Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_0700

Experiment: D-Galactose (C)

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntEchvi_0699 and Echvi_0700 are separated by 492 nucleotidesEchvi_0700 and Echvi_0701 are separated by 13 nucleotides Echvi_0699: Echvi_0699 - Transposase and inactivated derivatives, at 790,478 to 791,467 _0699 Echvi_0700: Echvi_0700 - Predicted aminopeptidases, at 791,960 to 792,922 _0700 Echvi_0701: Echvi_0701 - cysteinyl-tRNA synthetase, at 792,936 to 794,429 _0701 Position (kb) 791 792 793Strain fitness (log2 ratio) -2 -1 0 1 2 3at 791.600 kb on + strandat 791.646 kb on + strandat 791.647 kb on - strandat 791.647 kb on - strandat 791.691 kb on + strandat 791.759 kb on - strandat 791.759 kb on - strandat 791.814 kb on - strandat 791.835 kb on - strandat 791.874 kb on + strandat 791.953 kb on + strandat 792.932 kb on + strandat 792.946 kb on + strandat 792.947 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Galactose (C)
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791,600 + -0.4
791,646 + +0.9
791,647 - +1.2
791,647 - +1.1
791,691 + -1.0
791,759 - -0.6
791,759 - +1.0
791,814 - +0.0
791,835 - -1.9
791,874 + +0.3
791,953 + +3.6
792,932 + +0.5
792,946 + -0.2
792,947 - +1.7

Or see this region's nucleotide sequence