Experiment: D-Galactose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Echvi_2630 and Echvi_2631 are separated by 29 nucleotides Echvi_2631 and Echvi_2632 are separated by 50 nucleotides Echvi_2632 and Echvi_2633 are separated by 148 nucleotides
Echvi_2630: Echvi_2630 - Alkaline phosphatase, at 3,117,617 to 3,119,446
_2630
Echvi_2631: Echvi_2631 - hypothetical protein, at 3,119,476 to 3,119,898
_2631
Echvi_2632: Echvi_2632 - Zn-dependent hydrolases, including glyoxylases, at 3,119,949 to 3,120,722
_2632
Echvi_2633: Echvi_2633 - gamma-glutamylphosphate reductase (EC 1.2.1.41) (from data) , at 3,120,871 to 3,122,070
_2633
Position (kb)
3119
3120 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3118.511 kb on + strand, within Echvi_2630 at 3118.511 kb on + strand, within Echvi_2630 at 3118.511 kb on + strand, within Echvi_2630 at 3118.511 kb on + strand, within Echvi_2630 at 3118.511 kb on + strand, within Echvi_2630 at 3118.511 kb on + strand, within Echvi_2630 at 3118.545 kb on + strand, within Echvi_2630 at 3118.545 kb on + strand, within Echvi_2630 at 3118.546 kb on - strand, within Echvi_2630 at 3118.589 kb on - strand, within Echvi_2630 at 3118.710 kb on - strand, within Echvi_2630 at 3118.710 kb on - strand, within Echvi_2630 at 3118.757 kb on - strand, within Echvi_2630 at 3119.094 kb on + strand, within Echvi_2630 at 3119.094 kb on + strand, within Echvi_2630 at 3119.095 kb on - strand, within Echvi_2630 at 3119.257 kb on + strand, within Echvi_2630 at 3119.257 kb on + strand, within Echvi_2630 at 3119.258 kb on - strand, within Echvi_2630 at 3119.258 kb on - strand, within Echvi_2630 at 3119.258 kb on - strand, within Echvi_2630 at 3119.382 kb on - strand at 3119.405 kb on - strand at 3119.422 kb on - strand at 3119.440 kb on + strand at 3119.441 kb on - strand at 3119.441 kb on - strand at 3119.477 kb on + strand at 3119.497 kb on + strand at 3119.508 kb on + strand at 3119.520 kb on - strand, within Echvi_2631 at 3119.534 kb on + strand, within Echvi_2631 at 3119.534 kb on + strand, within Echvi_2631 at 3119.534 kb on + strand, within Echvi_2631 at 3119.535 kb on - strand, within Echvi_2631 at 3119.554 kb on + strand, within Echvi_2631 at 3119.663 kb on - strand, within Echvi_2631 at 3119.872 kb on + strand at 3119.872 kb on + strand at 3119.873 kb on - strand at 3119.877 kb on + strand at 3119.878 kb on - strand at 3119.924 kb on + strand at 3119.925 kb on - strand at 3119.943 kb on + strand at 3119.944 kb on - strand at 3119.971 kb on + strand at 3119.971 kb on + strand at 3119.972 kb on - strand at 3119.972 kb on - strand at 3120.096 kb on - strand, within Echvi_2632 at 3120.113 kb on + strand, within Echvi_2632 at 3120.169 kb on - strand, within Echvi_2632 at 3120.169 kb on - strand, within Echvi_2632 at 3120.182 kb on + strand, within Echvi_2632 at 3120.294 kb on + strand, within Echvi_2632 at 3120.295 kb on - strand, within Echvi_2632 at 3120.313 kb on + strand, within Echvi_2632 at 3120.314 kb on - strand, within Echvi_2632 at 3120.314 kb on - strand, within Echvi_2632 at 3120.314 kb on - strand, within Echvi_2632 at 3120.381 kb on + strand, within Echvi_2632 at 3120.381 kb on + strand, within Echvi_2632 at 3120.384 kb on + strand, within Echvi_2632 at 3120.399 kb on + strand, within Echvi_2632 at 3120.465 kb on + strand, within Echvi_2632 at 3120.553 kb on + strand, within Echvi_2632 at 3120.554 kb on - strand, within