Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_12730 and CA264_12735 are separated by 39 nucleotides CA264_12735 and CA264_12740 are separated by 14 nucleotides
CA264_12730: CA264_12730 - sodium:solute symporter, at 2,967,299 to 2,968,777
_12730
CA264_12735: CA264_12735 - hypothetical protein, at 2,968,817 to 2,969,038
_12735
CA264_12740: CA264_12740 - multidrug ABC transporter ATP-binding protein, at 2,969,053 to 2,970,873
_12740
Position (kb)
2968
2969
2970 Strain fitness (log2 ratio)
-1
0
1
2 at 2967.860 kb on - strand, within CA264_12730 at 2967.908 kb on - strand, within CA264_12730 at 2967.930 kb on + strand, within CA264_12730 at 2967.930 kb on + strand, within CA264_12730 at 2967.931 kb on - strand, within CA264_12730 at 2967.931 kb on - strand, within CA264_12730 at 2967.980 kb on - strand, within CA264_12730 at 2967.992 kb on + strand, within CA264_12730 at 2968.128 kb on + strand, within CA264_12730 at 2968.129 kb on - strand, within CA264_12730 at 2968.129 kb on - strand, within CA264_12730 at 2968.176 kb on - strand, within CA264_12730 at 2968.176 kb on - strand, within CA264_12730 at 2968.281 kb on + strand, within CA264_12730 at 2968.301 kb on - strand, within CA264_12730 at 2968.304 kb on + strand, within CA264_12730 at 2968.305 kb on - strand, within CA264_12730 at 2968.305 kb on - strand, within CA264_12730 at 2968.499 kb on - strand, within CA264_12730 at 2968.517 kb on + strand, within CA264_12730 at 2968.518 kb on - strand, within CA264_12730 at 2968.538 kb on + strand, within CA264_12730 at 2968.603 kb on - strand, within CA264_12730 at 2968.620 kb on + strand, within CA264_12730 at 2968.631 kb on + strand at 2968.659 kb on - strand at 2968.780 kb on + strand at 2968.797 kb on - strand at 2968.798 kb on + strand at 2968.798 kb on + strand at 2968.915 kb on - strand, within CA264_12735 at 2968.922 kb on - strand, within CA264_12735 at 2968.930 kb on - strand, within CA264_12735 at 2968.973 kb on + strand, within CA264_12735 at 2968.975 kb on + strand, within CA264_12735 at 2968.984 kb on - strand, within CA264_12735 at 2969.036 kb on + strand at 2969.046 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 2,967,860 - CA264_12730 0.38 -1.1 2,967,908 - CA264_12730 0.41 -0.8 2,967,930 + CA264_12730 0.43 +1.8 2,967,930 + CA264_12730 0.43 -0.0 2,967,931 - CA264_12730 0.43 +0.6 2,967,931 - CA264_12730 0.43 -0.6 2,967,980 - CA264_12730 0.46 +0.1 2,967,992 + CA264_12730 0.47 +1.2 2,968,128 + CA264_12730 0.56 -0.8 2,968,129 - CA264_12730 0.56 +0.8 2,968,129 - CA264_12730 0.56 -1.2 2,968,176 - CA264_12730 0.59 -0.8 2,968,176 - CA264_12730 0.59 -1.5 2,968,281 + CA264_12730 0.66 +1.1 2,968,301 - CA264_12730 0.68 -0.5 2,968,304 + CA264_12730 0.68 +0.8 2,968,305 - CA264_12730 0.68 +0.3 2,968,305 - CA264_12730 0.68 -1.3 2,968,499 - CA264_12730 0.81 +0.4 2,968,517 + CA264_12730 0.82 +1.4 2,968,518 - CA264_12730 0.82 +0.0 2,968,538 + CA264_12730 0.84 -0.1 2,968,603 - CA264_12730 0.88 -0.8 2,968,620 + CA264_12730 0.89 -0.8 2,968,631 + +1.8 2,968,659 - +0.3 2,968,780 + -0.4 2,968,797 - -0.5 2,968,798 + -0.4 2,968,798 + +0.0 2,968,915 - CA264_12735 0.44 +0.8 2,968,922 - CA264_12735 0.47 -0.5 2,968,930 - CA264_12735 0.51 -1.0 2,968,973 + CA264_12735 0.70 -0.1 2,968,975 + CA264_12735 0.71 -0.3 2,968,984 - CA264_12735 0.75 +0.2 2,969,036 + -0.3 2,969,046 - +1.5
Or see this region's nucleotide sequence