Strain Fitness in Pseudomonas sp. RS175 around PFR28_04617

Experiment: D-(+)-Galactosamine (C) 10 mM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-(+)-Galactosamine (C) 10 mM
5,272,428	+		PFR28_04616	0.59	-0.1
5,272,428	+		PFR28_04616	0.59	-0.6
5,272,428	+		PFR28_04616	0.59	+1.4
5,272,428	+		PFR28_04616	0.59	+0.0
5,272,428	+		PFR28_04616	0.59	+0.5
5,272,428	+		PFR28_04616	0.59	-1.4
5,272,428	+		PFR28_04616	0.59	+0.4
5,272,428	+		PFR28_04616	0.59	+0.3
5,272,428	+		PFR28_04616	0.59	-1.7
5,272,429	-		PFR28_04616	0.59	+0.1
5,272,429	-		PFR28_04616	0.59	+0.7
5,272,429	-		PFR28_04616	0.59	-0.5
5,272,429	-		PFR28_04616	0.59	+1.0
5,272,436	-		PFR28_04616	0.59	-0.3
5,272,436	-		PFR28_04616	0.59	-0.1
5,272,436	-		PFR28_04616	0.59	+0.1
5,272,591	+		PFR28_04616	0.66	+0.2
5,272,592	-		PFR28_04616	0.67	+0.4
5,272,592	-		PFR28_04616	0.67	-1.5
5,272,636	+		PFR28_04616	0.69	-2.3
5,272,636	+		PFR28_04616	0.69	+0.9
5,272,636	+		PFR28_04616	0.69	+0.1
5,272,637	-		PFR28_04616	0.69	-0.5
5,272,637	-		PFR28_04616	0.69	+0.2
5,272,707	+		PFR28_04616	0.72	+0.2
5,272,781	+		PFR28_04616	0.75	-1.0
5,272,781	+		PFR28_04616	0.75	-0.2
5,272,781	+		PFR28_04616	0.75	+0.1
5,272,781	+		PFR28_04616	0.75	-1.1
5,272,781	+		PFR28_04616	0.75	-3.0
5,272,781	+		PFR28_04616	0.75	+1.0
5,272,781	+		PFR28_04616	0.75	+1.5
5,272,781	+		PFR28_04616	0.75	+1.9
5,272,781	+		PFR28_04616	0.75	+2.0
5,272,781	+		PFR28_04616	0.75	-0.0
5,272,781	+		PFR28_04616	0.75	+1.2
5,272,781	+		PFR28_04616	0.75	-1.0
5,272,781	+		PFR28_04616	0.75	-0.4
5,272,781	+		PFR28_04616	0.75	-0.8
5,272,782	-		PFR28_04616	0.75	+0.6
5,272,782	-		PFR28_04616	0.75	-1.8
5,272,782	-		PFR28_04616	0.75	-1.2
5,272,782	-		PFR28_04616	0.75	+0.4
5,272,782	-		PFR28_04616	0.75	-1.2
5,272,782	-		PFR28_04616	0.75	+0.8
5,272,782	-		PFR28_04616	0.75	+1.0
5,272,782	-		PFR28_04616	0.75	-0.1
5,272,782	-		PFR28_04616	0.75	-0.7
5,272,782	-		PFR28_04616	0.75	-0.6
5,272,782	-		PFR28_04616	0.75	+0.4
5,272,782	-		PFR28_04616	0.75	-1.2
5,272,782	-		PFR28_04616	0.75	+1.0
5,272,782	-		PFR28_04616	0.75	-0.6
5,272,785	+		PFR28_04616	0.76	+1.0
5,272,785	+		PFR28_04616	0.76	+0.2
5,272,785	+		PFR28_04616	0.76	-0.9
5,272,786	-		PFR28_04616	0.76	+0.9
5,272,786	-		PFR28_04616	0.76	+0.6
5,272,865	+		PFR28_04616	0.79	+0.3
5,273,107	+				+0.3
5,273,107	+				+0.3
5,273,107	+				-1.8
5,273,107	+				+0.2
5,273,107	+				-0.1
5,273,107	+				+1.8
5,273,107	+				+0.1
5,273,107	+				+1.8
5,273,107	+				+0.7
5,273,107	+				-0.2
5,273,107	+				-0.2
5,273,107	+				+0.4
5,273,108	-				+0.2
5,273,108	-				-0.4
5,273,108	-				+0.2
5,273,108	-				-1.6
5,273,108	-				-1.7
5,273,108	-				+0.6
5,273,108	-				-2.1
5,273,108	-				-0.4
5,273,108	-				+1.3
5,273,108	-				+0.1
