Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_07370 and CA264_07375 are separated by 418 nucleotides CA264_07375 and CA264_07380 are separated by 91 nucleotides
CA264_07370: CA264_07370 - TetR family transcriptional regulator, at 1,699,030 to 1,699,650
_07370
CA264_07375: CA264_07375 - NADH-dependent alcohol dehydrogenase, at 1,700,069 to 1,701,226
_07375
CA264_07380: CA264_07380 - NADP-dependent oxidoreductase, at 1,701,318 to 1,702,331
_07380
Position (kb)
1700
1701
1702 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1699.099 kb on + strand, within CA264_07370 at 1699.100 kb on - strand, within CA264_07370 at 1699.105 kb on - strand, within CA264_07370 at 1699.221 kb on + strand, within CA264_07370 at 1699.224 kb on - strand, within CA264_07370 at 1699.281 kb on - strand, within CA264_07370 at 1699.297 kb on + strand, within CA264_07370 at 1699.298 kb on - strand, within CA264_07370 at 1699.318 kb on + strand, within CA264_07370 at 1699.389 kb on + strand, within CA264_07370 at 1699.443 kb on + strand, within CA264_07370 at 1699.450 kb on + strand, within CA264_07370 at 1699.554 kb on + strand, within CA264_07370 at 1699.572 kb on + strand, within CA264_07370 at 1699.668 kb on + strand at 1699.684 kb on + strand at 1699.685 kb on - strand at 1699.685 kb on - strand at 1699.685 kb on - strand at 1699.749 kb on + strand at 1699.750 kb on - strand at 1699.750 kb on - strand at 1699.750 kb on - strand at 1699.753 kb on - strand at 1699.762 kb on - strand at 1699.838 kb on + strand at 1699.849 kb on + strand at 1699.964 kb on - strand at 1700.007 kb on - strand at 1700.197 kb on - strand, within CA264_07375 at 1700.348 kb on - strand, within CA264_07375 at 1700.430 kb on + strand, within CA264_07375 at 1700.515 kb on + strand, within CA264_07375 at 1700.520 kb on + strand, within CA264_07375 at 1700.625 kb on + strand, within CA264_07375 at 1700.626 kb on - strand, within CA264_07375 at 1700.690 kb on - strand, within CA264_07375 at 1700.690 kb on - strand, within CA264_07375 at 1700.765 kb on - strand, within CA264_07375 at 1700.821 kb on + strand, within CA264_07375 at 1700.933 kb on + strand, within CA264_07375 at 1700.952 kb on - strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1700.993 kb on + strand, within CA264_07375 at 1701.015 kb on + strand, within CA264_07375 at 1701.041 kb on - strand, within CA264_07375 at 1701.055 kb on - strand, within CA264_07375 at 1701.121 kb on - strand at 1701.162 kb on - strand at 1701.208 kb on - strand at 1701.233 kb on + strand at 1701.236 kb on + strand at 1701.245 kb on + strand at 1701.258 kb on + strand at 1701.282 kb on + strand at 1701.282 kb on + strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.283 kb on - strand at 1701.288 kb on + strand at 1701.289 kb on - strand at 1701.289 kb on - strand at 1701.299 kb on + strand at 1701.300 kb on - strand at 1701.313 kb on + strand at 1701.505 kb on - strand, within CA264_07380 at 1701.584 kb on + strand, within CA264_07380 at 1701.586 kb on + strand, within CA264_07380 at 1701.587 kb on - strand, within CA264_07380 at 1701.587 kb on - strand, within CA264_07380 at 1701.589 kb on + strand, within CA264_07380 at 1701.590 kb on - strand, within CA264_07380 at 1701.640 kb on + strand, within CA264_07380 at 1701.641 kb on - strand, within CA264_07380 at 1701.655 kb on - strand, within CA264_07380 at 1701.679 kb on + strand, within CA264_07380 at 1701.679 kb on + strand, within CA264_07380 at 1701.680 kb on - strand, within CA264_07380 at 1701.680 kb on - strand, within CA264_07380 at 1701.682 kb on - strand, within