Echvi_2632 at 3120.554 kb on - strand, within Echvi_2632 at 3120.554 kb on - strand, within Echvi_2632 at 3120.554 kb on - strand, within Echvi_2632 at 3120.554 kb on - strand, within Echvi_2632 at 3120.557 kb on + strand, within Echvi_2632 at 3120.558 kb on - strand, within Echvi_2632 at 3120.558 kb on - strand, within Echvi_2632 at 3120.598 kb on + strand, within Echvi_2632 at 3120.599 kb on - strand, within Echvi_2632 at 3120.599 kb on - strand, within Echvi_2632 at 3120.704 kb on + strand at 3120.715 kb on + strand at 3120.724 kb on - strand at 3120.735 kb on + strand at 3120.743 kb on - strand at 3120.755 kb on + strand at 3120.756 kb on - strand at 3120.756 kb on - strand at 3120.769 kb on - strand at 3120.812 kb on + strand at 3120.850 kb on + strand at 3120.850 kb on + strand at 3120.850 kb on + strand at 3120.855 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Galactose (C) remove 3,118,511 + Echvi_2630 0.49 +1.4 3,118,511 + Echvi_2630 0.49 +0.2 3,118,511 + Echvi_2630 0.49 -0.4 3,118,511 + Echvi_2630 0.49 -0.4 3,118,511 + Echvi_2630 0.49 +0.4 3,118,511 + Echvi_2630 0.49 -1.1 3,118,545 + Echvi_2630 0.51 +2.3 3,118,545 + Echvi_2630 0.51 -0.8 3,118,546 - Echvi_2630 0.51 -1.6 3,118,589 - Echvi_2630 0.53 +0.8 3,118,710 - Echvi_2630 0.60 +0.8 3,118,710 - Echvi_2630 0.60 -0.0 3,118,757 - Echvi_2630 0.62 +0.4 3,119,094 + Echvi_2630 0.81 +0.3 3,119,094 + Echvi_2630 0.81 -0.5 3,119,095 - Echvi_2630 0.81 +0.1 3,119,257 + Echvi_2630 0.90 +0.8 3,119,257 + Echvi_2630 0.90 +1.0 3,119,258 - Echvi_2630 0.90 -0.9 3,119,258 - Echvi_2630 0.90 +0.2 3,119,258 - Echvi_2630 0.90 +0.3 3,119,382 - +0.7 3,119,405 - -0.2 3,119,422 - +1.0 3,119,440 + +0.1 3,119,441 - -0.6 3,119,441 - +1.7 3,119,477 + -2.3 3,119,497 + -2.3 3,119,508 + -2.8 3,119,520 - Echvi_2631 0.10 +1.7 3,119,534 + Echvi_2631 0.14 -1.7 3,119,534 + Echvi_2631 0.14 -0.6 3,119,534 + Echvi_2631 0.14 -1.1 3,119,535 - Echvi_2631 0.14 -0.8 3,119,554 + Echvi_2631 0.18 -1.4 3,119,663 - Echvi_2631 0.44 -1.0 3,119,872 + +0.3 3,119,872 + -1.1 3,119,873 - +0.0 3,119,877 + -1.0 3,119,878 - -0.8 3,119,924 + +0.6 3,119,925 - -0.2 3,119,943 + +0.8 3,119,944 - +0.7 3,119,971 + +1.1 3,119,971 + -0.7 3,119,972 - -0.9 3,119,972 - +0.4 3,120,096 - Echvi_2632 0.19 -0.4 3,120,113 + Echvi_2632 0.21 -1.5 3,120,169 - Echvi_2632 0.28 +0.6 3,120,169 - Echvi_2632 0.28 +2.6 3,120,182 + Echvi_2632 0.30 -1.3 3,120,294 + Echvi_2632 0.45 +0.7 3,120,295 - Echvi_2632 0.45 +1.4 3,120,313 + Echvi_2632 0.47 -1.0 3,120,314 - Echvi_2632 0.47 +0.6 3,120,314 - Echvi_2632 0.47 +0.4 3,120,314 - Echvi_2632 0.47 +1.3 3,120,381 + Echvi_2632 0.56 -0.6 3,120,381 + Echvi_2632 0.56 -0.9 3,120,384 + Echvi_2632 0.56 +0.1 3,120,399 + Echvi_2632 0.58 +0.3 3,120,465 + Echvi_2632 0.67 +0.5 3,120,553 + Echvi_2632 0.78 -2.6 3,120,554 - Echvi_2632 0.78 -0.4 3,120,554 - Echvi_2632 0.78 +0.4 3,120,554 - Echvi_2632 0.78 -0.6 3,120,554 - Echvi_2632 0.78 -0.6 3,120,554 - Echvi_2632 0.78 +0.6 3,120,557 + Echvi_2632 0.79 +0.9 3,120,558 - Echvi_2632 0.79 +1.3 3,120,558 - Echvi_2632 0.79 -0.1 3,120,598 + Echvi_2632 0.84 +0.7 3,120,599 - Echvi_2632 0.84 +1.0 3,120,599 - Echvi_2632 0.84 -0.1 3,120,704 + +0.6 3,120,715 + +0.5 3,120,724 - -0.3 3,120,735 + -2.0 3,120,743 - -1.5 3,120,755 + -1.3 3,120,756 - -0.1 3,120,756 - -0.0 3,120,769 - +0.3 3,120,812 + +1.2 3,120,850 + +0.0 3,120,850 + +0.8 3,120,850 + +1.0 3,120,855 + -0.4
Or see this region's nucleotide sequence