Strain Fitness in Pontibacter actiniarum KMM 6156, DSM 19842 around CA264_05250

Experiment: m.b. Nalidixic 0.008 mg/ml

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	m.b. Nalidixic 0.008 mg/ml
1,216,229	+		CA264_05245	0.78	+0.1
1,216,230	-		CA264_05245	0.78	+0.9
1,216,692	-				-1.3
1,216,916	-				-0.1
1,216,923	+				-0.1
1,217,040	-				-0.0
1,217,082	+				-0.6
1,217,086	+				-0.3
1,217,263	+		CA264_05250	0.11	-0.6
1,217,348	+		CA264_05250	0.16	+1.0
1,217,348	+		CA264_05250	0.16	+0.7
1,217,348	+		CA264_05250	0.16	+0.6
1,217,434	+		CA264_05250	0.22	+1.1
1,217,434	+		CA264_05250	0.22	-1.3
1,217,434	+		CA264_05250	0.22	-2.1
1,217,437	-		CA264_05250	0.22	+1.1
1,217,480	+		CA264_05250	0.24	+0.9
1,217,481	-		CA264_05250	0.24	+0.1
1,217,481	-		CA264_05250	0.24	+0.8
1,217,617	+		CA264_05250	0.33	+0.4
1,217,643	+		CA264_05250	0.35	+0.2
1,217,643	+		CA264_05250	0.35	+0.9
1,217,644	-		CA264_05250	0.35	-0.0
1,217,701	+		CA264_05250	0.38	+1.0
1,217,701	+		CA264_05250	0.38	-0.5
1,217,701	+		CA264_05250	0.38	-1.5
1,217,731	+		CA264_05250	0.40	+0.3
1,217,732	-		CA264_05250	0.40	-0.1
1,217,732	-		CA264_05250	0.40	-0.5
1,217,732	-		CA264_05250	0.40	+0.4
1,217,734	-		CA264_05250	0.40	+0.9
1,217,734	-		CA264_05250	0.40	-0.1
1,217,734	-		CA264_05250	0.40	+2.7
1,217,734	-		CA264_05250	0.40	+0.2
1,217,734	-		CA264_05250	0.40	+0.6
1,217,747	+		CA264_05250	0.41	+1.4
1,217,770	+		CA264_05250	0.42	-0.7
1,217,771	-		CA264_05250	0.42	-1.1
1,217,916	-		CA264_05250	0.51	+0.2
1,217,920	+		CA264_05250	0.52	+1.1
1,217,941	-		CA264_05250	0.53	+0.4
1,217,945	-		CA264_05250	0.53	+0.6
1,217,945	-		CA264_05250	0.53	+0.9
1,217,945	-		CA264_05250	0.53	+0.6
1,217,945	-		CA264_05250	0.53	+0.4
1,217,945	-		CA264_05250	0.53	+0.8
1,217,945	-		CA264_05250	0.53	-1.0
1,217,945	-		CA264_05250	0.53	+2.4
1,217,945	-		CA264_05250	0.53	+0.3
1,218,014	-		CA264_05250	0.57	+0.0
1,218,065	-		CA264_05250	0.61	+0.1
1,218,065	-		CA264_05250	0.61	-0.7
1,218,065	-		CA264_05250	0.61	+0.0
1,218,065	-		CA264_05250	0.61	+0.4
1,218,065	-		CA264_05250	0.61	-0.8
1,218,065	-		CA264_05250	0.61	+0.9
1,218,239	-		CA264_05250	0.71	+1.0
1,218,316	+		CA264_05250	0.76	+0.8
1,218,317	-		CA264_05250	0.76	+0.5
1,218,431	-		CA264_05250	0.83	-0.4
1,218,436	-		CA264_05250	0.84	+0.9
1,218,436	-		CA264_05250	0.84	-0.1
1,218,439	+		CA264_05250	0.84	-0.1
1,218,440	-		CA264_05250	0.84	-0.7
1,218,440	-		CA264_05250	0.84	+0.8
1,218,460	+		CA264_05250	0.85	-0.4
1,218,460	+		CA264_05250	0.85	-0.1
1,218,565	+				+0.3
1,218,566	-				+0.9
1,218,586	+				+0.5
1,218,586	+				+1.2
1,218,586	+				-0.3
1,218,710	+				+0.6
1,218,728	+				-0.5
1,218,729	-				-0.3
1,218,731	-				-1.1
1,218,738	+				+0.1
1,218,741	-				-0.1
1,218,741	-				+0.0
1,218,756	+				-0.6
1,218,787	+				+0.6
1,218,787	+				-0.3
1,218,787	+				-1.7
1,218,787	+				-0.6
1,218,788	-				-0.1
1,218,819	+		CA264_05255	0.11	-0.8
1,218,819	+		CA264_05255	0.11	-0.0
1,218,819	+		CA264_05255	0.11	+0.9
1,218,861	-		CA264_05255	0.19	-0.2
1,218,861	-		CA264_05255	0.19	-0.3
1,218,861	-		CA264_05255	0.19	+0.2
1,218,866	+		CA264_05255	0.20	+1.6
1,218,867	-		CA264_05255	0.20	-0.4
1,218,932	+		CA264_05255	0.32	+0.7
1,218,932	+		CA264_05255	0.32	-0.3
1,218,933	-		CA264_05255	0.32	+0.1
1,218,933	-		CA264_05255	0.32	-0.2
1,218,977	+		CA264_05255	0.41	-0.1
1,218,978	-		CA264_05255	0.41	-0.6
1,219,134	+		CA264_05255	0.71	+1.9
1,219,134	+		CA264_05255	0.71	-0.7
1,219,174	+		CA264_05255	0.78	+0.3
1,219,282	-				+0.9
1,219,285	+				-1.3
1,219,286	-				-0.6
1,219,286	-				-0.1
1,219,286	-				+0.2
1,219,449	+		CA264_05260	0.19	-1.0
1,219,450	-		CA264_05260	0.19	+0.1
1,219,478	-		CA264_05260	0.23	-0.2
1,219,564	-		CA264_05260	0.36	-0.2
1,219,585	+		CA264_05260	0.39	-0.7
1,219,647	-		CA264_05260	0.49	+0.9