Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06605 and CA264_06610 are separated by 194 nucleotides CA264_06610 and CA264_06615 are separated by 43 nucleotides
CA264_06605: CA264_06605 - ketoacyl-ACP synthase III, at 1,521,759 to 1,522,757
_06605
CA264_06610: CA264_06610 - iron-dependent repressor, at 1,522,952 to 1,523,611
_06610
CA264_06615: CA264_06615 - iron/manganese transporter, at 1,523,655 to 1,525,538
_06615
Position (kb)
1522
1523
1524 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 1522.018 kb on - strand, within CA264_06605 at 1522.073 kb on - strand, within CA264_06605 at 1522.092 kb on - strand, within CA264_06605 at 1522.113 kb on + strand, within CA264_06605 at 1522.113 kb on + strand, within CA264_06605 at 1522.114 kb on - strand, within CA264_06605 at 1522.142 kb on - strand, within CA264_06605 at 1522.155 kb on + strand, within CA264_06605 at 1522.156 kb on - strand, within CA264_06605 at 1522.211 kb on + strand, within CA264_06605 at 1522.211 kb on + strand, within CA264_06605 at 1522.235 kb on + strand, within CA264_06605 at 1522.304 kb on + strand, within CA264_06605 at 1522.442 kb on + strand, within CA264_06605 at 1522.502 kb on + strand, within CA264_06605 at 1522.503 kb on - strand, within CA264_06605 at 1522.560 kb on + strand, within CA264_06605 at 1522.560 kb on + strand, within CA264_06605 at 1522.560 kb on + strand, within CA264_06605 at 1522.597 kb on + strand, within CA264_06605 at 1522.598 kb on - strand, within CA264_06605 at 1522.598 kb on - strand, within CA264_06605 at 1522.613 kb on + strand, within CA264_06605 at 1522.613 kb on + strand, within CA264_06605 at 1522.613 kb on + strand, within CA264_06605 at 1522.614 kb on - strand, within CA264_06605 at 1522.617 kb on + strand, within CA264_06605 at 1522.617 kb on + strand, within CA264_06605 at 1522.618 kb on - strand, within CA264_06605 at 1522.665 kb on + strand at 1522.744 kb on + strand at 1522.744 kb on + strand at 1522.745 kb on - strand at 1522.755 kb on + strand at 1522.756 kb on - strand at 1522.756 kb on - strand at 1522.773 kb on - strand at 1522.831 kb on + strand at 1522.853 kb on + strand at 1522.853 kb on + strand at 1522.854 kb on - strand at 1522.888 kb on + strand at 1522.899 kb on + strand at 1522.900 kb on - strand at 1522.941 kb on + strand at 1522.964 kb on + strand at 1522.983 kb on + strand at 1522.984 kb on - strand at 1522.994 kb on + strand at 1522.994 kb on + strand at 1523.117 kb on + strand, within CA264_06610 at 1523.117 kb on + strand, within CA264_06610 at 1523.117 kb on + strand, within CA264_06610 at 1523.117 kb on + strand, within CA264_06610 at 1523.122 kb on - strand, within CA264_06610 at 1523.122 kb on - strand, within CA264_06610 at 1523.126 kb on + strand, within CA264_06610 at 1523.126 kb on + strand, within CA264_06610 at 1523.129 kb on - strand, within CA264_06610 at 1523.399 kb on - strand, within CA264_06610 at 1523.501 kb on - strand, within CA264_06610 at 1523.518 kb on - strand, within CA264_06610 at 1523.597 kb on + strand at 1523.597 kb on + strand at 1523.597 kb on + strand at 1523.598 kb on - strand at 1523.598 kb on - strand at 1523.601 kb on + strand at 1523.601 kb on + strand at 1523.601 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 1,522,018 - CA264_06605 0.26 -1.8 1,522,073 - CA264_06605 0.31 -1.5 1,522,092 - CA264_06605 0.33 -0.7 1,522,113 + CA264_06605 0.35 -0.0 1,522,113 + CA264_06605 0.35 +0.3 1,522,114 - CA264_06605 0.36 -1.4 1,522,142 - CA264_06605 0.38 -1.5 1,522,155 + CA264_06605 0.40 -1.1 1,522,156 - CA264_06605 0.40 -1.5 1,522,211 + CA264_06605 0.45 +1.0 1,522,211 + CA264_06605 0.45 +0.6 1,522,235 + CA264_06605 0.48 +0.1 1,522,304 + CA264_06605 0.55 +1.5 1,522,442 + CA264_06605 0.68 +0.9 1,522,502 + CA264_06605 0.74 +0.5 1,522,503 - CA264_06605 0.74 -1.9 1,522,560 + CA264_06605 0.80 +0.6 1,522,560 + CA264_06605 0.80 +0.7 1,522,560 + CA264_06605 0.80 -0.5 1,522,597 + CA264_06605 0.84 +1.7 1,522,598 - CA264_06605 0.84 -0.1 1,522,598 - CA264_06605 0.84 -1.3 1,522,613 + CA264_06605 0.85 +1.2 1,522,613 + CA264_06605 0.85 +1.3 1,522,613 + CA264_06605 0.85 +0.2 1,522,614 - CA264_06605 0.86 -1.1 1,522,617 + CA264_06605 0.86 -0.0 1,522,617 + CA264_06605 0.86 +1.0 1,522,618 - CA264_06605 0.86 -2.5 1,522,665 + +0.6 1,522,744 + +0.9 1,522,744 + +0.1 1,522,745 - -0.2 1,522,755 + -0.7 1,522,756 - +1.3 1,522,756 - -0.9 1,522,773 - -1.2 1,522,831 + -0.4 1,522,853 + +0.9 1,522,853 + +1.1 1,522,854 - +0.3 1,522,888 + +0.7 1,522,899 + +1.0 1,522,900 - -1.0 1,522,941 + +1.3 1,522,964 + +0.1 1,522,983 + +0.9 1,522,984 - -0.4 1,522,994 + +1.8 1,522,994 + +2.0 1,523,117 + CA264_06610 0.25 +1.4 1,523,117 + CA264_06610 0.25 -1.9 1,523,117 + CA264_06610 0.25 -0.6 1,523,117 + CA264_06610 0.25 -0.1 1,523,122 - CA264_06610 0.26 -0.1 1,523,122 - CA264_06610 0.26 -0.1 1,523,126 + CA264_06610 0.26 -0.0 1,523,126 + CA264_06610 0.26 +0.4 1,523,129 - CA264_06610 0.27 -1.1 1,523,399 - CA264_06610 0.68 -0.8 1,523,501 - CA264_06610 0.83 -0.1 1,523,518 - CA264_06610 0.86 -0.1 1,523,597 + +0.6 1,523,597 + +0.9 1,523,597 + +1.4 1,523,598 - +0.7 1,523,598 - +0.5 1,523,601 + +0.4 1,523,601 + +0.9 1,523,601 + +1.1
Or see this region's nucleotide sequence