Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_11405 and CA264_11410 are separated by 57 nucleotides CA264_11410 and CA264_11415 overlap by 8 nucleotides CA264_11415 and CA264_11420 overlap by 4 nucleotides
CA264_11405: CA264_11405 - glycerophosphodiester phosphodiesterase, at 2,643,199 to 2,644,098
_11405
CA264_11410: CA264_11410 - histidine phosphatase family protein, at 2,644,156 to 2,644,755
_11410
CA264_11415: CA264_11415 - carbohydrate kinase, at 2,644,748 to 2,646,208
_11415
CA264_11420: CA264_11420 - sugar kinase, at 2,646,205 to 2,647,665
_11420
Position (kb)
2644
2645
2646
2647 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 2643.779 kb on + strand, within CA264_11405 at 2643.811 kb on - strand, within CA264_11405 at 2643.871 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.903 kb on + strand, within CA264_11405 at 2643.904 kb on - strand, within CA264_11405 at 2643.925 kb on - strand, within CA264_11405 at 2643.989 kb on + strand, within CA264_11405 at 2643.999 kb on - strand, within CA264_11405 at 2644.044 kb on + strand at 2644.058 kb on - strand at 2644.105 kb on + strand at 2644.132 kb on + strand at 2644.133 kb on - strand at 2644.209 kb on + strand at 2644.210 kb on - strand at 2644.286 kb on + strand, within CA264_11410 at 2644.287 kb on - strand, within CA264_11410 at 2644.321 kb on + strand, within CA264_11410 at 2644.327 kb on - strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.378 kb on + strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.381 kb on - strand, within CA264_11410 at 2644.562 kb on + strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.563 kb on - strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.598 kb on + strand, within CA264_11410 at 2644.599 kb on - strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.600 kb on + strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.601 kb on - strand, within CA264_11410 at 2644.694 kb on + strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.695 kb on - strand, within CA264_11410 at 2644.739 kb on - strand at 2644.755 kb on + strand at 2644.762 kb on - strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.772 kb on + strand at 2644.773 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.775 kb on - strand at 2644.776 kb on + strand at 2644.792 kb on + strand at 2644.866 kb on - strand at 2644.892 kb on + strand at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.903 kb on + strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.904 kb on - strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.905 kb on + strand, within CA264_11415 at 2644.925 kb on + strand, within CA264_11415 at 2644.926 kb on - strand, within CA264_11415 at 2645.041 kb on - strand, within CA264_11415 at 2645.066 kb on + strand, within CA264_11415 at 2645.104 kb on - strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.108 kb on + strand, within CA264_11415 at 2645.122 kb on + strand, within CA264_11415 at 2645.169 kb on - strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.185 kb on + strand, within CA264_11415 at 2645.228 kb on + strand, within CA264_11415 at 2645.237 kb on - strand, within CA264_11415 at 2645.298 kb on - strand, within CA264_11415 at 2645.365 kb on - strand, within CA264_11415 at 2645.384 kb on + strand, within CA264_11415 at 2645.385 kb on - strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.557 kb on + strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.558 kb on - strand, within CA264_11415 at 2645.661 kb on + strand, within CA264_11415 at 2645.693 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.695 kb on + strand, within CA264_11415 at 2645.711 kb on + strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.712 kb on - strand, within CA264_11415 at 2645.728 kb on - strand, within CA264_11415 at 2645.821 kb on + strand, within CA264_11415 at 2645.830 kb on + strand, within CA264_11415 at 