Experiment: m.b. Nalidixic 0.008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01400 and CA264_01405 are separated by 401 nucleotides CA264_01405 and CA264_01410 are separated by 351 nucleotides
CA264_01400: CA264_01400 - lipid-A-disaccharide synthase, at 333,373 to 334,494
_01400
CA264_01405: CA264_01405 - ATP-dependent Clp protease ATP-binding subunit ClpX, at 334,896 to 336,119
_01405
CA264_01410: CA264_01410 - ATP-dependent Clp protease proteolytic subunit, at 336,471 to 337,172
_01410
Position (kb) 334
335
336
337 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 334.490 kb on + strand at 334.490 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.492 kb on + strand at 334.578 kb on - strand at 334.604 kb on + strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.708 kb on - strand at 334.710 kb on + strand at 334.776 kb on - strand at 334.776 kb on - strand at 334.795 kb on - strand at 334.799 kb on + strand at 334.849 kb on - strand at 334.855 kb on + strand at 334.856 kb on - strand at 334.918 kb on - strand at 334.949 kb on - strand at 334.962 kb on - strand at 335.031 kb on - strand, within CA264_01405 at 335.142 kb on - strand, within CA264_01405 at 335.144 kb on - strand, within CA264_01405 at 335.328 kb on - strand, within CA264_01405 at 335.479 kb on - strand, within CA264_01405 at 335.586 kb on + strand, within CA264_01405 at 335.600 kb on - strand, within CA264_01405 at 335.631 kb on - strand, within CA264_01405 at 335.633 kb on - strand, within CA264_01405 at 335.646 kb on + strand, within CA264_01405 at 335.657 kb on + strand, within CA264_01405 at 335.658 kb on - strand, within CA264_01405 at 335.661 kb on + strand, within CA264_01405 at 335.662 kb on - strand, within CA264_01405 at 335.683 kb on - strand, within CA264_01405 at 335.703 kb on + strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.704 kb on - strand, within CA264_01405 at 335.765 kb on - strand, within CA264_01405 at 335.795 kb on + strand, within CA264_01405 at 335.856 kb on - strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.857 kb on + strand, within CA264_01405 at 335.858 kb on - strand, within CA264_01405 at 335.865 kb on - strand, within CA264_01405 at 335.866 kb on + strand, within CA264_01405 at 335.867 kb on - strand, within CA264_01405 at 336.073 kb on - strand at 336.330 kb on + strand at 336.351 kb on + strand at 336.451 kb on - strand at 336.457 kb on + strand at 336.458 kb on - strand at 336.460 kb on + strand at 336.462 kb on + strand at 336.462 kb on + strand at 336.463 kb on - strand at 336.465 kb on + strand at 336.465 kb on + strand at 336.472 kb on + strand at 336.764 kb on + strand, within CA264_01410 at 336.764 kb on + strand, within CA264_01410 at 336.807 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410 at 337.096 kb on + strand, within CA264_01410
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Nalidixic 0.008 mg/ml remove 334,490 + -0.8 334,490 + -1.0 334,492 + -0.1 334,492 + +0.8 334,492 + -0.1 334,578 - -0.1 334,604 + +1.1 334,708 - -0.8 334,708 - +3.1 334,708 - -1.0 334,710 + +1.2 334,776 - -0.6 334,776 - -0.5 334,795 - +0.5 334,799 + -0.5 334,849 - -0.4 334,855 + -1.7 334,856 - -0.2 334,918 - -0.2 334,949 - -1.4 334,962 - -1.7 335,031 - CA264_01405 0.11 -1.2 335,142 - CA264_01405 0.20 -2.6 335,144 - CA264_01405 0.20 -2.7 335,328 - CA264_01405 0.35 -1.3 335,479 - CA264_01405 0.48 -0.8 335,586 + CA264_01405 0.56 -3.0 335,600 - CA264_01405 0.58 -1.9 335,631 - CA264_01405 0.60 -2.0 335,633 - CA264_01405 0.60 -2.7 335,646 + CA264_01405 0.61 -0.9 335,657 + CA264_01405 0.62 -2.5 335,658 - CA264_01405 0.62 -1.6 335,661 + CA264_01405 0.62 -0.8 335,662 - CA264_01405 0.63 -1.4 335,683 - CA264_01405 0.64 -1.5 335,703 + CA264_01405 0.66 -0.0 335,704 - CA264_01405 0.66 -1.4 335,704 - CA264_01405 0.66 -2.6 335,765 - CA264_01405 0.71 -1.9 335,795 + CA264_01405 0.73 -4.0 335,856 - CA264_01405 0.78 -1.7 335,857 + CA264_01405 0.79 -1.2 335,857 + CA264_01405 0.79 -1.2 335,858 - CA264_01405 0.79 -2.1 335,865 - CA264_01405 0.79 -1.8 335,866 + CA264_01405 0.79 -2.5 335,867 - CA264_01405 0.79 -2.0 336,073 - -2.2 336,330 + +0.4 336,351 + -0.4 336,451 - +0.7 336,457 + -3.1 336,458 - -0.5 336,460 + -2.2 336,462 + -2.7 336,462 + -0.2 336,463 - -0.6 336,465 + -4.2 336,465 + -3.3 336,472 + -1.5 336,764 + CA264_01410 0.42 -1.2 336,764 + CA264_01410 0.42 -2.9 336,807 + CA264_01410 0.48 -2.0 337,096 + CA264_01410 0.89 -0.5 337,096 + CA264_01410 0.89 +0.8
Or see this region's nucleotide sequence