Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_13355 and CA264_13360 overlap by 8 nucleotides CA264_13360 and CA264_13365 are separated by 191 nucleotides
CA264_13355: CA264_13355 - ABC transporter permease, at 3,114,654 to 3,116,009
_13355
CA264_13360: CA264_13360 - ABC transporter ATP-binding protein, at 3,116,002 to 3,116,913
_13360
CA264_13365: CA264_13365 - molecular chaperone DnaJ, at 3,117,105 to 3,118,256
_13365
Position (kb)
3116
3117 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3115.059 kb on + strand, within CA264_13355 at 3115.281 kb on + strand, within CA264_13355 at 3115.386 kb on - strand, within CA264_13355 at 3115.386 kb on - strand, within CA264_13355 at 3115.450 kb on + strand, within CA264_13355 at 3115.450 kb on + strand, within CA264_13355 at 3115.480 kb on - strand, within CA264_13355 at 3115.487 kb on + strand, within CA264_13355 at 3115.487 kb on + strand, within CA264_13355 at 3115.488 kb on - strand, within CA264_13355 at 3115.557 kb on + strand, within CA264_13355 at 3115.653 kb on + strand, within CA264_13355 at 3115.654 kb on - strand, within CA264_13355 at 3115.676 kb on - strand, within CA264_13355 at 3115.720 kb on + strand, within CA264_13355 at 3115.999 kb on - strand at 3115.999 kb on - strand at 3116.003 kb on + strand at 3116.023 kb on + strand at 3116.050 kb on - strand at 3116.083 kb on + strand at 3116.234 kb on + strand, within CA264_13360 at 3116.249 kb on + strand, within CA264_13360 at 3116.260 kb on + strand, within CA264_13360 at 3116.261 kb on - strand, within CA264_13360 at 3116.290 kb on - strand, within CA264_13360 at 3116.290 kb on - strand, within CA264_13360 at 3116.316 kb on + strand, within CA264_13360 at 3116.362 kb on - strand, within CA264_13360 at 3116.566 kb on + strand, within CA264_13360 at 3116.660 kb on + strand, within CA264_13360 at 3116.661 kb on - strand, within CA264_13360 at 3116.917 kb on + strand at 3116.917 kb on + strand at 3116.940 kb on + strand at 3116.940 kb on + strand at 3116.941 kb on - strand at 3116.942 kb on + strand at 3116.944 kb on + strand at 3116.944 kb on + strand at 3116.945 kb on - strand at 3116.959 kb on - strand at 3116.959 kb on - strand at 3116.978 kb on - strand at 3116.989 kb on + strand at 3117.063 kb on + strand at 3117.086 kb on - strand at 3117.087 kb on + strand at 3117.425 kb on - strand, within CA264_13365 at 3117.425 kb on - strand, within CA264_13365
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 3,115,059 + CA264_13355 0.30 +0.6 3,115,281 + CA264_13355 0.46 +0.6 3,115,386 - CA264_13355 0.54 +1.1 3,115,386 - CA264_13355 0.54 +2.4 3,115,450 + CA264_13355 0.59 +0.3 3,115,450 + CA264_13355 0.59 +1.1 3,115,480 - CA264_13355 0.61 +0.6 3,115,487 + CA264_13355 0.61 +2.9 3,115,487 + CA264_13355 0.61 +0.9 3,115,488 - CA264_13355 0.62 -3.0 3,115,557 + CA264_13355 0.67 -0.0 3,115,653 + CA264_13355 0.74 -0.2 3,115,654 - CA264_13355 0.74 +0.2 3,115,676 - CA264_13355 0.75 -1.1 3,115,720 + CA264_13355 0.79 +0.9 3,115,999 - -1.4 3,115,999 - +0.2 3,116,003 + -0.9 3,116,023 + -1.1 3,116,050 - -0.7 3,116,083 + +1.3 3,116,234 + CA264_13360 0.25 +1.4 3,116,249 + CA264_13360 0.27 -0.2 3,116,260 + CA264_13360 0.28 +0.5 3,116,261 - CA264_13360 0.28 +0.9 3,116,290 - CA264_13360 0.32 +1.9 3,116,290 - CA264_13360 0.32 -0.9 3,116,316 + CA264_13360 0.34 +1.9 3,116,362 - CA264_13360 0.39 +0.4 3,116,566 + CA264_13360 0.62 +0.1 3,116,660 + CA264_13360 0.72 +0.3 3,116,661 - CA264_13360 0.72 +0.3 3,116,917 + -0.2 3,116,917 + +0.5 3,116,940 + -0.1 3,116,940 + +0.1 3,116,941 - +0.6 3,116,942 + -0.1 3,116,944 + +0.9 3,116,944 + +0.9 3,116,945 - -0.3 3,116,959 - -0.7 3,116,959 - -0.0 3,116,978 - +1.3 3,116,989 + +0.8 3,117,063 + +1.4 3,117,086 - -0.1 3,117,087 + +0.3 3,117,425 - CA264_13365 0.28 -1.1 3,117,425 - CA264_13365 0.28 +0.6
Or see this region's nucleotide sequence