Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04260 and CA264_04265 are separated by 274 nucleotides CA264_04265 and CA264_04270 are separated by 53 nucleotides CA264_04270 and CA264_04275 are separated by 64 nucleotides
CA264_04260: CA264_04260 - NADH-quinone oxidoreductase subunit C/D, at 984,459 to 986,207
_04260
CA264_04265: CA264_04265 - NADH-quinone oxidoreductase subunit B, at 986,482 to 987,120
_04265
CA264_04270: CA264_04270 - NADH:ubiquinone oxidoreductase subunit A, at 987,174 to 987,605
_04270
CA264_04275: CA264_04275 - histidine kinase, at 987,670 to 988,101
_04275
Position (kb) 986
987
988 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 985.513 kb on - strand, within CA264_04260 at 985.534 kb on - strand, within CA264_04260 at 985.534 kb on - strand, within CA264_04260 at 985.662 kb on - strand, within CA264_04260 at 985.792 kb on + strand, within CA264_04260 at 985.834 kb on + strand, within CA264_04260 at 985.835 kb on - strand, within CA264_04260 at 985.850 kb on - strand, within CA264_04260 at 985.960 kb on + strand, within CA264_04260 at 985.961 kb on - strand, within CA264_04260 at 985.961 kb on - strand, within CA264_04260 at 985.961 kb on - strand, within CA264_04260 at 985.961 kb on - strand, within CA264_04260 at 985.961 kb on - strand, within CA264_04260 at 985.965 kb on - strand, within CA264_04260 at 985.970 kb on + strand, within CA264_04260 at 985.971 kb on - strand, within CA264_04260 at 985.971 kb on - strand, within CA264_04260 at 986.035 kb on + strand at 986.232 kb on - strand at 986.234 kb on + strand at 986.234 kb on + strand at 986.234 kb on + strand at 986.235 kb on - strand at 986.235 kb on - strand at 986.235 kb on - strand at 986.235 kb on - strand at 986.239 kb on + strand at 986.240 kb on - strand at 986.240 kb on - strand at 986.348 kb on + strand at 986.349 kb on - strand at 986.387 kb on + strand at 986.388 kb on - strand at 986.388 kb on - strand at 986.389 kb on + strand at 986.389 kb on + strand at 986.390 kb on - strand at 986.393 kb on + strand at 986.394 kb on - strand at 986.461 kb on + strand at 986.462 kb on - strand at 986.463 kb on + strand at 986.463 kb on + strand at 986.464 kb on - strand at 986.464 kb on - strand at 986.464 kb on - strand at 986.471 kb on + strand at 986.472 kb on - strand at 986.483 kb on + strand at 986.483 kb on + strand at 986.483 kb on + strand at 986.484 kb on - strand at 986.484 kb on - strand at 986.484 kb on - strand at 986.484 kb on - strand at 986.684 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.729 kb on + strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.730 kb on - strand, within CA264_04265 at 986.734 kb on - strand, within CA264_04265 at 986.832 kb on + strand, within CA264_04265 at 986.887 kb on + strand, within CA264_04265 at 986.919 kb on - strand, within CA264_04265 at 987.059 kb on + strand at 987.135 kb on - strand at 987.146 kb on - strand at 987.164 kb on - strand at 987.164 kb on - strand at 987.164 kb on - strand at 987.166 kb on - strand at 987.166 kb on - strand at 987.168 kb on + strand at 987.168 kb on + strand at 987.169 kb on - strand at 987.206 kb on - strand at 987.265 kb on + strand, within CA264_04270 at 987.266 kb on - strand, within CA264_04270 at 987.266 kb on - strand, within CA264_04270 at 987.406 kb on + strand, within CA264_04270 at 987.508 kb on + strand, within CA264_04270 at 987.508 kb on + strand, within CA264_04270 at 987.509 kb on - strand, within CA264_04270 at 987.594 