Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03770 and CA264_03775 are separated by 153 nucleotides CA264_03775 and CA264_03780 are separated by 104 nucleotides
CA264_03770: CA264_03770 - type I glyceraldehyde-3-phosphate dehydrogenase, at 884,004 to 884,996
_03770
CA264_03775: CA264_03775 - hypothetical protein, at 885,150 to 886,034
_03775
CA264_03780: CA264_03780 - diacylglycerol kinase, at 886,139 to 887,020
_03780
Position (kb) 885
886
887 Strain fitness (log2 ratio) -2
-1
0
1
2 at 885.068 kb on + strand at 885.087 kb on + strand at 885.104 kb on + strand at 885.104 kb on + strand at 885.104 kb on + strand at 885.105 kb on - strand at 885.106 kb on + strand at 885.106 kb on + strand at 885.107 kb on - strand at 885.107 kb on - strand at 885.107 kb on - strand at 885.140 kb on + strand at 885.167 kb on + strand at 885.196 kb on + strand at 885.309 kb on + strand, within CA264_03775 at 885.370 kb on + strand, within CA264_03775 at 885.681 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.752 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.755 kb on - strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.756 kb on + strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.757 kb on - strand, within CA264_03775 at 885.765 kb on - strand, within CA264_03775 at 885.829 kb on - strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.843 kb on + strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.844 kb on - strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.845 kb on + strand, within CA264_03775 at 885.962 kb on - strand at 886.033 kb on - strand at 886.049 kb on + strand at 886.087 kb on - strand at 886.087 kb on - strand at 886.088 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 885,068 + -0.3 885,087 + -0.2 885,104 + -0.2 885,104 + +0.7 885,104 + -0.3 885,105 - -1.4 885,106 + +0.3 885,106 + +0.5 885,107 - +0.4 885,107 - -1.9 885,107 - +1.6 885,140 + +2.3 885,167 + +0.9 885,196 + -1.4 885,309 + CA264_03775 0.18 +1.4 885,370 + CA264_03775 0.25 -0.1 885,681 - CA264_03775 0.60 +0.1 885,752 - CA264_03775 0.68 -0.6 885,752 - CA264_03775 0.68 +0.4 885,752 - CA264_03775 0.68 +2.2 885,755 - CA264_03775 0.68 +0.9 885,755 - CA264_03775 0.68 -0.6 885,755 - CA264_03775 0.68 -0.5 885,756 + CA264_03775 0.68 +0.5 885,756 + CA264_03775 0.68 +0.1 885,757 - CA264_03775 0.69 -0.3 885,757 - CA264_03775 0.69 +1.9 885,757 - CA264_03775 0.69 +0.1 885,757 - CA264_03775 0.69 -1.1 885,765 - CA264_03775 0.69 +0.1 885,829 - CA264_03775 0.77 -0.5 885,843 + CA264_03775 0.78 -0.1 885,843 + CA264_03775 0.78 -0.5 885,843 + CA264_03775 0.78 +0.8 885,844 - CA264_03775 0.78 +0.8 885,844 - CA264_03775 0.78 +1.8 885,844 - CA264_03775 0.78 -1.1 885,845 + CA264_03775 0.79 -0.5 885,845 + CA264_03775 0.79 -1.6 885,962 - +0.9 886,033 - -0.4 886,049 + -0.2 886,087 - -0.2 886,087 - +0.4 886,088 + +0.7
Or see this region's nucleotide sequence