Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_07170

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,655,874	+		CA264_07160	0.86	+0.3
1,655,951	+				+0.1
1,655,952	-				+0.8
1,655,987	-				+0.3
1,655,996	-				-0.3
1,656,035	-				-0.9
1,656,057	-				-0.8
1,656,057	-				-0.8
1,656,088	-				+0.4
1,656,097	-				-0.4
1,656,100	+				-0.9
1,656,101	-				-0.8
1,656,101	-				-1.5
1,656,105	-				-1.8
1,656,110	+				+0.8
1,656,110	+				-0.2
1,656,111	-				+1.5
1,656,119	+				+0.4
1,656,215	+				+0.7
1,656,315	+				+0.1
1,656,468	+				-0.1
1,656,468	+				+1.2
1,656,469	-				+0.8
1,656,498	+				+0.3
1,656,641	-		CA264_07165	0.31	+0.6
1,656,652	+		CA264_07165	0.36	-1.6
1,656,718	-		CA264_07165	0.70	-1.4
1,656,758	+				-0.4
1,656,768	-				+0.5
1,656,768	-				-0.5
1,656,793	+				+0.8
1,656,794	-				+0.2
1,656,797	+				-0.2
1,656,797	+				-0.8
1,656,824	-				-0.1
1,656,824	-				-0.4
1,656,827	+				-0.4
1,656,827	+				+0.8
1,656,827	+				-0.4
1,656,828	-				+0.3
1,656,833	+				+0.0
1,656,856	+				-1.2
1,656,900	+				-0.3
1,656,905	-				-0.2
1,656,949	+				-0.3
1,656,950	-				+1.8
1,656,960	-				+1.2
1,656,962	-				-0.4
1,656,962	-				+0.6
1,656,969	+				-1.1
1,656,970	-				+0.1
1,656,970	-				-0.5
1,656,973	+				-1.5
1,657,007	+				+0.8
1,657,008	-				+0.4
1,657,009	+				-0.3
1,657,030	-		CA264_07170	0.11	-0.0
1,657,040	-		CA264_07170	0.12	+0.0
1,657,094	+		CA264_07170	0.15	+0.4
1,657,094	+		CA264_07170	0.15	-0.6
1,657,094	+		CA264_07170	0.15	+0.1
1,657,160	+		CA264_07170	0.20	+0.2
1,657,161	-		CA264_07170	0.20	-0.1
1,657,359	+		CA264_07170	0.33	+0.7
1,657,360	-		CA264_07170	0.33	-0.6
1,657,392	-		CA264_07170	0.35	+1.5
1,657,392	-		CA264_07170	0.35	+0.1
1,657,392	-		CA264_07170	0.35	-0.5
1,657,460	+		CA264_07170	0.39	+1.0
1,657,466	+		CA264_07170	0.39	+0.0
1,657,466	+		CA264_07170	0.39	-0.3
1,657,561	+		CA264_07170	0.46	+0.1
1,657,595	+		CA264_07170	0.48	+0.3
1,657,596	-		CA264_07170	0.48	-0.4
1,657,635	+		CA264_07170	0.50	-1.1
1,657,670	+		CA264_07170	0.53	-1.2
1,657,699	-				-0.8
1,657,718	-		CA264_07170	0.56	+0.5
1,657,858	+		CA264_07170	0.65	+0.1
1,657,921	+		CA264_07170	0.69	+0.4
1,657,921	+		CA264_07170	0.69	+0.8
1,657,922	-		CA264_07170	0.69	+1.1
1,657,922	-		CA264_07170	0.69	+1.5
1,657,925	+		CA264_07170	0.69	-0.4
1,657,932	-		CA264_07170	0.70	+1.6
1,657,936	+		CA264_07170	0.70	+0.8
1,657,937	-		CA264_07170	0.70	-0.5
1,657,937	-		CA264_07170	0.70	+1.0
1,658,007	+		CA264_07170	0.74	-0.5
1,658,007	+		CA264_07170	0.74	+1.5
1,658,007	+		CA264_07170	0.74	+2.2
1,658,007	+		CA264_07170	0.74	+2.4
1,658,008	-		CA264_07170	0.74	+0.4
1,658,008	-		CA264_07170	0.74	+0.1
1,658,082	+		CA264_07170	0.79	-0.3
1,658,085	-		CA264_07170	0.79	-0.0
1,658,085	-		CA264_07170	0.79	-0.3
1,658,096	+		CA264_07170	0.80	-0.3
1,658,148	-		CA264_07170	0.84	-1.5
1,658,160	-		CA264_07170	0.84	-0.3
1,658,174	-		CA264_07170	0.85	-0.5
1,658,265	-				-0.3
1,658,288	+				+1.0
1,658,289	-				+2.8
1,658,295	+				-1.6
1,658,295	+				+0.2
1,658,296	-				+0.2
1,658,321	+				-0.9
1,658,322	-				-0.6
1,658,404	+				+0.6
1,658,405	-				+0.1
1,658,408	+				+2.8
1,658,409	-				-0.5
1,658,435	+				+0.4
1,658,436	-				+0.5
1,658,437	+				+0.8
1,658,437	+				+1.4
1,658,437	+				+1.8
1,658,437	+				+0.1
1,658,437	+				+0.2
1,658,438	-				-0.1
1,658,438	-				+1.0
1,658,513	-		CA264_07175	0.10	-0.8
1,658,513	-		CA264_07175	0.10	-0.2
1,658,591	+		CA264_07175	0.18	-0.2
1,658,605	+		CA264_07175	0.19	-1.8
1,658,605	+		CA264_07175	0.19	+1.0
1,658,695	+		CA264_07175	0.28	+0.6
1,658,696	-		CA264_07175	0.28	+0.2
1,658,699	+		CA264_07175	0.28	-0.7
1,658,813	+		CA264_07175	0.39	-0.4
1,658,874	+		CA264_07175	0.45	+0.5
1,658,946	-		CA264_07175	0.51	+0.5
1,659,000	+		CA264_07175	0.57	-0.7
1,659,000	+		CA264_07175	0.57	-0.1
1,659,003	+		CA264_07175	0.57	-0.1
1,659,004	-		CA264_07175	0.57	-1.1
1,659,036	+		CA264_07175	0.60	+0.4
1,659,065	-		CA264_07175	0.63	+0.6
1,659,065	-		CA264_07175	0.63	-1.5
1,659,136	+		CA264_07175	0.70	-1.7
1,659,190	+		CA264_07175	0.75	+1.1
1,659,268	-		CA264_07175	0.82	-0.1
1,659,268	-		CA264_07175	0.82	+0.4
1,659,268	-		CA264_07175	0.82	-0.3
1,659,354	-				-0.2
1,659,359	+				-0.1
1,659,359	+				-0.8
1,659,391	+				+0.0
1,659,394	-				-0.5