Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03435 and CA264_03440 are separated by 246 nucleotides CA264_03440 and CA264_03445 are separated by 341 nucleotides
CA264_03435: CA264_03435 - hypothetical protein, at 800,647 to 801,348
_03435
CA264_03440: CA264_03440 - DoxX family protein, at 801,595 to 801,993
_03440
CA264_03445: CA264_03445 - anhydro-N-acetylmuramic acid kinase, at 802,335 to 803,534
_03445
Position (kb) 801
802 Strain fitness (log2 ratio) -2
-1
0
1
2 at 800.614 kb on - strand at 800.618 kb on + strand at 800.618 kb on + strand at 800.619 kb on - strand at 800.619 kb on - strand at 800.621 kb on - strand at 800.658 kb on + strand at 800.811 kb on - strand, within CA264_03435 at 800.846 kb on - strand, within CA264_03435 at 800.857 kb on + strand, within CA264_03435 at 800.977 kb on + strand, within CA264_03435 at 801.040 kb on + strand, within CA264_03435 at 801.041 kb on - strand, within CA264_03435 at 801.043 kb on + strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.128 kb on + strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.183 kb on + strand, within CA264_03435 at 801.195 kb on + strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.287 kb on + strand at 801.288 kb on - strand at 801.401 kb on + strand at 801.427 kb on + strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.429 kb on + strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.475 kb on - strand at 801.489 kb on + strand at 801.489 kb on + strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.498 kb on - strand at 801.547 kb on + strand at 801.549 kb on + strand at 801.553 kb on + strand at 801.554 kb on - strand at 801.554 kb on - strand at 801.567 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.666 kb on + strand, within CA264_03440 at 801.667 kb on - strand, within CA264_03440 at 801.775 kb on - strand, within CA264_03440 at 801.907 kb on + strand, within CA264_03440 at 801.908 kb on - strand, within CA264_03440 at 801.925 kb on + strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.984 kb on + strand at 802.004 kb on + strand at 802.010 kb on + strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.013 kb on + strand at 802.014 kb on - strand at 802.074 kb on - strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.110 kb on + strand at 802.111 kb on - strand at 802.111 kb on - strand at 802.117 kb on - strand at 802.117 kb on - strand at 802.217 kb on - strand at 802.229 kb on + strand at 802.230 kb on - strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.232 kb on - strand at 802.238 kb on + strand at 802.238 kb on + strand at 802.324 kb on + strand at 802.324 kb on + strand at 802.325 kb on - strand at 802.334 kb on + strand at 802.335 kb on - strand at 802.388 kb on + strand at 802.433 kb on - strand at 802.433 kb on - strand at 802.536 kb on - strand, within CA264_03445 at 802.587 kb on + strand, within CA264_03445 at 802.588 kb on - strand, within CA264_03445 at 802.588 kb on - strand, within CA264_03445 at 802.689 kb on + strand, within CA264_03445 at 802.690 kb on - strand, within CA264_03445 at 802.690 kb on - strand, within CA264_03445 at 802.690 kb on - strand at 802.712 kb on + strand, within CA264_03445 at 802.712 kb on + strand, within CA264_03445 at 802.713 kb on - strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.717 kb on + strand, within CA264_03445 at 