Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_14855 and CA264_14860 are separated by 141 nucleotides CA264_14860 and CA264_14865 are separated by 59 nucleotides
CA264_14855: CA264_14855 - hypothetical protein, at 3,489,163 to 3,489,819
_14855
CA264_14860: CA264_14860 - hypothetical protein, at 3,489,961 to 3,490,620
_14860
CA264_14865: CA264_14865 - peptidase dimerization domain protein, at 3,490,680 to 3,492,038
_14865
Position (kb)
3489
3490
3491 Strain fitness (log2 ratio)
-1
0
1
2
3 at 3489.082 kb on + strand at 3489.086 kb on - strand at 3489.096 kb on - strand at 3489.112 kb on + strand at 3489.113 kb on - strand at 3489.143 kb on + strand at 3489.143 kb on + strand at 3489.174 kb on - strand at 3489.179 kb on + strand at 3489.331 kb on + strand, within CA264_14855 at 3489.399 kb on + strand, within CA264_14855 at 3489.400 kb on - strand, within CA264_14855 at 3489.420 kb on - strand, within CA264_14855 at 3489.466 kb on + strand, within CA264_14855 at 3489.472 kb on + strand, within CA264_14855 at 3489.482 kb on + strand, within CA264_14855 at 3489.517 kb on + strand, within CA264_14855 at 3489.544 kb on + strand, within CA264_14855 at 3489.577 kb on + strand, within CA264_14855 at 3489.578 kb on - strand, within CA264_14855 at 3489.672 kb on + strand, within CA264_14855 at 3489.673 kb on - strand, within CA264_14855 at 3489.711 kb on + strand, within CA264_14855 at 3489.712 kb on - strand, within CA264_14855 at 3489.749 kb on - strand, within CA264_14855 at 3489.841 kb on - strand at 3489.909 kb on + strand at 3489.929 kb on - strand at 3489.947 kb on + strand at 3489.991 kb on - strand at 3489.993 kb on - strand at 3490.067 kb on + strand, within CA264_14860 at 3490.138 kb on + strand, within CA264_14860 at 3490.199 kb on + strand, within CA264_14860 at 3490.201 kb on + strand, within CA264_14860 at 3490.201 kb on + strand, within CA264_14860 at 3490.202 kb on - strand, within CA264_14860 at 3490.397 kb on + strand, within CA264_14860 at 3490.397 kb on + strand, within CA264_14860 at 3490.519 kb on - strand, within CA264_14860 at 3490.577 kb on - strand at 3490.681 kb on + strand at 3490.739 kb on - strand at 3490.743 kb on - strand at 3490.743 kb on - strand at 3490.832 kb on + strand, within CA264_14865 at 3490.833 kb on - strand, within CA264_14865 at 3490.833 kb on - strand, within CA264_14865 at 3491.025 kb on - strand, within CA264_14865 at 3491.093 kb on + strand, within CA264_14865 at 3491.103 kb on - strand, within CA264_14865 at 3491.129 kb on - strand, within CA264_14865 at 3491.174 kb on + strand, within CA264_14865 at 3491.191 kb on + strand, within CA264_14865 at 3491.192 kb on - strand, within CA264_14865 at 3491.234 kb on + strand, within CA264_14865 at 3491.235 kb on - strand, within CA264_14865 at 3491.237 kb on - strand, within CA264_14865 at 3491.298 kb on + strand, within CA264_14865 at 3491.299 kb on - strand, within CA264_14865 at 3491.299 kb on - strand, within CA264_14865 at 3491.299 kb on - strand, within CA264_14865 at 3491.304 kb on - strand, within CA264_14865 at 3491.308 kb on + strand, within CA264_14865 at 3491.308 kb on + strand, within CA264_14865 at 3491.442 kb on + strand, within CA264_14865 at 3491.616 kb on - strand, within CA264_14865
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 3,489,082 + +1.6 3,489,086 - -0.4 3,489,096 - +2.3 3,489,112 + +0.3 3,489,113 - +0.7 3,489,143 + +0.3 3,489,143 + +0.4 3,489,174 - +0.8 3,489,179 + -0.0 3,489,331 + CA264_14855 0.26 +0.1 3,489,399 + CA264_14855 0.36 -0.5 3,489,400 - CA264_14855 0.36 +0.5 3,489,420 - CA264_14855 0.39 -0.5 3,489,466 + CA264_14855 0.46 +0.3 3,489,472 + CA264_14855 0.47 +0.7 3,489,482 + CA264_14855 0.49 -1.2 3,489,517 + CA264_14855 0.54 +0.6 3,489,544 + CA264_14855 0.58 -0.7 3,489,577 + CA264_14855 0.63 -1.4 3,489,578 - CA264_14855 0.63 +0.3 3,489,672 + CA264_14855 0.77 +0.3 3,489,673 - CA264_14855 0.78 -0.4 3,489,711 + CA264_14855 0.83 -1.6 3,489,712 - CA264_14855 0.84 -0.2 3,489,749 - CA264_14855 0.89 -0.7 3,489,841 - +0.3 3,489,909 + -0.0 3,489,929 - +0.0 3,489,947 + +1.0 3,489,991 - -0.4 3,489,993 - +0.7 3,490,067 + CA264_14860 0.16 -0.0 3,490,138 + CA264_14860 0.27 +0.0 3,490,199 + CA264_14860 0.36 +3.3 3,490,201 + CA264_14860 0.36 +0.3 3,490,201 + CA264_14860 0.36 -0.3 3,490,202 - CA264_14860 0.37 -0.6 3,490,397 + CA264_14860 0.66 +0.1 3,490,397 + CA264_14860 0.66 -0.3 3,490,519 - CA264_14860 0.85 +0.9 3,490,577 - -0.5 3,490,681 + -0.2 3,490,739 - +1.1 3,490,743 - +1.2 3,490,743 - -1.3 3,490,832 + CA264_14865 0.11 -0.7 3,490,833 - CA264_14865 0.11 +2.4 3,490,833 - CA264_14865 0.11 +1.6 3,491,025 - CA264_14865 0.25 +2.1 3,491,093 + CA264_14865 0.30 +0.4 3,491,103 - CA264_14865 0.31 +0.5 3,491,129 - CA264_14865 0.33 +0.8 3,491,174 + CA264_14865 0.36 +0.6 3,491,191 + CA264_14865 0.38 +1.2 3,491,192 - CA264_14865 0.38 +1.6 3,491,234 + CA264_14865 0.41 +1.0 3,491,235 - CA264_14865 0.41 -0.4 3,491,237 - CA264_14865 0.41 +0.2 3,491,298 + CA264_14865 0.45 +0.1 3,491,299 - CA264_14865 0.46 +2.8 3,491,299 - CA264_14865 0.46 +1.2 3,491,299 - CA264_14865 0.46 -1.3 3,491,304 - CA264_14865 0.46 +1.2 3,491,308 + CA264_14865 0.46 +2.6 3,491,308 + CA264_14865 0.46 +0.6 3,491,442 + CA264_14865 0.56 +1.2 3,491,616 - CA264_14865 0.69 +1.7
Or see this region's nucleotide sequence