Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03425 and CA264_03430 are separated by 11 nucleotides CA264_03430 and CA264_03435 are separated by 301 nucleotides CA264_03435 and CA264_03440 are separated by 246 nucleotides CA264_03440 and CA264_03445 are separated by 341 nucleotides
CA264_03425: CA264_03425 - glutathione-dependent formaldehyde dehydrogenase, at 798,694 to 799,848
_03425
CA264_03430: CA264_03430 - hypothetical protein, at 799,860 to 800,345
_03430
CA264_03435: CA264_03435 - hypothetical protein, at 800,647 to 801,348
_03435
CA264_03440: CA264_03440 - DoxX family protein, at 801,595 to 801,993
_03440
CA264_03445: CA264_03445 - anhydro-N-acetylmuramic acid kinase, at 802,335 to 803,534
_03445
Position (kb) 800
801
802 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 799.804 kb on - strand at 799.839 kb on + strand at 799.839 kb on + strand at 799.839 kb on + strand at 799.859 kb on + strand at 799.859 kb on + strand at 799.859 kb on + strand at 799.881 kb on + strand at 799.881 kb on + strand at 799.881 kb on + strand at 799.882 kb on - strand at 799.889 kb on + strand at 799.890 kb on - strand at 799.890 kb on - strand at 799.890 kb on - strand at 799.890 kb on - strand at 800.012 kb on + strand, within CA264_03430 at 800.012 kb on - strand, within CA264_03430 at 800.012 kb on - strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.111 kb on + strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.112 kb on - strand, within CA264_03430 at 800.116 kb on - strand, within CA264_03430 at 800.116 kb on - strand, within CA264_03430 at 800.150 kb on + strand, within CA264_03430 at 800.150 kb on + strand, within CA264_03430 at 800.151 kb on - strand, within CA264_03430 at 800.167 kb on + strand, within CA264_03430 at 800.258 kb on + strand, within CA264_03430 at 800.259 kb on - strand, within CA264_03430 at 800.259 kb on - strand, within CA264_03430 at 800.344 kb on - strand at 800.386 kb on + strand at 800.386 kb on + strand at 800.386 kb on + strand at 800.387 kb on - strand at 800.465 kb on + strand at 800.475 kb on + strand at 800.478 kb on + strand at 800.492 kb on - strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.521 kb on + strand at 800.530 kb on - strand at 800.535 kb on - strand at 800.535 kb on - strand at 800.546 kb on + strand at 800.547 kb on - strand at 800.547 kb on - strand at 800.567 kb on + strand at 800.567 kb on + strand at 800.569 kb on + strand at 800.574 kb on + strand at 800.574 kb on + strand at 800.575 kb on - strand at 800.614 kb on - strand at 800.618 kb on + strand at 800.618 kb on + strand at 800.619 kb on - strand at 800.619 kb on - strand at 800.621 kb on - strand at 800.658 kb on + strand at 800.811 kb on - strand, within CA264_03435 at 800.846 kb on - strand, within CA264_03435 at 800.857 kb on + strand, within CA264_03435 at 800.977 kb on + strand, within CA264_03435 at 801.040 kb on + strand, within CA264_03435 at 801.041 kb on - strand, within CA264_03435 at 801.043 kb on + strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.080 kb on - strand, within CA264_03435 at 801.128 kb on + strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.129 kb on - strand, within CA264_03435 at 801.183 kb on + strand, within CA264_03435 at 801.195 kb on + strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.196 kb on - strand, within CA264_03435 at 801.287 kb on + strand at 801.288 kb on - strand at 801.401 kb on + strand at 801.427 kb on + strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.428 kb on - strand at 801.429 kb on + strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.430 kb on - strand at 801.475 kb on - strand at 801.489 kb on + strand at 801.489 kb on + strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.490 kb on - strand at 801.498 kb on - strand at 801.547 kb on + strand at 801.549 kb on + strand at 801.553 kb on + strand at 801.554 kb on - strand at 801.554 kb on - strand at 801.567 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.604 kb on + strand at 801.666 kb on + strand, within CA264_03440 at 801.667 kb on - strand, within CA264_03440 at 801.775 kb on - strand, within CA264_03440 at 801.907 kb on + strand, within