CA264_07380 at 1701.682 kb on - strand, within CA264_07380 at 1701.741 kb on - strand, within CA264_07380 at 1702.115 kb on + strand, within CA264_07380 at 1702.115 kb on + strand, within CA264_07380 at 1702.124 kb on + strand, within CA264_07380 at 1702.128 kb on - strand, within CA264_07380 at 1702.144 kb on + strand, within CA264_07380 at 1702.145 kb on - strand, within CA264_07380 at 1702.156 kb on + strand, within CA264_07380 at 1702.156 kb on + strand, within CA264_07380 at 1702.157 kb on - strand, within CA264_07380 at 1702.157 kb on - strand, within CA264_07380 at 1702.163 kb on + strand, within CA264_07380 at 1702.163 kb on + strand, within CA264_07380 at 1702.190 kb on - strand, within CA264_07380 at 1702.208 kb on - strand, within CA264_07380
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 1,699,099 + CA264_07370 0.11 +0.1 1,699,100 - CA264_07370 0.11 +0.3 1,699,105 - CA264_07370 0.12 -1.9 1,699,221 + CA264_07370 0.31 -0.1 1,699,224 - CA264_07370 0.31 +0.2 1,699,281 - CA264_07370 0.40 +0.3 1,699,297 + CA264_07370 0.43 -0.8 1,699,298 - CA264_07370 0.43 -1.1 1,699,318 + CA264_07370 0.46 -0.2 1,699,389 + CA264_07370 0.58 -0.8 1,699,443 + CA264_07370 0.67 -0.5 1,699,450 + CA264_07370 0.68 -1.5 1,699,554 + CA264_07370 0.84 +0.5 1,699,572 + CA264_07370 0.87 +0.1 1,699,668 + +0.1 1,699,684 + +0.7 1,699,685 - -0.4 1,699,685 - -0.7 1,699,685 - +0.6 1,699,749 + -1.0 1,699,750 - +0.0 1,699,750 - -0.8 1,699,750 - +0.0 1,699,753 - +2.5 1,699,762 - -0.1 1,699,838 + +0.1 1,699,849 + +0.6 1,699,964 - +0.9 1,700,007 - +0.4 1,700,197 - CA264_07375 0.11 +0.2 1,700,348 - CA264_07375 0.24 -0.2 1,700,430 + CA264_07375 0.31 -1.1 1,700,515 + CA264_07375 0.39 -1.3 1,700,520 + CA264_07375 0.39 +0.5 1,700,625 + CA264_07375 0.48 +2.5 1,700,626 - CA264_07375 0.48 +0.6 1,700,690 - CA264_07375 0.54 -0.8 1,700,690 - CA264_07375 0.54 +0.2 1,700,765 - CA264_07375 0.60 -0.2 1,700,821 + CA264_07375 0.65 -0.6 1,700,933 + CA264_07375 0.75 +1.0 1,700,952 - CA264_07375 0.76 -0.1 1,700,993 + CA264_07375 0.80 -0.6 1,700,993 + CA264_07375 0.80 +0.4 1,700,993 + CA264_07375 0.80 +0.6 1,701,015 + CA264_07375 0.82 -0.5 1,701,041 - CA264_07375 0.84 +0.1 1,701,055 - CA264_07375 0.85 -0.4 1,701,121 - -1.5 1,701,162 - +0.9 1,701,208 - +0.5 1,701,233 + -0.7 1,701,236 + +0.6 1,701,245 + +1.2 1,701,258 + -0.5 1,701,282 + -1.3 1,701,282 + -0.3 1,701,283 - +0.6 1,701,283 - -1.5 1,701,283 - -0.4 1,701,288 + -2.3 1,701,289 - -0.6 1,701,289 - -0.8 1,701,299 + -0.7 1,701,300 - -2.1 1,701,313 + +0.1 1,701,505 - CA264_07380 0.18 -1.1 1,701,584 + CA264_07380 0.26 -1.1 1,701,586 + CA264_07380 0.26 -1.5 1,701,587 - CA264_07380 0.27 -0.1 1,701,587 - CA264_07380 0.27 -0.1 1,701,589 + CA264_07380 0.27 -1.1 1,701,590 - CA264_07380 0.27 -0.2 1,701,640 + CA264_07380 0.32 -0.5 1,701,641 - CA264_07380 0.32 -0.1 1,701,655 - CA264_07380 0.33 -0.6 1,701,679 + CA264_07380 0.36 +0.2 1,701,679 + CA264_07380 0.36 -1.6 1,701,680 - CA264_07380 0.36 -1.1 1,701,680 - CA264_07380 0.36 +0.1 1,701,682 - CA264_07380 0.36 +0.8 1,701,682 - CA264_07380 0.36 +0.4 1,701,741 - CA264_07380 0.42 -0.6 1,702,115 + CA264_07380 0.79 +0.9 1,702,115 + CA264_07380 0.79 +0.4 1,702,124 + CA264_07380 0.79 -0.4 1,702,128 - CA264_07380 0.80 -0.3 1,702,144 + CA264_07380 0.81 -1.1 1,702,145 - CA264_07380 0.82 -0.6 1,702,156 + CA264_07380 0.83 +1.6 1,702,156 + CA264_07380 0.83 +0.0 1,702,157 - CA264_07380 0.83 +0.9 1,702,157 - CA264_07380 0.83 -0.7 1,702,163 + CA264_07380 0.83 -0.7 1,702,163 + CA264_07380 0.83 -1.1 1,702,190 - CA264_07380 0.86 -0.4 1,702,208 - CA264_07380 0.88 -0.1
Or see this region's nucleotide sequence