Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03545 and CA264_03550 are separated by 537 nucleotides CA264_03550 and CA264_03555 are separated by 187 nucleotides CA264_03555 and CA264_03560 are separated by 370 nucleotides
CA264_03545: CA264_03545 - acylase, at 824,944 to 827,148
_03545
CA264_03550: CA264_03550 - hypothetical protein, at 827,686 to 828,303
_03550
CA264_03555: CA264_03555 - hypothetical protein, at 828,491 to 828,916
_03555
CA264_03560: CA264_03560 - hypothetical protein, at 829,287 to 829,616
_03560
Position (kb) 827
828
829 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 826.811 kb on + strand, within CA264_03545 at 826.811 kb on + strand, within CA264_03545 at 826.811 kb on + strand, within CA264_03545 at 826.811 kb on + strand, within CA264_03545 at 826.812 kb on - strand, within CA264_03545 at 826.812 kb on - strand, within CA264_03545 at 826.812 kb on - strand, within CA264_03545 at 826.842 kb on + strand, within CA264_03545 at 826.899 kb on + strand, within CA264_03545 at 826.900 kb on - strand, within CA264_03545 at 826.900 kb on - strand, within CA264_03545 at 826.900 kb on - strand, within CA264_03545 at 826.903 kb on + strand, within CA264_03545 at 826.903 kb on + strand, within CA264_03545 at 826.903 kb on + strand, within CA264_03545 at 826.903 kb on + strand, within CA264_03545 at 826.904 kb on - strand, within CA264_03545 at 827.050 kb on + strand at 827.080 kb on + strand at 827.081 kb on - strand at 827.120 kb on - strand at 827.156 kb on + strand at 827.230 kb on + strand at 827.231 kb on - strand at 827.231 kb on - strand at 827.231 kb on - strand at 827.254 kb on + strand at 827.255 kb on - strand at 827.255 kb on - strand at 827.300 kb on - strand at 827.383 kb on + strand at 827.383 kb on + strand at 827.386 kb on - strand at 827.434 kb on + strand at 827.435 kb on - strand at 827.491 kb on - strand at 827.505 kb on - strand at 827.505 kb on - strand at 827.513 kb on + strand at 827.514 kb on - strand at 827.514 kb on - strand at 827.514 kb on - strand at 827.514 kb on - strand at 827.528 kb on + strand at 827.546 kb on - strand at 827.547 kb on + strand at 827.590 kb on - strand at 827.595 kb on - strand at 827.648 kb on - strand at 827.648 kb on - strand at 827.654 kb on + strand at 827.656 kb on + strand at 827.666 kb on + strand at 827.673 kb on + strand at 827.738 kb on - strand at 827.772 kb on + strand, within CA264_03550 at 827.780 kb on - strand, within CA264_03550 at 827.781 kb on + strand, within CA264_03550 at 827.782 kb on - strand, within CA264_03550 at 827.782 kb on - strand, within CA264_03550 at 827.810 kb on + strand, within CA264_03550 at 827.814 kb on - strand, within CA264_03550 at 827.817 kb on + strand, within CA264_03550 at 827.817 kb on + strand, within CA264_03550 at 827.818 kb on - strand, within CA264_03550 at 827.818 kb on - strand, within CA264_03550 at 827.818 kb on - strand, within CA264_03550 at 827.821 kb on - strand, within CA264_03550 at 827.830 kb on - strand, within CA264_03550 at 827.873 kb on - strand, within CA264_03550 at 827.874 kb on + strand, within CA264_03550 at 827.926 kb on - strand, within CA264_03550 at 827.943 kb on + strand, within CA264_03550 at 827.949 kb on + strand, within CA264_03550 at 827.965 kb on - strand, within CA264_03550 at 827.969 kb on - strand, within CA264_03550 at 827.969 kb on - strand, within CA264_03550 at 827.969 kb on - strand, within CA264_03550 at 827.969 kb on - strand, within CA264_03550 at 827.969 kb on - strand, within CA264_03550 at 828.003 kb on + strand, within