strand, within CA264_14315 at 3361.995 kb on + strand at 3361.999 kb on - strand at 3362.012 kb on + strand at 3362.012 kb on + strand at 3362.012 kb on + strand at 3362.016 kb on + strand at 3362.016 kb on + strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.017 kb on - strand at 3362.020 kb on + strand at 3362.021 kb on - strand at 3362.021 kb on - strand at 3362.021 kb on - strand at 3362.024 kb on + strand at 3362.135 kb on - strand at 3362.443 kb on - strand, within CA264_14320 at 3362.486 kb on - strand, within CA264_14320 at 3362.654 kb on + strand at 3363.296 kb on + strand at 3363.303 kb on + strand at 3363.309 kb on + strand at 3363.309 kb on + strand at 3363.316 kb on + strand at 3363.340 kb on + strand at 3363.340 kb on + strand at 3363.340 kb on + strand at 3363.342 kb on + strand at 3363.388 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.419 kb on + strand at 3363.420 kb on - strand at 3363.420 kb on - strand at 3363.428 kb on + strand at 3363.428 kb on + strand at 3363.429 kb on - strand at 3363.467 kb on - strand at 3363.470 kb on + strand at 3363.471 kb on - strand at 3363.503 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 3,361,200 - CA264_14310 0.86 -0.0 3,361,247 - -0.5 3,361,260 + -0.3 3,361,260 + +0.0 3,361,261 - -0.7 3,361,263 + -1.0 3,361,264 - -0.0 3,361,298 + -0.7 3,361,304 + +0.8 3,361,304 + -0.1 3,361,348 + +0.4 3,361,445 + +2.3 3,361,445 + -0.3 3,361,446 - -0.5 3,361,446 - -0.0 3,361,467 - +0.6 3,361,572 + CA264_14315 0.22 -0.1 3,361,572 + CA264_14315 0.22 +0.4 3,361,572 + CA264_14315 0.22 -0.3 3,361,659 - CA264_14315 0.38 -0.3 3,361,665 + CA264_14315 0.39 +1.2 3,361,767 + CA264_14315 0.57 -0.4 3,361,891 + CA264_14315 0.79 +0.1 3,361,891 + CA264_14315 0.79 -0.1 3,361,915 + CA264_14315 0.84 -0.6 3,361,924 - CA264_14315 0.85 +1.0 3,361,995 + -1.9 3,361,999 - +0.7 3,362,012 + -0.3 3,362,012 + -0.6 3,362,012 + -0.5 3,362,016 + +0.1 3,362,016 + -0.4 3,362,017 - -0.9 3,362,017 - -0.3 3,362,017 - +0.9 3,362,017 - -0.8 3,362,020 + -2.4 3,362,021 - +1.4 3,362,021 - -1.3 3,362,021 - +0.2 3,362,024 + +0.2 3,362,135 - -0.6 3,362,443 - CA264_14320 0.64 -0.6 3,362,486 - CA264_14320 0.74 -0.5 3,362,654 + -0.0 3,363,296 + +0.3 3,363,303 + -0.3 3,363,309 + -2.9 3,363,309 + -0.9 3,363,316 + -0.4 3,363,340 + +0.0 3,363,340 + +0.1 3,363,340 + -1.2 3,363,342 + -0.2 3,363,388 + +0.7 3,363,419 + +0.1 3,363,419 + -0.3 3,363,419 + -0.9 3,363,419 + +0.3 3,363,420 - -0.3 3,363,420 - -1.7 3,363,428 + -0.5 3,363,428 + +1.2 3,363,429 - -0.4 3,363,467 - -0.7 3,363,470 + +2.3 3,363,471 - -1.0 3,363,503 - -0.6
Or see this region's nucleotide sequence