Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_04140 and CA264_04145 are separated by 15 nucleotides CA264_04145 and CA264_04150 are separated by 171 nucleotides CA264_04150 and CA264_04155 are separated by 235 nucleotides CA264_04155 and CA264_04160 are separated by 6 nucleotides
CA264_04140: CA264_04140 - cyanophycinase, at 958,225 to 959,118
_04140
CA264_04145: CA264_04145 - hypothetical protein, at 959,134 to 959,526
_04145
CA264_04150: CA264_04150 - hypothetical protein, at 959,698 to 959,985
_04150
CA264_04155: CA264_04155 - hypothetical protein, at 960,221 to 960,670
_04155
CA264_04160: CA264_04160 - hypothetical protein, at 960,677 to 960,901
_04160
Position (kb) 959
960 Strain fitness (log2 ratio) -2
-1
0
1
2 at 958.738 kb on + strand, within CA264_04140 at 958.738 kb on + strand, within CA264_04140 at 958.890 kb on + strand, within CA264_04140 at 958.891 kb on - strand, within CA264_04140 at 958.892 kb on + strand, within CA264_04140 at 958.893 kb on - strand, within CA264_04140 at 958.896 kb on + strand, within CA264_04140 at 958.924 kb on + strand, within CA264_04140 at 958.925 kb on - strand, within CA264_04140 at 959.083 kb on + strand at 959.084 kb on - strand at 959.094 kb on + strand at 959.094 kb on + strand at 959.123 kb on + strand at 959.141 kb on - strand at 959.158 kb on - strand at 959.160 kb on - strand at 959.160 kb on - strand at 959.276 kb on + strand, within CA264_04145 at 959.285 kb on + strand, within CA264_04145 at 959.298 kb on - strand, within CA264_04145 at 959.298 kb on - strand, within CA264_04145 at 959.337 kb on - strand, within CA264_04145 at 959.399 kb on - strand, within CA264_04145 at 959.431 kb on + strand, within CA264_04145 at 959.432 kb on - strand, within CA264_04145 at 959.637 kb on + strand at 959.638 kb on - strand at 959.683 kb on + strand at 959.688 kb on - strand at 959.804 kb on + strand, within CA264_04150 at 959.876 kb on + strand, within CA264_04150 at 959.877 kb on - strand, within CA264_04150 at 959.877 kb on - strand, within CA264_04150 at 960.047 kb on + strand at 960.047 kb on + strand at 960.078 kb on - strand at 960.081 kb on - strand at 960.125 kb on + strand at 960.125 kb on + strand at 960.126 kb on - strand at 960.193 kb on + strand at 960.217 kb on - strand at 960.217 kb on - strand at 960.266 kb on + strand, within CA264_04155 at 960.299 kb on + strand, within CA264_04155 at 960.339 kb on + strand, within CA264_04155 at 960.339 kb on + strand, within CA264_04155 at 960.394 kb on + strand, within CA264_04155 at 960.395 kb on - strand, within CA264_04155 at 960.439 kb on + strand, within CA264_04155 at 960.439 kb on + strand, within CA264_04155 at 960.440 kb on - strand, within CA264_04155 at 960.440 kb on - strand, within CA264_04155 at 960.471 kb on - strand, within CA264_04155 at 960.621 kb on - strand, within CA264_04155 at 960.685 kb on - strand at 960.691 kb on - strand at 960.724 kb on + strand, within CA264_04160 at 960.728 kb on + strand, within CA264_04160 at 960.728 kb on + strand, within CA264_04160 at 960.728 kb on + strand, within CA264_04160 at 960.729 kb on - strand, within CA264_04160 at 960.729 kb on - strand, within CA264_04160 at 960.872 kb on + strand, within CA264_04160 at 960.873 kb on - strand, within CA264_04160 at 960.873 kb on - strand, within CA264_04160 at 960.877 kb on - strand, within CA264_04160 at 960.877 kb on - strand, within CA264_04160 at 960.877 kb on - strand, within CA264_04160 at 960.911 kb on - strand at 960.912 kb on + strand at 960.913 kb on - strand at 960.918 kb on + strand at 960.918 kb on + strand at 960.928 kb on + strand at 960.928 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 958,738 + CA264_04140 0.57 -0.4 958,738 + CA264_04140 0.57 +2.5 958,890 + CA264_04140 0.74 +0.4 958,891 - CA264_04140 0.74 +0.9 958,892 + CA264_04140 0.75 -0.7 958,893 - CA264_04140 0.75 +0.2 958,896 + CA264_04140 0.75 +0.9 958,924 + CA264_04140 0.78 +0.3 958,925 - CA264_04140 0.78 +0.6 959,083 + -0.9 959,084 - -0.4 959,094 + -0.5 959,094 + +1.1 959,123 + +0.0 959,141 - -0.7 959,158 - -2.0 959,160 - +0.3 959,160 - +0.6 959,276 + CA264_04145 0.36 -0.1 959,285 + CA264_04145 0.38 -1.7 959,298 - CA264_04145 0.42 -1.7 959,298 - CA264_04145 0.42 +1.6 959,337 - CA264_04145 0.52 +0.5 959,399 - CA264_04145 0.67 -0.8 959,431 + CA264_04145 0.76 -0.2 959,432 - CA264_04145 0.76 -0.8 959,637 + +0.5 959,638 - -0.4 959,683 + +0.4 959,688 - -0.4 959,804 + CA264_04150 0.37 -1.4 959,876 + CA264_04150 0.62 -0.8 959,877 - CA264_04150 0.62 -0.5 959,877 - CA264_04150 0.62 +0.2 960,047 + -0.3 960,047 + +0.1 960,078 - +0.1 960,081 - -0.5 960,125 + +0.7 960,125 + +1.4 960,126 - +0.2 960,193 + +0.1 960,217 - +2.2 960,217 - +0.6 960,266 + CA264_04155 0.10 -0.9 960,299 + CA264_04155 0.17 +0.3 960,339 + CA264_04155 0.26 -0.2 960,339 + CA264_04155 0.26 -0.1 960,394 + CA264_04155 0.38 +0.6 960,395 - CA264_04155 0.39 +0.6 960,439 + CA264_04155 0.48 -1.2 960,439 + CA264_04155 0.48 +1.2 960,440 - CA264_04155 0.49 -0.5 960,440 - CA264_04155 0.49 +0.6 960,471 - CA264_04155 0.56 +0.7 960,621 - CA264_04155 0.89 -0.1 960,685 - -1.7 960,691 - -0.2 960,724 + CA264_04160 0.21 +1.1 960,728 + CA264_04160 0.23 +0.9 960,728 + CA264_04160 0.23 -0.5 960,728 + CA264_04160 0.23 -0.4 960,729 - CA264_04160 0.23 +0.1 960,729 - CA264_04160 0.23 -2.0 960,872 + CA264_04160 0.87 -0.3 960,873 - CA264_04160 0.87 +0.3 960,873 - CA264_04160 0.87 +0.4 960,877 - CA264_04160 0.89 -0.1 960,877 - CA264_04160 0.89 +0.3 960,877 - CA264_04160 0.89 -0.1 960,911 - -0.7 960,912 + -0.1 960,913 - +0.1 960,918 + +0.1 960,918 + -1.2 960,928 + -0.0 960,928 + -0.7
Or see this region's nucleotide sequence