CA264_03550 at 828.009 kb on - strand, within CA264_03550 at 828.038 kb on + strand, within CA264_03550 at 828.086 kb on - strand, within CA264_03550 at 828.144 kb on - strand, within CA264_03550 at 828.144 kb on - strand, within CA264_03550 at 828.144 kb on - strand, within CA264_03550 at 828.214 kb on + strand, within CA264_03550 at 828.214 kb on + strand, within CA264_03550 at 828.218 kb on - strand, within CA264_03550 at 828.236 kb on - strand, within CA264_03550 at 828.236 kb on - strand, within CA264_03550 at 828.269 kb on + strand at 828.270 kb on - strand at 828.276 kb on + strand at 828.301 kb on + strand at 828.302 kb on - strand at 828.307 kb on + strand at 828.308 kb on - strand at 828.324 kb on + strand at 828.324 kb on + strand at 828.325 kb on - strand at 828.328 kb on + strand at 828.329 kb on - strand at 828.364 kb on - strand at 828.371 kb on - strand at 828.406 kb on + strand at 828.467 kb on + strand at 828.468 kb on - strand at 828.469 kb on + strand at 828.469 kb on + strand at 828.470 kb on - strand at 828.494 kb on + strand at 828.496 kb on + strand at 828.497 kb on - strand at 828.497 kb on - strand at 828.512 kb on - strand at 828.540 kb on + strand, within CA264_03555 at 828.541 kb on - strand, within CA264_03555 at 828.541 kb on - strand, within CA264_03555 at 828.544 kb on + strand, within CA264_03555 at 828.545 kb on - strand, within CA264_03555 at 828.545 kb on - strand, within CA264_03555 at 828.558 kb on + strand, within CA264_03555 at 828.558 kb on + strand, within CA264_03555 at 828.558 kb on + strand, within CA264_03555 at 828.559 kb on - strand, within CA264_03555 at 828.565 kb on + strand, within CA264_03555 at 828.566 kb on - strand, within CA264_03555 at 828.566 kb on - strand, within CA264_03555 at 828.600 kb on - strand, within CA264_03555 at 828.603 kb on + strand, within CA264_03555 at 828.604 kb on - strand, within CA264_03555 at 828.687 kb on - strand, within CA264_03555 at 828.710 kb on + strand, within CA264_03555 at 828.711 kb on - strand, within CA264_03555 at 828.787 kb on + strand, within CA264_03555 at 828.819 kb on - strand, within CA264_03555 at 828.819 kb on - strand, within CA264_03555 at 828.832 kb on - strand, within CA264_03555 at 828.871 kb on - strand, within CA264_03555 at 828.871 kb on - strand, within CA264_03555 at 828.871 kb on - strand, within CA264_03555 at 828.876 kb on - strand at 828.945 kb on - strand at 828.951 kb on + strand at 829.028 kb on - strand at 829.047 kb on + strand at 829.055 kb on + strand at 829.055 kb on + strand at 829.119 kb on + strand at 829.119 kb on + strand at 829.120 kb on - strand at 829.120 kb on - strand at 829.123 kb on - strand at 829.123 kb on - strand at 829.123 kb on - strand at 829.146 kb on + strand at 829.164 kb on + strand at 829.164 kb on + strand at 829.164 kb on + strand at 829.165 kb on - strand at 829.191 kb on + strand at 829.192 kb on - strand at 829.225 kb on + strand at 829.266 kb on - strand at 829.267 kb on + strand at 829.268 kb on - strand at 829.268 kb on - strand at 829.274 kb on - strand at 829.286 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 826,811 + CA264_03545 0.85 -0.6 826,811 + CA264_03545 0.85 +0.9 826,811 + CA264_03545 0.85 -1.0 826,811 + CA264_03545 0.85 -1.2 826,812 - CA264_03545 0.85 -0.8 826,812 - CA264_03545 0.85 -0.6 826,812 - CA264_03545 0.85 -1.1 826,842 + CA264_03545 0.86 +0.6 826,899 + CA264_03545 0.89 -0.6 826,900 - CA264_03545 0.89 -0.1 826,900 - CA264_03545 0.89 -0.7 826,900 - CA264_03545 0.89 -1.1 826,903 + CA264_03545 0.89 +0.9 826,903 + CA264_03545 0.89 +0.0 826,903 + CA264_03545 0.89 +0.1 826,903 + CA264_03545 0.89 -0.7 826,904 - CA264_03545 0.89 -0.7 827,050 + -0.0 827,080 + +0.2 827,081 - -0.3 827,120 - -0.0 827,156 + +0.7 827,230 + -1.1 827,231 - +0.1 827,231 - -0.7 827,231 - -0.4 827,254 + +0.2 827,255 - -2.6 827,255 - +0.5 827,300 - -0.5 827,383 + -1.4 827,383 + -0.1 827,386 - -0.7 827,434 + -1.0 827,435 - -0.1 827,491 - -0.1 827,505 - +0.2 827,505 - -0.4 827,513 + +0.1 827,514 - -0.2 827,514 - +0.2 827,514 - -1.2 827,514 - -0.1 827,528 + +0.1 827,546 - +1.3 827,547 + -0.2 827,590 - +2.5 827,595 - +0.5 827,648 - +0.0 827,648 - -0.7 827,654 + +0.5 827,656 + +1.5 827,666 + -0.6 827,673 + +0.2 827,738 - -0.0 827,772 + CA264_03550 0.14 +0.9 827,780 - CA264_03550 0.15 -1.2 827,781 + CA264_03550 0.15 -0.2 827,782 - CA264_03550 0.16 +0.9 827,782 - CA264_03550 0.16 -0.6 827,810 + CA264_03550 0.20 +1.2 827,814 - CA264_03550 0.21 -0.1 827,817 + CA264_03550 0.21 -0.9 827,817 + CA264_03550 0.21 -0.3 827,818 - CA264_03550 0.21 -1.3 827,818 - CA264_03550 0.21 -1.9 827,818 - CA264_03550 0.21 -0.2 827,821 - CA264_03550 0.22 -0.1 827,830 - CA264_03550 0.23 -0.9 827,873 - CA264_03550 0.30 -1.0 827,874 + CA264_03550 0.30 +0.7 827,926 - CA264_03550 0.39 +0.9 827,943 + CA264_03550 0.42 -0.1 827,949 + CA264_03550 0.43 -1.5 827,965 - CA264_03550 0.45 -0.4 827,969 - CA264_03550 0.46 -0.8 827,969 - CA264_03550 0.46 +0.1 827,969 - CA264_03550 0.46 -1.4 827,969 - CA264_03550 0.46 +0.9 827,969 - CA264_03550 0.46 -0.4 828,003 + CA264_03550 0.51 -0.8 828,009 - CA264_03550 0.52 +1.9 828,038 + CA264_03550 0.57 -0.7 828,086 - CA264_03550 0.65 +0.4 828,144 - CA264_03550 0.74 -0.5 828,144 - CA264_03550 0.74 +0.2 828,144 - CA264_03550 0.74 +0.0 828,214 + CA264_03550 0.85 +0.2 828,214 + CA264_03550 0.85 -0.0 828,218 - CA264_03550 0.86 -0.6 828,236 - CA264_03550 0.89 -0.0 828,236 - CA264_03550 0.89 -1.4 828,269 + -0.0 828,270 - +0.5 828,276 + +1.3 828,301 + +0.7 828,302 - -1.1 828,307 + -1.9 828,308 - -0.3 828,324 + +0.3 828,324 + -0.1 828,325 - +0.6 828,328 + -0.2 828,329 - -0.1 828,364 - -0.7 828,371 - +0.1 828,406 + +2.9 828,467 + +0.9 828,468 - -0.1 828,469 + -0.5 828,469 + -0.1 828,470 - -0.2 828,494 + -0.2 828,496 + -0.4 828,497 - -0.1 828,497 - +1.1 828,512 - -1.9 828,540 + CA264_03555 0.12 -0.9 828,541 - CA264_03555 0.12 +0.3 828,541 - CA264_03555 0.12 -1.1 828,544 + CA264_03555 0.12 -0.4 828,545 - CA264_03555 0.13 -0.1 828,545 - CA264_03555 0.13 -0.2 828,558 + CA264_03555 0.16 -0.1 828,558 + CA264_03555 0.16 -0.1 828,558 + CA264_03555 0.16 -1.9 828,559 - CA264_03555 0.16 -0.3 828,565 + CA264_03555 0.17 +0.9 828,566 - CA264_03555 0.18 -0.7 828,566 - CA264_03555 0.18 -0.5 828,600 - CA264_03555 0.26 +1.5 828,603 + CA264_03555 0.26 +0.7 828,604 - CA264_03555 0.27 +0.2 828,687 - CA264_03555 0.46 +0.5 828,710 + CA264_03555 0.51 -0.3 828,711 - CA264_03555 0.52 +0.9 828,787 + CA264_03555 0.69 -0.7 828,819 - CA264_03555 0.77 -1.0 828,819 - CA264_03555 0.77 +0.3 828,832 - CA264_03555 0.80 -0.3 828,871 - CA264_03555 0.89 -0.4 828,871 - CA264_03555 0.89 +0.1 828,871 - CA264_03555 0.89 -0.1 828,876 - +0.0 828,945 - -0.7 828,951 + -0.3 829,028 - +1.9 829,047 + -0.9 829,055 + -0.8 829,055 + +2.9 829,119 + -0.5 829,119 + +0.1 829,120 - -0.8 829,120 - -1.1 829,123 - -1.0 829,123 - -0.1 829,123 - +0.6 829,146 + -0.3 829,164 + -0.0 829,164 + +1.9 829,164 + -0.4 829,165 - -1.1 829,191 + -0.1 829,192 - +0.2 829,225 + -0.8 829,266 - -0.5 829,267 + -1.9 829,268 - -0.2 829,268 - -0.6 829,274 - -0.6 829,286 - -0.1
Or see this region's nucleotide sequence