2645.858 kb on + strand, within CA264_11415 at 2645.904 kb on + strand, within CA264_11415 at 2645.905 kb on - strand, within CA264_11415 at 2645.966 kb on - strand, within CA264_11415 at 2645.971 kb on + strand, within CA264_11415 at 2645.971 kb on + strand, within CA264_11415 at 2645.972 kb on - strand, within CA264_11415 at 2645.987 kb on + strand, within CA264_11415 at 2645.997 kb on - strand, within CA264_11415 at 2645.997 kb on - strand, within CA264_11415 at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.182 kb on + strand at 2646.183 kb on - strand at 2646.183 kb on - strand at 2646.196 kb on - strand at 2646.209 kb on - strand at 2646.255 kb on + strand at 2646.300 kb on - strand at 2646.304 kb on + strand at 2646.305 kb on - strand at 2646.321 kb on + strand at 2646.321 kb on + strand at 2646.322 kb on - strand at 2646.322 kb on - strand at 2646.334 kb on + strand at 2646.370 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.478 kb on + strand, within CA264_11420 at 2646.482 kb on + strand, within CA264_11420 at 2646.487 kb on + strand, within CA264_11420 at 2646.488 kb on - strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.544 kb on + strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.545 kb on - strand, within CA264_11420 at 2646.546 kb on + strand, within CA264_11420 at 2646.582 kb on + strand, within CA264_11420 at 2646.720 kb on - strand, within CA264_11420 at 2646.720 kb on - strand, within CA264_11420 at 2646.790 kb on + strand, within CA264_11420 at 2646.790 kb on + strand, within CA264_11420 at 2646.793 kb on + strand, within CA264_11420 at 2646.793 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.811 kb on + strand, within CA264_11420 at 2646.812 kb on - strand, within CA264_11420 at 2646.854 kb on + strand, within CA264_11420 at 2646.854 kb on + strand, within CA264_11420 at 2646.885 kb on + strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.886 kb on - strand, within CA264_11420 at 2646.964 kb on + strand, within CA264_11420 at 2647.027 kb on + strand, within CA264_11420 at 2647.028 kb on - strand, within CA264_11420 at 2647.029 kb on + strand, within CA264_11420 at 2647.121 kb on + strand, within CA264_11420 at 2647.121 kb on + strand, within CA264_11420 at 2647.122 kb on - strand, within CA264_11420 at 2647.122 kb on - strand, within CA264_11420 at 2647.171 kb on + strand, within CA264_11420 at 2647.195 kb on + strand, within CA264_11420 at 2647.196 kb on - strand, within CA264_11420 at 2647.201 kb on + strand, within CA264_11420 at 2647.201 kb on + strand, within CA264_11420 at 2647.202 kb on - strand, within CA264_11420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 2,643,779 + CA264_11405 0.64 +0.0 2,643,811 - CA264_11405 0.68 +0.5 2,643,871 + CA264_11405 0.75 -0.2 2,643,903 + CA264_11405 0.78 -0.0 2,643,903 + CA264_11405 0.78 +0.9 2,643,904 - CA264_11405 0.78 -0.9 2,643,925 - CA264_11405 0.81 +0.6 2,643,989 + CA264_11405 0.88 -0.3 2,643,999 - CA264_11405 0.89 -2.8 2,644,044 + +0.7 2,644,058 - +0.3 2,644,105 + +2.4 2,644,132 + +0.3 2,644,133 - -0.1 2,644,209 + -0.8 2,644,210 - -0.1 2,644,286 + CA264_11410 0.22 +0.9 2,644,287 - CA264_11410 0.22 -0.3 2,644,321 + CA264_11410 0.28 +0.3 2,644,327 - CA264_11410 0.28 -0.2 2,644,378 + CA264_11410 0.37 +0.5 2,644,378 + CA264_11410 0.37 -0.7 2,644,378 + CA264_11410 0.37 -0.1 2,644,381 - CA264_11410 0.38 -1.0 2,644,381 - CA264_11410 0.38 +1.4 2,644,562 + CA264_11410 0.68 +0.3 2,644,563 - CA264_11410 0.68 +0.7 2,644,563 - CA264_11410 0.68 -0.0 2,644,598 + CA264_11410 0.74 -0.4 2,644,598 + CA264_11410 0.74 +0.9 2,644,599 - CA264_11410 0.74 +0.8 2,644,600 + CA264_11410 0.74 -0.2 2,644,600 + CA264_11410 0.74 -0.0 2,644,600 + CA264_11410 0.74 -1.2 2,644,600 + CA264_11410 0.74 -1.5 2,644,601 - CA264_11410 0.74 -1.1 2,644,601 - CA264_11410 0.74 -0.1 2,644,601 - CA264_11410 0.74 -0.1 2,644,601 - CA264_11410 0.74 -0.1 2,644,694 + CA264_11410 0.90 +0.3 