Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02645 and CA264_02650 are separated by 122 nucleotides CA264_02650 and CA264_02655 are separated by 283 nucleotides
CA264_02645: CA264_02645 - hypothetical protein, at 612,409 to 612,795
_02645
CA264_02650: CA264_02650 - DNA topoisomerase III, at 612,918 to 615,365
_02650
CA264_02655: CA264_02655 - hypothetical protein, at 615,649 to 616,494
_02655
Position (kb) 612
613
614
615
616 Strain fitness (log2 ratio) -2
-1
0
1
2 at 611.919 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.985 kb on + strand at 611.986 kb on - strand at 611.986 kb on - strand at 611.990 kb on + strand at 611.990 kb on + strand at 612.017 kb on + strand at 612.042 kb on + strand at 612.047 kb on + strand at 612.140 kb on - strand at 612.157 kb on + strand at 612.159 kb on + strand at 612.319 kb on - strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.346 kb on + strand at 612.347 kb on - strand at 612.347 kb on - strand at 612.383 kb on - strand at 612.391 kb on - strand at 612.394 kb on - strand at 612.420 kb on + strand at 612.420 kb on + strand at 612.435 kb on + strand at 612.435 kb on + strand at 612.459 kb on - strand, within CA264_02645 at 612.459 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.504 kb on - strand, within CA264_02645 at 612.509 kb on + strand, within CA264_02645 at 612.580 kb on - strand, within CA264_02645 at 612.643 kb on - strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.687 kb on + strand, within CA264_02645 at 612.721 kb on + strand, within CA264_02645 at 612.722 kb on - strand, within CA264_02645 at 612.723 kb on + strand, within CA264_02645 at 612.728 kb on + strand, within CA264_02645 at 612.753 kb on + strand, within CA264_02645 at 612.754 kb on - strand, within CA264_02645 at 612.763 kb on - strand at 612.794 kb on - strand at 612.794 kb on - strand at 612.854 kb on + strand at 612.855 kb on - strand at 612.933 kb on + strand at 612.995 kb on + strand at 612.996 kb on - strand at 613.255 kb on + strand, within CA264_02650 at 613.351 kb on + strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.586 kb on - strand, within CA264_02650 at 613.612 kb on - strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.792 kb on + strand, within CA264_02650 at 613.793 kb on - strand, within CA264_02650 at 613.936 kb on + strand, within CA264_02650 at 614.139 kb on - strand, within CA264_02650 at 614.180 kb on + strand, within CA264_02650 at 614.181 kb on - strand, within CA264_02650 at 614.369 kb on + strand, within CA264_02650 at 614.372 kb on - strand, within CA264_02650 at 614.372 kb on - strand, within CA264_02650 at 614.372 kb on - strand, within CA264_02650 at 614.411 kb on - strand, within CA264_02650 at 614.415 kb on - strand, within CA264_02650 at 614.676 kb on - strand, within CA264_02650 at 615.004 kb on + strand, within CA264_02650 at 615.005 kb on - strand, within CA264_02650 at 615.005 kb on - strand, within CA264_02650 at 615.033 kb on + strand, within CA264_02650 at 615.033 kb on + strand, within CA264_02650 at 615.034 kb on - strand, within CA264_02650 at 615.181 kb on + strand at 615.257 kb on + strand at 615.258 kb on - strand at 615.265 kb on + strand at 615.280 kb on + strand at 615.281 kb on - strand at 615.281 kb on - strand at 615.284 kb on - strand at 615.382 kb on + strand at 615.383 kb on - strand at 615.390 kb on - strand at 615.443 kb on + strand at 615.443 kb on + strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.444 kb on - strand at 615.445 kb on + strand at 615.445 kb on + strand at 615.445 kb on + strand at 615.446 kb on - strand at 615.446 kb on - strand at 615.446 kb on - strand at 615.473 kb on - strand at 615.579 kb on + strand at 615.617 kb on + strand at 615.617 kb on + strand at 615.688 kb on + strand at 615.688 kb on + strand at 615.714 kb on + strand at 615.716 kb on + strand at 615.717 kb on - strand at 615.717 kb on - strand at 615.780 kb on - strand, within CA264_02655 at 615.780 kb on - strand, within CA264_02655 at 615.830 kb on + strand, within CA264_02655 at 615.846 