802.742 kb on - strand, within CA264_03445 at 802.742 kb on - strand, within CA264_03445 at 802.747 kb on + strand, within CA264_03445 at 802.747 kb on + strand, within CA264_03445 at 802.748 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.787 kb on - strand, within CA264_03445 at 802.861 kb on - strand, within CA264_03445 at 802.901 kb on + strand, within CA264_03445 at 802.901 kb on + strand, within CA264_03445 at 802.950 kb on - strand, within CA264_03445 at 802.993 kb on + strand, within CA264_03445
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 800,614 - +0.2 800,618 + +0.3 800,618 + +0.9 800,619 - -0.4 800,619 - -0.3 800,621 - -1.1 800,658 + -0.7 800,811 - CA264_03435 0.23 +0.0 800,846 - CA264_03435 0.28 +0.8 800,857 + CA264_03435 0.30 +0.2 800,977 + CA264_03435 0.47 +0.2 801,040 + CA264_03435 0.56 -0.3 801,041 - CA264_03435 0.56 +0.5 801,043 + CA264_03435 0.56 -0.0 801,080 - CA264_03435 0.62 +0.3 801,080 - CA264_03435 0.62 +0.4 801,128 + CA264_03435 0.69 +1.1 801,129 - CA264_03435 0.69 -0.2 801,129 - CA264_03435 0.69 -0.3 801,129 - CA264_03435 0.69 -1.3 801,183 + CA264_03435 0.76 -0.5 801,195 + CA264_03435 0.78 -0.5 801,196 - CA264_03435 0.78 +0.0 801,196 - CA264_03435 0.78 -0.3 801,287 + -0.5 801,288 - -0.9 801,401 + +0.5 801,427 + +0.7 801,428 - +1.2 801,428 - -2.1 801,428 - -0.3 801,429 + +1.9 801,430 - -0.2 801,430 - +0.9 801,430 - +0.4 801,475 - -1.0 801,489 + +0.1 801,489 + +0.7 801,490 - -0.4 801,490 - +0.6 801,490 - +0.7 801,490 - +0.0 801,498 - -1.4 801,547 + +0.4 801,549 + -0.7 801,553 + +0.9 801,554 - +0.6 801,554 - +0.3 801,567 + +0.3 801,604 + -1.4 801,604 + +0.5 801,604 + +0.2 801,604 + +0.0 801,666 + CA264_03440 0.18 -0.1 801,667 - CA264_03440 0.18 -0.3 801,775 - CA264_03440 0.45 -0.4 801,907 + CA264_03440 0.78 -0.3 801,908 - CA264_03440 0.78 -0.3 801,925 + CA264_03440 0.83 -0.5 801,926 - CA264_03440 0.83 -0.6 801,926 - CA264_03440 0.83 -0.7 801,984 + -0.6 802,004 + -0.6 802,010 + -0.7 802,011 - +0.7 802,011 - -0.4 802,011 - +0.1 802,013 + -0.2 802,014 - +0.2 802,074 - -1.9 802,077 + +0.4 802,077 + -0.3 802,077 + +0.4 802,077 + +0.2 802,077 + -1.1 802,078 - -0.6 802,078 - -0.3 802,078 - +0.0 802,110 + +1.5 802,111 - -1.6 802,111 - +0.5 802,117 - -0.0 802,117 - +0.3 802,217 - +1.5 802,229 + +0.5 802,230 - -0.4 802,231 + -0.7 802,231 + +0.0 802,231 + +0.5 802,232 - +0.0 802,238 + -0.3 802,238 + -0.2 802,324 + +0.4 802,324 + +0.9 802,325 - -0.3 802,334 + +1.7 802,335 - -1.4 802,388 + -1.1 802,433 - -1.3 802,433 - +0.5 802,536 - CA264_03445 0.17 -0.3 802,587 + CA264_03445 0.21 -0.9 802,588 - CA264_03445 0.21 +1.5 802,588 - CA264_03445 0.21 -1.0 802,689 + CA264_03445 0.29 +1.0 802,690 - CA264_03445 0.30 -0.1 802,690 - CA264_03445 0.30 +0.6 802,690 - -0.1 802,712 + CA264_03445 0.31 +0.5 802,712 + CA264_03445 0.31 -0.4 802,713 - CA264_03445 0.32 +0.2 802,717 + CA264_03445 0.32 +0.3 802,717 + CA264_03445 0.32 +0.5 802,717 + CA264_03445 0.32 -1.0 802,742 - CA264_03445 0.34 +1.9 802,742 - CA264_03445 0.34 -0.5 802,747 + CA264_03445 0.34 +0.6 802,747 + CA264_03445 0.34 +0.3 802,748 - CA264_03445 0.34 +1.6 802,787 - CA264_03445 0.38 +0.1 802,787 - CA264_03445 0.38 -0.9 802,787 - CA264_03445 0.38 -0.5 802,861 - CA264_03445 0.44 -0.1 802,901 + CA264_03445 0.47 -0.3 802,901 + CA264_03445 0.47 -1.4 802,950 - CA264_03445 0.51 -0.1 802,993 + CA264_03445 0.55 +0.1
Or see this region's nucleotide sequence