Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05550

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,291,485	+		CA264_05545	0.39	+0.1
1,291,485	+		CA264_05545	0.39	-0.5
1,291,486	-		CA264_05545	0.39	+0.5
1,291,502	+		CA264_05545	0.41	-0.6
1,291,503	-		CA264_05545	0.42	-0.2
1,291,535	+		CA264_05545	0.46	-0.0
1,291,536	-		CA264_05545	0.46	-0.8
1,291,536	-		CA264_05545	0.46	-0.2
1,291,664	+		CA264_05545	0.62	+0.4
1,291,665	-		CA264_05545	0.63	-0.4
1,291,665	-		CA264_05545	0.63	-0.0
1,291,722	+		CA264_05545	0.70	-0.1
1,291,722	+		CA264_05545	0.70	+0.8
1,291,722	+		CA264_05545	0.70	-0.8
1,291,722	+		CA264_05545	0.70	-1.8
1,291,723	-		CA264_05545	0.70	+0.8
1,291,862	-		CA264_05545	0.88	+1.6
1,291,872	-		CA264_05545	0.90	-0.8
1,291,910	+				-0.7
1,291,910	+				+1.0
1,291,911	-				+0.2
1,291,951	+				+0.3
1,291,951	+				+1.6
1,291,951	+				-0.4
1,291,957	+				-1.5
1,291,958	-				-0.3
1,291,990	+				-0.7
1,292,010	+				+0.1
1,292,011	-				-2.0
1,292,011	-				-0.8
1,292,041	+				-1.2
1,292,078	+				-1.2
1,292,178	-				-1.2
1,292,179	+				+0.4
1,292,179	+				-0.4
1,292,179	+				+0.1
1,292,179	+				-2.5
1,292,180	-				-0.8
1,292,180	-				-0.4
1,292,180	-				-0.3
1,292,180	-				-1.0
1,292,200	-				+0.2
1,292,218	+				+0.1
1,292,218	+				-0.8
1,292,224	+				+0.4
1,292,317	+				+0.2
1,292,317	+				-0.4
1,292,317	+				+0.1
1,292,317	+				+0.8
1,292,318	-				-0.9
1,292,406	-				+0.6
1,292,456	-				-0.3
1,292,531	+		CA264_05550	0.12	-0.5
1,292,531	+		CA264_05550	0.12	+0.2
1,292,532	-		CA264_05550	0.13	+0.2
1,292,532	-		CA264_05550	0.13	+1.1
1,292,621	+		CA264_05550	0.21	+0.0
1,292,621	+		CA264_05550	0.21	+0.3
1,292,622	-		CA264_05550	0.21	-0.2
1,292,624	+		CA264_05550	0.22	-0.2
1,292,625	-		CA264_05550	0.22	+0.2
1,292,636	-		CA264_05550	0.23	-0.8
1,292,705	+		CA264_05550	0.30	+1.4
1,292,705	+		CA264_05550	0.30	-0.2
1,292,705	+		CA264_05550	0.30	+0.4
1,292,705	+		CA264_05550	0.30	+0.3
1,292,706	-		CA264_05550	0.30	-0.1
1,292,706	-		CA264_05550	0.30	-0.3
1,292,706	-		CA264_05550	0.30	+1.8
1,292,712	-		CA264_05550	0.30	+0.6
1,292,757	-		CA264_05550	0.35	+0.6
1,292,825	+		CA264_05550	0.41	-0.8
1,292,832	+		CA264_05550	0.42	+0.3
1,292,833	-		CA264_05550	0.42	+0.2
1,292,835	-		CA264_05550	0.42	-0.1
1,292,865	+		CA264_05550	0.45	+0.3
1,292,870	-		CA264_05550	0.46	-0.1
1,292,940	-		CA264_05550	0.53	-1.0
1,292,975	+		CA264_05550	0.56	+0.6
1,293,028	+		CA264_05550	0.61	-1.5
1,293,029	-		CA264_05550	0.61	-0.4
1,293,059	+		CA264_05550	0.64	+2.4
1,293,060	-		CA264_05550	0.64	-0.8
1,293,246	+		CA264_05550	0.83	+0.7
1,293,266	-		CA264_05550	0.85	-0.4
1,293,266	-		CA264_05550	0.85	+0.7
1,293,330	+				-0.3
1,293,331	-				-0.5
1,293,385	+				+0.1
1,293,400	+				+1.2
1,293,467	+				+0.2
1,293,471	+				+0.5
1,293,471	+				+0.8
1,293,546	-				+0.5
1,293,554	-				-1.2
1,293,584	+				-0.1
1,293,585	-				+1.0
1,293,596	+				+0.2
1,293,597	-				-0.3
1,293,597	-				+0.1
1,293,652	+		CA264_05555	0.12	-0.0
1,293,744	+		CA264_05555	0.21	-0.8
1,293,775	+		CA264_05555	0.24	+0.8
1,293,785	+		CA264_05555	0.25	+0.8
1,293,851	-		CA264_05555	0.31	+1.1
1,293,854	+		CA264_05555	0.31	-0.6
1,293,855	-		CA264_05555	0.31	-2.5
1,293,855	-		CA264_05555	0.31	+0.8
1,293,867	-		CA264_05555	0.32	+0.2
1,293,878	-		CA264_05555	0.34	-0.1
1,293,878	-		CA264_05555	0.34	-0.2
1,293,937	+		CA264_05555	0.39	-0.8
1,293,938	-		CA264_05555	0.39	-0.0
1,293,964	+		CA264_05555	0.42	-0.4
1,293,965	-		CA264_05555	0.42	-0.1
1,293,980	+		CA264_05555	0.43	+0.4
1,293,980	+		CA264_05555	0.43	-1.2
1,293,981	-		CA264_05555	0.43	+0.1
1,294,025	-		CA264_05555	0.48	-0.7
1,294,030	-		CA264_05555	0.48	-0.8
1,294,097	-		CA264_05555	0.55	+0.0
1,294,199	-		CA264_05555	0.64	-0.4