kb on + strand at 987.594 kb on + strand at 987.628 kb on - strand at 987.684 kb on + strand at 987.684 kb on + strand at 987.685 kb on - strand at 987.686 kb on + strand at 987.687 kb on - strand at 987.731 kb on + strand, within CA264_04275 at 987.731 kb on + strand, within CA264_04275 at 987.732 kb on - strand, within CA264_04275 at 987.748 kb on + strand, within CA264_04275 at 987.748 kb on + strand, within CA264_04275 at 987.749 kb on - strand, within CA264_04275 at 987.750 kb on + strand, within CA264_04275 at 987.757 kb on + strand, within CA264_04275 at 987.758 kb on - strand, within CA264_04275 at 987.826 kb on - strand, within CA264_04275 at 987.985 kb on + strand, within CA264_04275 at 988.028 kb on + strand, within CA264_04275 at 988.029 kb on - strand, within CA264_04275
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 985,513 - CA264_04260 0.60 +0.9 985,534 - CA264_04260 0.61 -0.8 985,534 - CA264_04260 0.61 -0.7 985,662 - CA264_04260 0.69 -0.5 985,792 + CA264_04260 0.76 +0.9 985,834 + CA264_04260 0.79 -0.3 985,835 - CA264_04260 0.79 +0.5 985,850 - CA264_04260 0.80 +0.4 985,960 + CA264_04260 0.86 +0.1 985,961 - CA264_04260 0.86 -0.5 985,961 - CA264_04260 0.86 -2.0 985,961 - CA264_04260 0.86 -0.7 985,961 - CA264_04260 0.86 -0.2 985,961 - CA264_04260 0.86 +0.2 985,965 - CA264_04260 0.86 +0.2 985,970 + CA264_04260 0.86 -1.0 985,971 - CA264_04260 0.86 -0.8 985,971 - CA264_04260 0.86 -0.5 986,035 + +0.9 986,232 - -0.8 986,234 + +0.5 986,234 + -1.7 986,234 + -0.2 986,235 - -0.9 986,235 - -0.4 986,235 - -0.7 986,235 - -0.7 986,239 + -0.5 986,240 - -0.9 986,240 - -0.3 986,348 + +0.6 986,349 - +0.1 986,387 + -0.1 986,388 - +0.0 986,388 - -1.1 986,389 + -0.0 986,389 + +0.7 986,390 - +0.3 986,393 + -0.5 986,394 - -1.1 986,461 + -0.7 986,462 - +0.2 986,463 + -1.4 986,463 + +0.2 986,464 - +0.2 986,464 - -0.4 986,464 - +0.3 986,471 + +1.1 986,472 - -0.5 986,483 + +0.2 986,483 + +0.1 986,483 + -0.5 986,484 - -0.1 986,484 - +0.0 986,484 - -0.9 986,484 - -0.5 986,684 + CA264_04265 0.32 +0.7 986,729 + CA264_04265 0.39 +0.6 986,729 + CA264_04265 0.39 -0.1 986,729 + CA264_04265 0.39 +1.9 986,729 + CA264_04265 0.39 +1.7 986,729 + CA264_04265 0.39 +1.1 986,729 + CA264_04265 0.39 +0.4 986,730 - CA264_04265 0.39 +0.1 986,730 - CA264_04265 0.39 -0.3 986,730 - CA264_04265 0.39 -0.3 986,730 - CA264_04265 0.39 +1.1 986,730 - CA264_04265 0.39 +0.0 986,734 - CA264_04265 0.39 -0.2 986,832 + CA264_04265 0.55 -0.3 986,887 + CA264_04265 0.63 +0.5 986,919 - CA264_04265 0.68 -0.3 987,059 + -2.8 987,135 - +0.2 987,146 - +0.6 987,164 - -0.8 987,164 - +0.2 987,164 - -0.4 987,166 - -0.2 987,166 - +0.0 987,168 + +1.9 987,168 + +0.1 987,169 - -0.1 987,206 - -0.3 987,265 + CA264_04270 0.21 +0.6 987,266 - CA264_04270 0.21 -0.1 987,266 - CA264_04270 0.21 -0.2 987,406 + CA264_04270 0.54 -0.2 987,508 + CA264_04270 0.77 +0.1 987,508 + CA264_04270 0.77 -0.3 987,509 - CA264_04270 0.78 +0.0 987,594 + +0.0 987,594 + -1.4 987,628 - -0.1 987,684 + -0.6 987,684 + +0.5 987,685 - +1.5 987,686 + -0.2 987,687 - -1.4 987,731 + CA264_04275 0.14 -1.1 987,731 + CA264_04275 0.14 -1.0 987,732 - CA264_04275 0.14 -0.0 987,748 + CA264_04275 0.18 -0.2 987,748 + CA264_04275 0.18 +2.5 987,749 - CA264_04275 0.18 -0.4 987,750 + CA264_04275 0.19 +0.1 987,757 + CA264_04275 0.20 +0.4 987,758 - CA264_04275 0.20 +1.2 987,826 - CA264_04275 0.36 -0.4 987,985 + CA264_04275 0.73 -0.2 988,028 + CA264_04275 0.83 -0.5 988,029 - CA264_04275 0.83 +0.2
Or see this region's nucleotide sequence