2,644,695 - CA264_11410 0.90 +0.3 2,644,695 - CA264_11410 0.90 +0.5 2,644,739 - -0.2 2,644,755 + +0.1 2,644,762 - +0.6 2,644,772 + +0.0 2,644,772 + +0.4 2,644,772 + -0.7 2,644,773 - +0.9 2,644,775 - -0.0 2,644,775 - -0.5 2,644,775 - -0.4 2,644,776 + +0.8 2,644,792 + +0.7 2,644,866 - +1.3 2,644,892 + +0.3 2,644,903 + CA264_11415 0.11 -0.3 2,644,903 + CA264_11415 0.11 +0.0 2,644,903 + CA264_11415 0.11 -0.5 2,644,904 - CA264_11415 0.11 -2.1 2,644,904 - CA264_11415 0.11 +0.4 2,644,905 + CA264_11415 0.11 +0.0 2,644,905 + CA264_11415 0.11 +0.2 2,644,925 + CA264_11415 0.12 -1.9 2,644,926 - CA264_11415 0.12 -0.1 2,645,041 - CA264_11415 0.20 -0.3 2,645,066 + CA264_11415 0.22 -0.5 2,645,104 - CA264_11415 0.24 -0.5 2,645,108 + CA264_11415 0.25 +0.1 2,645,108 + CA264_11415 0.25 -0.6 2,645,122 + CA264_11415 0.26 -0.9 2,645,169 - CA264_11415 0.29 +0.1 2,645,185 + CA264_11415 0.30 +1.0 2,645,185 + CA264_11415 0.30 -0.7 2,645,228 + CA264_11415 0.33 -1.0 2,645,237 - CA264_11415 0.33 +0.3 2,645,298 - CA264_11415 0.38 -1.3 2,645,365 - CA264_11415 0.42 -0.4 2,645,384 + CA264_11415 0.44 +0.7 2,645,385 - CA264_11415 0.44 -1.0 2,645,557 + CA264_11415 0.55 -0.2 2,645,557 + CA264_11415 0.55 +0.3 2,645,558 - CA264_11415 0.55 +0.9 2,645,558 - CA264_11415 0.55 -1.5 2,645,661 + CA264_11415 0.62 -0.4 2,645,693 + CA264_11415 0.65 -0.3 2,645,695 + CA264_11415 0.65 -0.6 2,645,695 + CA264_11415 0.65 +1.2 2,645,695 + CA264_11415 0.65 -0.0 2,645,711 + CA264_11415 0.66 -0.7 2,645,712 - CA264_11415 0.66 +1.5 2,645,712 - CA264_11415 0.66 -0.7 2,645,712 - CA264_11415 0.66 -1.1 2,645,728 - CA264_11415 0.67 -1.6 2,645,821 + CA264_11415 0.73 -1.1 2,645,830 + CA264_11415 0.74 -1.1 2,645,858 + CA264_11415 0.76 +0.4 2,645,904 + CA264_11415 0.79 +1.3 2,645,905 - CA264_11415 0.79 +0.7 2,645,966 - CA264_11415 0.83 -0.2 2,645,971 + CA264_11415 0.84 -0.2 2,645,971 + CA264_11415 0.84 -0.9 2,645,972 - CA264_11415 0.84 -0.1 2,645,987 + CA264_11415 0.85 +0.7 2,645,997 - CA264_11415 0.85 +0.0 2,645,997 - CA264_11415 0.85 -0.5 2,646,182 + -1.7 2,646,182 + -0.1 2,646,182 + +0.5 2,646,182 + +1.4 2,646,182 + -0.7 2,646,183 - +0.5 2,646,183 - -0.0 2,646,196 - -0.3 2,646,209 - -1.1 2,646,255 + -0.4 2,646,300 - -0.9 2,646,304 + +0.4 2,646,305 - +0.2 2,646,321 + -0.7 2,646,321 + -0.3 2,646,322 - -0.2 2,646,322 - -0.7 2,646,334 + +0.5 2,646,370 + CA264_11420 0.11 -1.9 2,646,478 + CA264_11420 0.19 -2.1 2,646,478 + CA264_11420 0.19 -0.4 2,646,478 + CA264_11420 0.19 -0.6 2,646,478 + CA264_11420 0.19 +0.3 2,646,482 + CA264_11420 0.19 +1.6 2,646,487 + CA264_11420 0.19 -0.5 2,646,488 - CA264_11420 0.19 -1.0 2,646,544 + CA264_11420 0.23 -0.5 2,646,544 + CA264_11420 0.23 -1.7 2,646,544 + CA264_11420 0.23 +1.1 2,646,545 - CA264_11420 0.23 +3.4 2,646,545 - CA264_11420 0.23 -0.8 2,646,545 - CA264_11420 0.23 -0.9 2,646,546 + CA264_11420 0.23 -1.1 2,646,582 + CA264_11420 0.26 -3.3 2,646,720 - CA264_11420 0.35 +0.3 2,646,720 - CA264_11420 0.35 -0.3 2,646,790 + CA264_11420 0.40 -0.7 2,646,790 + CA264_11420 0.40 +0.5 2,646,793 + CA264_11420 0.40 +0.6 2,646,793 + CA264_11420 0.40 +0.7 2,646,811 + CA264_11420 0.41 -0.4 2,646,811 + CA264_11420 0.41 -0.7 2,646,811 + CA264_11420 0.41 +0.4 2,646,812 - CA264_11420 0.42 -1.1 2,646,854 + CA264_11420 0.44 -1.3 2,646,854 + CA264_11420 0.44 +0.0 2,646,885 + CA264_11420 0.47 +0.6 2,646,886 - CA264_11420 0.47 +0.6 2,646,886 - CA264_11420 0.47 +0.3 2,646,886 - CA264_11420 0.47 -0.1 2,646,964 + CA264_11420 0.52 -0.1 2,647,027 + CA264_11420 0.56 +0.7 2,647,028 - CA264_11420 0.56 -1.5 2,647,029 + CA264_11420 0.56 -0.7 2,647,121 + CA264_11420 0.63 -0.4 2,647,121 + CA264_11420 0.63 +0.9 2,647,122 - CA264_11420 0.63 +0.1 2,647,122 - CA264_11420 0.63 +0.5 2,647,171 + CA264_11420 0.66 +0.9 2,647,195 + CA264_11420 0.68 +0.1 2,647,196 - CA264_11420 0.68 +1.7 2,647,201 + CA264_11420 0.68 -1.1 2,647,201 + CA264_11420 0.68 -0.0 2,647,202 - CA264_11420 0.68 -0.8
Or see this region's nucleotide sequence