Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_19020 and CA264_19025 are separated by 260 nucleotides CA264_19025 and CA264_19030 are separated by 121 nucleotides CA264_19030 and CA264_19035 are separated by 24 nucleotides
CA264_19020: CA264_19020 - PA-phosphatase, at 4,422,349 to 4,423,152
_19020
CA264_19025: CA264_19025 - methionine adenosyltransferase, at 4,423,413 to 4,424,717
_19025
CA264_19030: CA264_19030 - ribosomal subunit interface protein, at 4,424,839 to 4,425,138
_19030
CA264_19035: CA264_19035 - integrase, at 4,425,163 to 4,426,041
_19035
Position (kb)
4423
4424
4425 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4422.482 kb on - strand, within CA264_19020 at 4422.532 kb on + strand, within CA264_19020 at 4422.570 kb on - strand, within CA264_19020 at 4422.660 kb on - strand, within CA264_19020 at 4422.716 kb on + strand, within CA264_19020 at 4422.794 kb on + strand, within CA264_19020 at 4422.795 kb on - strand, within CA264_19020 at 4422.795 kb on - strand, within CA264_19020 at 4422.872 kb on + strand, within CA264_19020 at 4422.873 kb on - strand, within CA264_19020 at 4422.914 kb on + strand, within CA264_19020 at 4422.914 kb on + strand, within CA264_19020 at 4422.914 kb on + strand, within CA264_19020 at 4422.915 kb on - strand, within CA264_19020 at 4422.915 kb on - strand, within CA264_19020 at 4422.944 kb on - strand, within CA264_19020 at 4423.139 kb on - strand at 4423.139 kb on - strand at 4423.141 kb on + strand at 4423.153 kb on - strand at 4423.172 kb on - strand at 4423.172 kb on - strand at 4423.174 kb on + strand at 4423.174 kb on + strand at 4423.218 kb on + strand at 4423.254 kb on - strand at 4423.272 kb on + strand at 4423.320 kb on - strand at 4423.320 kb on - strand at 4423.349 kb on - strand at 4423.386 kb on + strand at 4423.387 kb on - strand at 4423.394 kb on - strand at 4423.397 kb on + strand at 4424.734 kb on - strand at 4424.735 kb on + strand at 4424.754 kb on + strand at 4424.760 kb on + strand at 4424.779 kb on + strand at 4424.784 kb on + strand at 4424.817 kb on + strand at 4424.950 kb on - strand, within CA264_19030 at 4424.971 kb on - strand, within CA264_19030 at 4424.971 kb on - strand, within CA264_19030 at 4425.009 kb on + strand, within CA264_19030 at 4425.037 kb on + strand, within CA264_19030 at 4425.047 kb on + strand, within CA264_19030 at 4425.047 kb on + strand, within CA264_19030 at 4425.048 kb on - strand, within CA264_19030 at 4425.048 kb on - strand, within CA264_19030 at 4425.130 kb on + strand at 4425.131 kb on - strand at 4425.131 kb on - strand at 4425.165 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 4,422,482 - CA264_19020 0.17 +0.9 4,422,532 + CA264_19020 0.23 -0.7 4,422,570 - CA264_19020 0.27 +0.2 4,422,660 - CA264_19020 0.39 +0.0 4,422,716 + CA264_19020 0.46 -0.9 4,422,794 + CA264_19020 0.55 -0.8 4,422,795 - CA264_19020 0.55 -0.7 4,422,795 - CA264_19020 0.55 +0.9 4,422,872 + CA264_19020 0.65 -0.7 4,422,873 - CA264_19020 0.65 +1.6 4,422,914 + CA264_19020 0.70 +0.1 4,422,914 + CA264_19020 0.70 +2.9 4,422,914 + CA264_19020 0.70 +0.7 4,422,915 - CA264_19020 0.70 +1.5 4,422,915 - CA264_19020 0.70 +0.4 4,422,944 - CA264_19020 0.74 +0.0 4,423,139 - -2.1 4,423,139 - -0.1 4,423,141 + -0.2 4,423,153 - -0.5 4,423,172 - -0.7 4,423,172 - +0.5 4,423,174 + -0.7 4,423,174 + +0.1 4,423,218 + -0.4 4,423,254 - -1.5 4,423,272 + -0.1 4,423,320 - +0.2 4,423,320 - +4.1 4,423,349 - -1.1 4,423,386 + -0.1 4,423,387 - +0.1 4,423,394 - +0.8 4,423,397 + -0.1 4,424,734 - +0.7 4,424,735 + +0.5 4,424,754 + +0.5 4,424,760 + -1.1 4,424,779 + +1.1 4,424,784 + +1.7 4,424,817 + +1.4 4,424,950 - CA264_19030 0.37 +0.3 4,424,971 - CA264_19030 0.44 +0.9 4,424,971 - CA264_19030 0.44 +0.4 4,425,009 + CA264_19030 0.57 +0.6 4,425,037 + CA264_19030 0.66 +2.0 4,425,047 + CA264_19030 0.69 +1.4 4,425,047 + CA264_19030 0.69 +1.5 4,425,048 - CA264_19030 0.70 +2.9 4,425,048 - CA264_19030 0.70 +0.3 4,425,130 + +1.7 4,425,131 - +0.5 4,425,131 - +0.5 4,425,165 - +0.5
Or see this region's nucleotide sequence