kb on - strand, within CA264_02655 at 616.002 kb on + strand, within CA264_02655 at 616.010 kb on + strand, within CA264_02655 at 616.011 kb on - strand, within CA264_02655 at 616.024 kb on - strand, within CA264_02655 at 616.042 kb on + strand, within CA264_02655 at 616.042 kb on + strand, within CA264_02655 at 616.043 kb on - strand, within CA264_02655 at 616.095 kb on + strand, within CA264_02655 at 616.105 kb on + strand, within CA264_02655 at 616.105 kb on + strand, within CA264_02655 at 616.105 kb on + strand, within CA264_02655 at 616.105 kb on + strand, within CA264_02655 at 616.106 kb on - strand, within CA264_02655 at 616.115 kb on - strand, within CA264_02655 at 616.154 kb on + strand, within CA264_02655 at 616.238 kb on - strand, within CA264_02655 at 616.315 kb on - strand, within CA264_02655
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 611,919 + +0.1 611,985 + -0.4 611,985 + -0.3 611,985 + +0.9 611,985 + -0.2 611,986 - +0.1 611,986 - +2.5 611,990 + +1.7 611,990 + +1.0 612,017 + +1.2 612,042 + +0.5 612,047 + +0.3 612,140 - +1.2 612,157 + -0.2 612,159 + -0.1 612,319 - +0.9 612,346 + +1.6 612,346 + +0.5 612,346 + -0.1 612,346 + -0.3 612,347 - -0.0 612,347 - -1.4 612,383 - -0.5 612,391 - -0.9 612,394 - -0.1 612,420 + -0.1 612,420 + -0.5 612,435 + +0.9 612,435 + -0.7 612,459 - CA264_02645 0.13 +0.0 612,459 - CA264_02645 0.13 +0.2 612,504 - CA264_02645 0.25 -0.2 612,504 - CA264_02645 0.25 -2.1 612,504 - CA264_02645 0.25 -0.3 612,509 + CA264_02645 0.26 +0.1 612,580 - CA264_02645 0.44 +0.1 612,643 - CA264_02645 0.60 +1.6 612,687 + CA264_02645 0.72 +1.0 612,687 + CA264_02645 0.72 -1.4 612,721 + CA264_02645 0.81 -0.7 612,722 - CA264_02645 0.81 +0.4 612,723 + CA264_02645 0.81 -0.1 612,728 + CA264_02645 0.82 -0.1 612,753 + CA264_02645 0.89 +0.6 612,754 - CA264_02645 0.89 -0.3 612,763 - -0.4 612,794 - -0.6 612,794 - +0.1 612,854 + -1.1 612,855 - -0.7 612,933 + -0.6 612,995 + +0.3 612,996 - -0.9 613,255 + CA264_02650 0.14 -1.1 613,351 + CA264_02650 0.18 -0.3 613,586 - CA264_02650 0.27 -0.6 613,586 - CA264_02650 0.27 -0.9 613,612 - CA264_02650 0.28 -0.1 613,792 + CA264_02650 0.36 +0.1 613,792 + CA264_02650 0.36 -0.8 613,792 + CA264_02650 0.36 -0.1 613,792 + CA264_02650 0.36 -1.2 613,793 - CA264_02650 0.36 -0.6 613,936 + CA264_02650 0.42 -0.4 614,139 - CA264_02650 0.50 -1.1 614,180 + CA264_02650 0.52 -0.1 614,181 - CA264_02650 0.52 -0.7 614,369 + CA264_02650 0.59 -0.7 614,372 - CA264_02650 0.59 -0.3 614,372 - CA264_02650 0.59 -1.5 614,372 - CA264_02650 0.59 +0.3 614,411 - CA264_02650 0.61 -1.0 614,415 - CA264_02650 0.61 -0.6 614,676 - CA264_02650 0.72 -0.7 615,004 + CA264_02650 0.85 -0.7 615,005 - CA264_02650 0.85 +0.9 615,005 - CA264_02650 0.85 -0.6 615,033 + CA264_02650 0.86 -1.7 615,033 + CA264_02650 0.86 -0.2 615,034 - CA264_02650 0.86 -1.5 615,181 + -0.8 615,257 + -0.1 615,258 - -0.4 615,265 + -1.4 615,280 + -1.1 615,281 - -0.9 615,281 - -1.1 615,284 - -0.9 615,382 + +0.3 615,383 - +0.4 615,390 - -0.4 615,443 + -0.1 615,443 + -0.5 615,444 - -1.4 615,444 - +1.5 615,444 - +0.9 615,444 - -1.4 615,444 - -0.5 615,444 - -0.5 615,444 - +0.2 615,444 - +0.6 615,445 + -0.2 615,445 + -0.1 615,445 + +0.9 615,446 - -1.7 615,446 - +0.0 615,446 - -0.1 615,473 - -0.0 615,579 + +0.3 615,617 + -0.0 615,617 + +0.2 615,688 + +1.1 615,688 + -0.8 615,714 + +0.4 615,716 + +0.4 615,717 - +1.5 615,717 - -0.8 615,780 - CA264_02655 0.15 -0.8 615,780 - CA264_02655 0.15 -1.0 615,830 + CA264_02655 0.21 -0.5 615,846 - CA264_02655 0.23 +0.1 616,002 + CA264_02655 0.42 +0.9 616,010 + CA264_02655 0.43 +1.5 616,011 - CA264_02655 0.43 -0.3 616,024 - CA264_02655 0.44 -0.2 616,042 + CA264_02655 0.46 +0.3 616,042 + CA264_02655 0.46 -0.1 616,043 - CA264_02655 0.47 -0.2 616,095 + CA264_02655 0.53 +0.1 616,105 + CA264_02655 0.54 +0.7 616,105 + CA264_02655 0.54 -0.4 616,105 + CA264_02655 0.54 -0.9 616,105 + CA264_02655 0.54 -1.1 616,106 - CA264_02655 0.54 -1.4 616,115 - CA264_02655 0.55 +0.7 616,154 + CA264_02655 0.60 -0.1 616,238 - CA264_02655 0.70 +0.1 616,315 - CA264_02655 0.79 -0.1
Or see this region's nucleotide sequence