5,273,108	-				-0.3
5,273,108	-				-0.3
5,273,111	+				+0.7
5,273,111	+				+0.4
5,273,111	+				+1.6
5,273,111	+				+1.1
5,273,111	+				-0.2
5,273,111	+				+0.7
5,273,112	-				+0.4
5,273,112	-				+0.1
5,273,112	-				-0.3
5,273,112	-				+0.8
5,273,112	-				-0.1
5,273,112	-				-0.8
5,273,112	-				+0.6
5,273,122	+				-0.7
5,273,122	+				-1.9
5,273,122	+				+1.1
5,273,122	+				-0.4
5,273,122	+				+0.8
5,273,123	-				-0.3
5,273,123	-				-0.1
5,273,305	+				+0.3
5,273,353	+				+1.0
5,273,353	+				-0.1
5,273,354	-				-0.9
5,273,354	-				+0.4
5,273,354	-				+0.7
5,273,354	-				+0.3
5,273,354	-				+0.7
5,273,397	-				+0.3
5,273,568	+		PFR28_04617	0.24	+0.4
5,273,569	-		PFR28_04617	0.24	-0.2
5,273,616	+		PFR28_04617	0.31	+0.4
5,273,617	-		PFR28_04617	0.31	-1.0
5,273,628	+		PFR28_04617	0.33	-1.2
5,273,628	+		PFR28_04617	0.33	-1.2
5,273,827	+		PFR28_04617	0.61	+0.5
5,273,828	-		PFR28_04617	0.61	-0.5
5,273,828	-		PFR28_04617	0.61	-1.6
5,273,828	-		PFR28_04617	0.61	-0.1
5,273,868	-		PFR28_04617	0.66	-2.2
5,273,868	-		PFR28_04617	0.66	-0.5
5,273,892	-		PFR28_04617	0.70	+1.0
5,274,012	+		PFR28_04617	0.86	+0.8
5,274,087	-				+2.0
5,274,087	-				-0.3
5,274,122	+				-1.9
5,274,122	+				-1.0
5,274,123	-				+0.9
5,274,148	-				-0.7
5,274,148	-				-0.7
5,274,594	+		PFR28_04618	0.57	+2.4
5,274,594	+		PFR28_04618	0.57	+0.8
5,274,595	-		PFR28_04618	0.57	+1.6
5,274,659	-		PFR28_04618	0.65	+1.5
5,274,837	+		PFR28_04618	0.88	+0.8
5,274,838	-		PFR28_04618	0.88	+1.4
5,274,915	+				+0.0
5,274,915	+				+0.2
5,274,915	+				+0.8
5,274,915	+				+0.8
5,274,915	+				+0.8
5,274,915	+				+1.5
5,274,915	+				+0.6
5,274,915	+				+1.9
5,274,915	+				+1.6
5,274,915	+				+1.2
5,274,915	+				+1.2
5,274,915	+				+0.2
5,274,915	+				+0.6
5,274,915	+				+1.0
5,274,915	+				+1.0
5,274,916	-				-0.4
5,274,916	-				-0.6
5,274,916	-				-0.0
5,274,916	-				+1.3
5,274,916	-				+1.2
5,274,916	-				+3.3
5,274,916	-				+1.4
5,274,916	-				+1.3
5,274,916	-				+0.7
5,274,916	-				+1.5
5,274,916	-				+0.3
5,274,916	-				+0.4
5,274,916	-				+0.6
5,274,916	-				+1.3
5,274,916	-				+0.8
5,274,916	-				+1.1
5,274,916	-				-0.5
5,274,916	-				-0.0
5,274,962	+				+1.2
5,274,962	+				-0.9
5,274,962	+				-0.8
5,274,962	+				-0.5
5,274,962	+				+0.5
5,274,963	-				+0.1
5,274,963	-				-0.3
5,274,963	-				-1.2
5,275,027	+		PFR28_04619	0.13	-1.4
5,275,027	+		PFR28_04619	0.13	+0.9
5,275,027	+		PFR28_04619	0.13	+1.2
5,275,027	+		PFR28_04619	0.13	-0.6
5,275,028	-		PFR28_04619	0.13	-0.9
5,275,028	-		PFR28_04619	0.13	-1.8
5,275,028	-		PFR28_04619	0.13	+0.8
5,275,028	-		PFR28_04619	0.13	-0.8
5,275,028	-		PFR28_04619	0.13	+2.0
5,275,028	-		PFR28_04619	0.13	-1.3
5,275,028	-		PFR28_04619	0.13	-0.8
5,275,028	-		PFR28_04619	0.13	-1.5