Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19920 and CA264_19925 are separated by 305 nucleotides CA264_19925 and CA264_19930 are separated by 2 nucleotides
CA264_19920: CA264_19920 - alanine glycine permease, at 4,593,234 to 4,594,793
_19920
CA264_19925: CA264_19925 - peptidyl-prolyl cis-trans isomerase, at 4,595,099 to 4,595,749
_19925
CA264_19930: CA264_19930 - NAD(P)-dependent oxidoreductase, at 4,595,752 to 4,596,663
_19930
Position (kb)
4595
4596 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 4594.124 kb on + strand, within CA264_19920 at 4594.221 kb on + strand, within CA264_19920 at 4594.222 kb on - strand, within CA264_19920 at 4594.261 kb on + strand, within CA264_19920 at 4594.262 kb on - strand, within CA264_19920 at 4594.431 kb on - strand, within CA264_19920 at 4594.510 kb on + strand, within CA264_19920 at 4594.511 kb on - strand, within CA264_19920 at 4594.570 kb on + strand, within CA264_19920 at 4594.571 kb on - strand, within CA264_19920 at 4594.571 kb on - strand, within CA264_19920 at 4594.571 kb on - strand, within CA264_19920 at 4594.637 kb on + strand, within CA264_19920 at 4594.638 kb on - strand at 4594.658 kb on + strand at 4594.670 kb on + strand at 4594.777 kb on - strand at 4594.795 kb on + strand at 4594.796 kb on - strand at 4594.796 kb on - strand at 4594.804 kb on + strand at 4594.805 kb on - strand at 4594.805 kb on - strand at 4594.961 kb on + strand at 4595.090 kb on + strand at 4595.090 kb on + strand at 4595.090 kb on + strand at 4595.090 kb on + strand at 4595.091 kb on - strand at 4595.091 kb on - strand at 4595.091 kb on - strand at 4595.094 kb on + strand at 4595.094 kb on + strand at 4595.094 kb on + strand at 4595.095 kb on - strand at 4595.095 kb on - strand at 4595.095 kb on - strand at 4595.098 kb on + strand at 4595.099 kb on - strand at 4595.116 kb on + strand at 4595.196 kb on + strand, within CA264_19925 at 4595.196 kb on + strand, within CA264_19925 at 4595.196 kb on + strand, within CA264_19925 at 4595.197 kb on - strand, within CA264_19925 at 4595.516 kb on + strand, within CA264_19925 at 4595.517 kb on - strand, within CA264_19925 at 4595.561 kb on + strand, within CA264_19925 at 4595.561 kb on + strand, within CA264_19925 at 4595.561 kb on + strand, within CA264_19925 at 4595.562 kb on - strand, within CA264_19925 at 4595.562 kb on - strand, within CA264_19925 at 4595.583 kb on + strand, within CA264_19925 at 4595.584 kb on - strand, within CA264_19925 at 4595.584 kb on - strand, within CA264_19925 at 4595.605 kb on + strand, within CA264_19925 at 4595.605 kb on + strand, within CA264_19925 at 4595.606 kb on - strand, within CA264_19925 at 4595.606 kb on - strand, within CA264_19925 at 4595.708 kb on + strand at 4595.708 kb on + strand at 4595.715 kb on - strand at 4595.716 kb on + strand at 4595.716 kb on + strand at 4595.717 kb on - strand at 4595.717 kb on - strand at 4595.720 kb on + strand at 4595.747 kb on + strand at 4595.748 kb on - strand at 4596.661 kb on + strand at 4596.661 kb on + strand at 4596.662 kb on - strand at 4596.682 kb on + strand at 4596.736 kb on + strand at 4596.737 kb on - strand at 4596.737 kb on - strand at 4596.740 kb on + strand at 4596.740 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 4,594,124 + CA264_19920 0.57 -2.3 4,594,221 + CA264_19920 0.63 -2.3 4,594,222 - CA264_19920 0.63 -1.3 4,594,261 + CA264_19920 0.66 +0.5 4,594,262 - CA264_19920 0.66 -1.6 4,594,431 - CA264_19920 0.77 -1.1 4,594,510 + CA264_19920 0.82 -2.7 4,594,511 - CA264_19920 0.82 -1.1 4,594,570 + CA264_19920 0.86 -1.8 4,594,571 - CA264_19920 0.86 -1.7 4,594,571 - CA264_19920 0.86 -1.4 4,594,571 - CA264_19920 0.86 -1.1 4,594,637 + CA264_19920 0.90 -2.0 4,594,638 - +0.4 4,594,658 + -0.7 4,594,670 + -1.3 4,594,777 - -1.5 4,594,795 + -2.3 4,594,796 - +0.5 4,594,796 - -0.9 4,594,804 + -2.0 4,594,805 - -1.3 4,594,805 - +0.8 4,594,961 + -3.9 4,595,090 + -1.6 4,595,090 + -1.1 4,595,090 + -2.4 4,595,090 + -1.6 4,595,091 - -2.7 4,595,091 - -1.4 4,595,091 - -2.7 4,595,094 + -1.5 4,595,094 + -2.7 4,595,094 + -1.4 4,595,095 - -1.1 4,595,095 - -0.1 4,595,095 - -3.2 4,595,098 + -0.7 4,595,099 - -4.2 4,595,116 + -2.7 4,595,196 + CA264_19925 0.15 -1.4 4,595,196 + CA264_19925 0.15 -3.9 4,595,196 + CA264_19925 0.15 -1.6 4,595,197 - CA264_19925 0.15 -1.1 4,595,516 + CA264_19925 0.64 -1.9 4,595,517 - CA264_19925 0.64 -2.0 4,595,561 + CA264_19925 0.71 -3.2 4,595,561 + CA264_19925 0.71 -2.1 4,595,561 + CA264_19925 0.71 -1.6 4,595,562 - CA264_19925 0.71 -0.7 4,595,562 - CA264_19925 0.71 -1.4 4,595,583 + CA264_19925 0.74 -0.7 4,595,584 - CA264_19925 0.75 -1.6 4,595,584 - CA264_19925 0.75 -1.6 4,595,605 + CA264_19925 0.78 -4.1 4,595,605 + CA264_19925 0.78 -3.2 4,595,606 - CA264_19925 0.78 -1.5 4,595,606 - CA264_19925 0.78 -0.7 4,595,708 + -2.1 4,595,708 + -1.8 4,595,715 - -2.3 4,595,716 + -0.4 4,595,716 + -0.8 4,595,717 - -0.6 4,595,717 - -2.4 4,595,720 + -3.4 4,595,747 + -4.4 4,595,748 - -1.1 4,596,661 + -1.4 4,596,661 + -1.5 4,596,662 - -2.7 4,596,682 + -0.7 4,596,736 + -1.1 4,596,737 - -2.5 4,596,737 - -1.8 4,596,740 + -3.4 4,596,740 + -2.7
Or see this region's nucleotide sequence