Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01885 and CA264_01890 are separated by 219 nucleotides CA264_01890 and CA264_01895 are separated by 170 nucleotides CA264_01895 and CA264_01900 are separated by 435 nucleotides
CA264_01885: CA264_01885 - peptidase M3, at 438,811 to 441,006
_01885
CA264_01890: CA264_01890 - hypothetical protein, at 441,226 to 441,681
_01890
CA264_01895: CA264_01895 - hypothetical protein, at 441,852 to 442,154
_01895
CA264_01900: CA264_01900 - hypothetical protein, at 442,590 to 443,381
_01900
Position (kb) 441
442
443 Strain fitness (log2 ratio) -2
-1
0
1
2 at 440.860 kb on + strand at 440.874 kb on + strand at 440.947 kb on + strand at 440.948 kb on - strand at 440.987 kb on + strand at 440.987 kb on + strand at 441.006 kb on + strand at 441.006 kb on + strand at 441.008 kb on + strand at 441.008 kb on + strand at 441.008 kb on + strand at 441.009 kb on - strand at 441.009 kb on - strand at 441.009 kb on - strand at 441.012 kb on + strand at 441.012 kb on + strand at 441.013 kb on - strand at 441.016 kb on + strand at 441.019 kb on + strand at 441.020 kb on - strand at 441.025 kb on + strand at 441.025 kb on + strand at 441.025 kb on + strand at 441.027 kb on + strand at 441.027 kb on + strand at 441.027 kb on + strand at 441.027 kb on + strand at 441.027 kb on + strand at 441.031 kb on - strand at 441.031 kb on - strand at 441.052 kb on - strand at 441.057 kb on + strand at 441.061 kb on + strand at 441.062 kb on - strand at 441.062 kb on - strand at 441.062 kb on - strand at 441.062 kb on - strand at 441.062 kb on - strand at 441.063 kb on + strand at 441.135 kb on + strand at 441.198 kb on + strand at 441.198 kb on + strand at 441.199 kb on - strand at 441.199 kb on - strand at 441.222 kb on + strand at 441.269 kb on + strand at 441.270 kb on - strand at 441.270 kb on - strand at 441.272 kb on - strand, within CA264_01890 at 441.272 kb on - strand, within CA264_01890 at 441.272 kb on - strand, within CA264_01890 at 441.412 kb on - strand, within CA264_01890 at 441.542 kb on + strand, within CA264_01890 at 441.607 kb on + strand, within CA264_01890 at 441.743 kb on - strand at 441.754 kb on - strand at 441.775 kb on + strand at 441.776 kb on - strand at 441.840 kb on - strand at 441.840 kb on - strand at 441.864 kb on - strand at 441.876 kb on + strand at 441.880 kb on - strand at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.930 kb on + strand, within CA264_01895 at 441.931 kb on - strand, within CA264_01895 at 441.993 kb on + strand, within CA264_01895 at 441.993 kb on + strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.994 kb on - strand, within CA264_01895 at 441.997 kb on + strand, within CA264_01895 at 441.997 kb on + strand, within CA264_01895 at 441.998 kb on - strand, within CA264_01895 at 441.998 kb on - strand, within CA264_01895 at 442.020 kb on + strand, within CA264_01895 at 442.022 kb on + strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.023 kb on - strand, within CA264_01895 at 442.056 kb on - strand, within CA264_01895 at 442.072 kb on + strand, within CA264_01895 at 442.072 kb on + strand, within CA264_01895 at 442.073 kb on - strand, within CA264_01895 at 442.073 kb on - strand, within CA264_01895 at 442.166 kb on + strand at 442.204 kb on + strand at 442.257 kb on - strand at 442.284 kb on - strand at 442.400 kb on - strand at 442.413 kb on - strand at 442.413 kb on - strand at 442.420 kb on + strand at 442.421 kb on - strand at 442.515 kb on + strand at 442.519 kb on - strand at 442.519 kb on - strand at 442.522 kb on + strand at 442.567 kb on - strand at 442.578 kb on - strand at 442.583 kb on + strand at 442.583 kb on + strand at 442.584 kb on - strand at 442.590 kb on - strand at 442.590 kb on - strand at 442.599 kb on - strand at 442.603 kb on + strand at 442.604 kb on - strand at 442.604 kb on - strand at 442.604 kb on - strand at 442.606 kb on + strand at 442.606 kb on + strand at 442.607 kb on - strand at 442.645 kb on + strand at 442.654 kb on + strand at 442.655 kb on - strand at 442.658 kb on + strand at 442.689 kb on - strand, within CA264_01900 at 442.742 kb on + strand, within CA264_01900 at 442.743 kb on - strand, within CA264_01900 at 442.743 kb on - strand, within CA264_01900 at 442.744 kb on + strand, within CA264_01900 at 442.745 kb on - strand, within CA264_01900 at 442.745 kb on - strand, within CA264_01900 at 442.748 kb on + strand, within CA264_01900 at 442.748 kb on + strand, within CA264_01900 at 442.749 kb on - strand, within CA264_01900 at 442.803 kb on + strand, within CA264_01900 at 442.821 kb on - strand, within CA264_01900 at 442.871 kb on + strand, within CA264_01900 at 442.872 kb on - strand, within CA264_01900 at 443.061 kb on - strand, within CA264_01900 at 443.062 kb on + strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.063 kb on - strand, within CA264_01900 at 443.141 kb on + strand, within CA264_01900
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 440,860 + -0.6 440,874 + +0.1 440,947 + +0.4 440,948 - -0.4 440,987 + -1.0 440,987 + +1.1 441,006 + -0.4 441,006 + +0.9 441,008 + +1.2 441,008 + -0.7 441,008 + +0.2 441,009 - -0.7 441,009 - -0.0 441,009 - -1.0 441,012 + +0.1 441,012 + -0.0 441,013 - +0.1 441,016 + +0.9 441,019 + +0.1 441,020 - +0.2 441,025 + -0.6 441,025 + +0.3 441,025 + +0.9 441,027 + -0.4 441,027 + +0.3 441,027 + +0.2 441,027 + -0.1 441,027 + +0.4 441,031 - -0.1 441,031 - +0.1 441,052 - -0.4 441,057 + +0.4 441,061 + -0.0 441,062 - -1.0 441,062 - -0.7 441,062 - +0.1 441,062 - +0.4 441,062 - -0.4 441,063 + -1.0 441,135 + -0.6 441,198 + -0.3 441,198 + +0.9 441,199 - +0.4 441,199 - -0.7 441,222 + +0.4 441,269 + +0.0 441,270 - -0.6 441,270 - -1.0 441,272 - CA264_01890 0.10 +0.2 441,272 - CA264_01890 0.10 +0.4 441,272 - CA264_01890 0.10 +1.4 441,412 - CA264_01890 0.41 +0.8 441,542 + CA264_01890 0.69 +0.2 441,607 + CA264_01890 0.84 +0.1 441,743 - -1.6 441,754 - -1.0 441,775 + -1.8 441,776 - -0.3 441,840 - -0.7 441,840 - -0.7 441,864 - +0.5 441,876 + +0.2 441,880 - -0.4 441,930 + CA264_01895 0.26 +1.0 441,930 + CA264_01895 0.26 -0.1 441,930 + CA264_01895 0.26 +0.1 441,930 + CA264_01895 0.26 -1.1 441,931 - CA264_01895 0.26 +0.0 441,993 + CA264_01895 0.47 -0.0 441,993 + CA264_01895 0.47 +1.7 441,994 - CA264_01895 0.47 -0.2 441,994 - CA264_01895 0.47 -0.7 441,994 - CA264_01895 0.47 -0.1 441,997 + CA264_01895 0.48 +0.9 441,997 + CA264_01895 0.48 +0.5 441,998 - CA264_01895 0.48 +0.0 441,998 - CA264_01895 0.48 -0.1 442,020 + CA264_01895 0.55 -0.7 442,022 + CA264_01895 0.56 +0.1 442,023 - CA264_01895 0.56 +0.1 442,023 - CA264_01895 0.56 +1.9 442,023 - CA264_01895 0.56 -0.4 442,056 - CA264_01895 0.67 -1.3 442,072 + CA264_01895 0.73 +1.3 442,072 + CA264_01895 0.73 +0.4 442,073 - CA264_01895 0.73 +0.4 442,073 - CA264_01895 0.73 -0.3 442,166 + +0.7 442,204 + +0.0 442,257 - -0.7 442,284 - -0.7 442,400 - -0.1 442,413 - +1.3 442,413 - -0.1 442,420 + -0.7 442,421 - +0.7 442,515 + -1.4 442,519 - +0.3 442,519 - +1.3 442,522 + -0.3 442,567 - +0.5 442,578 - +1.3 442,583 + +0.3 442,583 + -0.8 442,584 - -0.2 442,590 - -0.7 442,590 - +0.9 442,599 - +0.9 442,603 + -1.7 442,604 - -0.4 442,604 - -0.1 442,604 - -1.7 442,606 + +0.1 442,606 + +0.9 442,607 - -0.7 442,645 + +0.4 442,654 + -0.2 442,655 - -0.5 442,658 + -1.7 442,689 - CA264_01900 0.12 -0.7 442,742 + CA264_01900 0.19 -0.1 442,743 - CA264_01900 0.19 -0.1 442,743 - CA264_01900 0.19 +0.9 442,744 + CA264_01900 0.19 +0.0 442,745 - CA264_01900 0.20 -0.1 442,745 - CA264_01900 0.20 -0.5 442,748 + CA264_01900 0.20 +0.0 442,748 + CA264_01900 0.20 +1.2 442,749 - CA264_01900 0.20 +0.3 442,803 + CA264_01900 0.27 +0.5 442,821 - CA264_01900 0.29 -0.4 442,871 + CA264_01900 0.35 +0.4 442,872 - CA264_01900 0.36 -0.4 443,061 - CA264_01900 0.59 +1.2 443,062 + CA264_01900 0.60 -1.0 443,063 - CA264_01900 0.60 -0.7 443,063 - CA264_01900 0.60 -0.4 443,141 + CA264_01900 0.70 -1.1
Or see this region's nucleotide sequence