CA264_03440 at 801.908 kb on - strand, within CA264_03440 at 801.925 kb on + strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.926 kb on - strand, within CA264_03440 at 801.984 kb on + strand at 802.004 kb on + strand at 802.010 kb on + strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.011 kb on - strand at 802.013 kb on + strand at 802.014 kb on - strand at 802.074 kb on - strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.077 kb on + strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.078 kb on - strand at 802.110 kb on + strand at 802.111 kb on - strand at 802.111 kb on - strand at 802.117 kb on - strand at 802.117 kb on - strand at 802.217 kb on - strand at 802.229 kb on + strand at 802.230 kb on - strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.231 kb on + strand at 802.232 kb on - strand at 802.238 kb on + strand at 802.238 kb on + strand at 802.324 kb on + strand at 802.324 kb on + strand at 802.325 kb on - strand at 802.334 kb on + strand at 802.335 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 799,804 - +0.5 799,839 + +0.6 799,839 + -0.1 799,839 + +0.5 799,859 + -1.2 799,859 + -0.7 799,859 + -0.3 799,881 + -1.1 799,881 + +0.2 799,881 + +0.6 799,882 - -0.4 799,889 + -1.1 799,890 - -0.6 799,890 - -0.3 799,890 - +0.9 799,890 - -0.7 800,012 + CA264_03430 0.31 +0.2 800,012 - CA264_03430 0.31 -1.2 800,012 - CA264_03430 0.31 +0.3 800,111 + CA264_03430 0.52 +0.1 800,111 + CA264_03430 0.52 +0.0 800,111 + CA264_03430 0.52 -0.5 800,112 - CA264_03430 0.52 +0.9 800,112 - CA264_03430 0.52 +0.3 800,112 - CA264_03430 0.52 -0.3 800,112 - CA264_03430 0.52 -0.4 800,116 - CA264_03430 0.53 +0.7 800,116 - CA264_03430 0.53 -0.8 800,150 + CA264_03430 0.60 +0.5 800,150 + CA264_03430 0.60 +0.6 800,151 - CA264_03430 0.60 +0.9 800,167 + CA264_03430 0.63 +0.8 800,258 + CA264_03430 0.82 +1.1 800,259 - CA264_03430 0.82 +0.5 800,259 - CA264_03430 0.82 -1.0 800,344 - +0.2 800,386 + +0.2 800,386 + -1.7 800,386 + +0.6 800,387 - -0.1 800,465 + -0.8 800,475 + -1.1 800,478 + -1.7 800,492 - -0.7 800,521 + +1.1 800,521 + +0.7 800,521 + -0.1 800,521 + -0.0 800,530 - +0.0 800,535 - +0.4 800,535 - +0.9 800,546 + +0.3 800,547 - -0.3 800,547 - +0.5 800,567 + -0.1 800,567 + -0.2 800,569 + -1.1 800,574 + +0.8 800,574 + +0.7 800,575 - +0.3 800,614 - +0.2 800,618 + -0.7 800,618 + +1.9 800,619 - -0.1 800,619 - -0.3 800,621 - -1.1 800,658 + -0.1 800,811 - CA264_03435 0.23 +0.4 800,846 - CA264_03435 0.28 +1.0 800,857 + CA264_03435 0.30 -0.3 800,977 + CA264_03435 0.47 +0.7 801,040 + CA264_03435 0.56 +0.2 801,041 - CA264_03435 0.56 +1.0 801,043 + CA264_03435 0.56 -0.4 801,080 - CA264_03435 0.62 +0.9 801,080 - CA264_03435 0.62 +0.8 801,128 + CA264_03435 0.69 +0.9 801,129 - CA264_03435 0.69 +1.4 801,129 - CA264_03435 0.69 -1.9 801,129 - CA264_03435 0.69 -0.5 801,183 + CA264_03435 0.76 -0.4 801,195 + CA264_03435 0.78 +0.1 801,196 - CA264_03435 0.78 -0.3 801,196 - CA264_03435 0.78 -1.0 801,287 + +1.2 801,288 - -0.1 801,401 + +1.2 801,427 + +1.2 801,428 - +0.9 801,428 - +0.5 801,428 - +0.2 801,429 + +0.9 801,430 - -0.2 801,430 - +0.6 801,430 - +0.3 801,475 - +0.2 801,489 + +1.4 801,489 + -0.1 801,490 - +0.2 801,490 - +0.1 801,490 - +1.3 801,490 - +0.9 801,498 - -2.0 801,547 + +0.4 801,549 + +0.3 801,553 + +2.9 801,554 - +0.3 801,554 - -0.2 801,567 + +1.7 801,604 + +0.2 801,604 + +1.0 801,604 + -0.8 801,604 + +0.5 801,666 + CA264_03440 0.18 +1.3 801,667 - CA264_03440 0.18 -0.1 801,775 - CA264_03440 0.45 +1.4 801,907 + CA264_03440 0.78 +1.2 801,908 - CA264_03440 0.78 -0.5 801,925 + CA264_03440 0.83 +1.1 801,926 - CA264_03440 0.83 +0.4 801,926 - CA264_03440 0.83 -0.1 801,984 + +0.7 802,004 + +1.2 802,010 + +1.3 802,011 - +0.2 802,011 - +0.2 802,011 - +0.5 802,013 + +0.7 802,014 - +0.9 802,074 - -0.9 802,077 + +1.7 802,077 + +1.4 802,077 + +1.9 802,077 + +2.0 802,077 + +1.9 802,078 - +1.1 802,078 - +0.8 802,078 - +0.5 802,110 + +0.5 802,111 - +0.8 802,111 - +1.2 802,117 - -0.0 802,117 - +1.4 802,217 - +1.5 802,229 + +2.2 802,230 - +1.1 802,231 + +2.1 802,231 + +1.7 802,231 + +1.8 802,232 - +1.6 802,238 + +0.7 802,238 + +2.2 802,324 + +2.5 802,324 + +2.1 802,325 - +1.2 802,334 + +1.5 802,335 - +1.7
Or see this region's nucleotide sequence