Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_06110 and CA264_06115 are separated by 165 nucleotides CA264_06115 and CA264_06120 are separated by 6 nucleotides CA264_06120 and CA264_06125 are separated by 99 nucleotides
CA264_06110: CA264_06110 - hypothetical protein, at 1,427,208 to 1,428,164
_06110
CA264_06115: CA264_06115 - acyl-CoA thioesterase, at 1,428,330 to 1,428,863
_06115
CA264_06120: CA264_06120 - hypothetical protein, at 1,428,870 to 1,429,535
_06120
CA264_06125: CA264_06125 - alkyl hydroperoxide reductase, at 1,429,635 to 1,430,753
_06125
Position (kb)
1428
1429 Strain fitness (log2 ratio)
-1
0
1
2
3 at 1427.400 kb on + strand, within CA264_06110 at 1427.400 kb on + strand, within CA264_06110 at 1427.400 kb on + strand, within CA264_06110 at 1427.401 kb on - strand, within CA264_06110 at 1427.401 kb on - strand, within CA264_06110 at 1427.404 kb on + strand, within CA264_06110 at 1427.500 kb on - strand, within CA264_06110 at 1427.610 kb on + strand, within CA264_06110 at 1427.611 kb on - strand, within CA264_06110 at 1427.665 kb on + strand, within CA264_06110 at 1427.804 kb on + strand, within CA264_06110 at 1427.805 kb on - strand, within CA264_06110 at 1427.834 kb on + strand, within CA264_06110 at 1427.834 kb on + strand, within CA264_06110 at 1428.000 kb on - strand, within CA264_06110 at 1428.028 kb on - strand, within CA264_06110 at 1428.030 kb on + strand, within CA264_06110 at 1428.031 kb on - strand, within CA264_06110 at 1428.060 kb on + strand, within CA264_06110 at 1428.060 kb on + strand, within CA264_06110 at 1428.117 kb on + strand at 1428.171 kb on + strand at 1428.223 kb on - strand at 1428.238 kb on + strand at 1428.428 kb on + strand, within CA264_06115 at 1428.530 kb on + strand, within CA264_06115 at 1428.531 kb on - strand, within CA264_06115 at 1428.538 kb on + strand, within CA264_06115 at 1428.539 kb on - strand, within CA264_06115 at 1428.550 kb on + strand, within CA264_06115 at 1428.581 kb on + strand, within CA264_06115 at 1428.581 kb on + strand, within CA264_06115 at 1428.591 kb on - strand, within CA264_06115 at 1428.625 kb on + strand, within CA264_06115 at 1428.626 kb on - strand, within CA264_06115 at 1428.626 kb on - strand, within CA264_06115 at 1428.679 kb on + strand, within CA264_06115 at 1428.745 kb on + strand, within CA264_06115 at 1428.746 kb on - strand, within CA264_06115 at 1428.747 kb on + strand, within CA264_06115 at 1428.838 kb on - strand at 1428.866 kb on - strand at 1429.538 kb on + strand at 1429.658 kb on + strand at 1429.740 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 1,427,400 + CA264_06110 0.20 +0.1 1,427,400 + CA264_06110 0.20 +0.1 1,427,400 + CA264_06110 0.20 +1.4 1,427,401 - CA264_06110 0.20 +0.3 1,427,401 - CA264_06110 0.20 -1.6 1,427,404 + CA264_06110 0.20 +1.2 1,427,500 - CA264_06110 0.31 -1.5 1,427,610 + CA264_06110 0.42 +0.4 1,427,611 - CA264_06110 0.42 -0.9 1,427,665 + CA264_06110 0.48 -0.1 1,427,804 + CA264_06110 0.62 -0.7 1,427,805 - CA264_06110 0.62 -1.7 1,427,834 + CA264_06110 0.65 -0.5 1,427,834 + CA264_06110 0.65 +0.9 1,428,000 - CA264_06110 0.83 -1.0 1,428,028 - CA264_06110 0.86 +2.9 1,428,030 + CA264_06110 0.86 +0.6 1,428,031 - CA264_06110 0.86 -0.1 1,428,060 + CA264_06110 0.89 +0.9 1,428,060 + CA264_06110 0.89 +0.4 1,428,117 + -0.3 1,428,171 + -1.3 1,428,223 - +0.2 1,428,238 + +0.7 1,428,428 + CA264_06115 0.18 +0.1 1,428,530 + CA264_06115 0.37 -0.1 1,428,531 - CA264_06115 0.38 -0.3 1,428,538 + CA264_06115 0.39 +0.7 1,428,539 - CA264_06115 0.39 +0.0 1,428,550 + CA264_06115 0.41 -0.6 1,428,581 + CA264_06115 0.47 -1.3 1,428,581 + CA264_06115 0.47 -0.9 1,428,591 - CA264_06115 0.49 -0.9 1,428,625 + CA264_06115 0.55 +0.5 1,428,626 - CA264_06115 0.55 -0.5 1,428,626 - CA264_06115 0.55 +0.5 1,428,679 + CA264_06115 0.65 +0.0 1,428,745 + CA264_06115 0.78 -0.5 1,428,746 - CA264_06115 0.78 -0.1 1,428,747 + CA264_06115 0.78 +1.3 1,428,838 - -0.1 1,428,866 - +0.9 1,429,538 + +1.9 1,429,658 + -0.0 1,429,740 - +0.9
Or see this region's nucleotide sequence