Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_17615 and CA264_17620 are separated by 95 nucleotides CA264_17620 and CA264_17625 are separated by 9 nucleotides CA264_17625 and CA264_17630 overlap by 17 nucleotides CA264_17630 and CA264_17635 are separated by 9 nucleotides
CA264_17615: CA264_17615 - pantoate--beta-alanine ligase, at 4,103,298 to 4,104,152
_17615
CA264_17620: CA264_17620 - aspartate 1-decarboxylase, at 4,104,248 to 4,104,595
_17620
CA264_17625: CA264_17625 - TIGR00374 family protein, at 4,104,605 to 4,105,651
_17625
CA264_17630: CA264_17630 - D-glycero-beta-D-manno-heptose 1-phosphate adenylyltransferase, at 4,105,635 to 4,106,132
_17630
CA264_17635: CA264_17635 - hypothetical protein, at 4,106,142 to 4,106,822
_17635
Position (kb)
4104
4105
4106 Strain fitness (log2 ratio)
-1
0
1
2 at 4104.150 kb on + strand at 4104.150 kb on + strand at 4104.178 kb on - strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.199 kb on + strand at 4104.200 kb on - strand at 4104.200 kb on - strand at 4104.214 kb on + strand at 4104.214 kb on + strand at 4104.218 kb on + strand at 4104.232 kb on - strand at 4104.243 kb on - strand at 4106.119 kb on + strand at 4106.135 kb on + strand at 4106.136 kb on - strand at 4106.154 kb on + strand at 4106.155 kb on - strand at 4106.155 kb on - strand at 4106.159 kb on + strand at 4106.186 kb on + strand at 4106.226 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.308 kb on + strand, within CA264_17635 at 4106.309 kb on - strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.314 kb on + strand, within CA264_17635 at 4106.315 kb on - strand, within CA264_17635 at 4106.346 kb on + strand, within CA264_17635 at 4106.383 kb on - strand, within CA264_17635 at 4106.388 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.463 kb on + strand, within CA264_17635 at 4106.557 kb on + strand, within CA264_17635 at 4106.606 kb on + strand, within CA264_17635
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 4,104,150 + +0.4 4,104,150 + +0.2 4,104,178 - +2.2 4,104,199 + +1.4 4,104,199 + -1.4 4,104,199 + +0.7 4,104,199 + +2.3 4,104,199 + +0.6 4,104,199 + +1.1 4,104,200 - +1.3 4,104,200 - +0.2 4,104,214 + -0.0 4,104,214 + +0.8 4,104,218 + +1.6 4,104,232 - +2.4 4,104,243 - +1.3 4,106,119 + -0.4 4,106,135 + +0.3 4,106,136 - -0.2 4,106,154 + -0.3 4,106,155 - -0.8 4,106,155 - -0.6 4,106,159 + +2.0 4,106,186 + -0.8 4,106,226 + CA264_17635 0.12 -0.4 4,106,308 + CA264_17635 0.24 -0.0 4,106,308 + CA264_17635 0.24 +0.5 4,106,308 + CA264_17635 0.24 +0.5 4,106,309 - CA264_17635 0.25 -0.3 4,106,314 + CA264_17635 0.25 -0.7 4,106,314 + CA264_17635 0.25 -0.4 4,106,315 - CA264_17635 0.25 -1.5 4,106,346 + CA264_17635 0.30 -0.2 4,106,383 - CA264_17635 0.35 +0.6 4,106,388 + CA264_17635 0.36 -1.6 4,106,463 + CA264_17635 0.47 -0.9 4,106,463 + CA264_17635 0.47 -0.8 4,106,557 + CA264_17635 0.61 -0.4 4,106,606 + CA264_17635 0.68 +0.3
Or see this region's nucleotide sequence