Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_03165 and CA264_03170 are separated by 596 nucleotides CA264_03170 and CA264_03175 are separated by 189 nucleotides
CA264_03165: CA264_03165 - acyl-CoA desaturase, at 739,213 to 740,283
_03165
CA264_03170: CA264_03170 - hypothetical protein, at 740,880 to 741,110
_03170
CA264_03175: CA264_03175 - acriflavin resistance protein, at 741,300 to 744,485
_03175
Position (kb) 740
741
742 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 739.929 kb on - strand, within CA264_03165 at 739.948 kb on - strand, within CA264_03165 at 740.007 kb on + strand, within CA264_03165 at 740.215 kb on - strand at 740.296 kb on + strand at 740.296 kb on + strand at 740.335 kb on + strand at 740.342 kb on + strand at 740.343 kb on - strand at 740.423 kb on + strand at 740.424 kb on - strand at 740.456 kb on - strand at 740.518 kb on + strand at 740.518 kb on + strand at 740.519 kb on - strand at 740.519 kb on - strand at 740.520 kb on + strand at 740.523 kb on + strand at 740.535 kb on - strand at 740.541 kb on + strand at 740.698 kb on - strand at 740.710 kb on - strand at 740.898 kb on - strand at 740.939 kb on - strand, within CA264_03170 at 740.971 kb on + strand, within CA264_03170 at 741.066 kb on + strand, within CA264_03170 at 741.119 kb on + strand at 741.119 kb on + strand at 741.120 kb on - strand at 741.120 kb on - strand at 741.122 kb on + strand at 741.122 kb on + strand at 741.122 kb on + strand at 741.129 kb on + strand at 741.129 kb on + strand at 741.130 kb on - strand at 741.131 kb on + strand at 741.134 kb on + strand at 741.134 kb on + strand at 741.135 kb on - strand at 741.135 kb on - strand at 741.154 kb on - strand at 741.154 kb on - strand at 741.161 kb on + strand at 741.172 kb on + strand at 741.172 kb on + strand at 741.190 kb on + strand at 741.225 kb on - strand at 741.270 kb on + strand at 741.274 kb on + strand at 741.301 kb on + strand at 741.302 kb on - strand at 741.302 kb on - strand at 741.304 kb on + strand at 741.304 kb on + strand at 741.304 kb on + strand at 741.358 kb on - strand at 741.358 kb on - strand at 741.358 kb on - strand at 741.368 kb on + strand at 741.387 kb on + strand at 741.387 kb on + strand at 741.440 kb on - strand at 741.442 kb on + strand at 741.442 kb on + strand at 741.609 kb on + strand at 741.616 kb on - strand at 741.671 kb on + strand, within CA264_03175 at 741.679 kb on - strand, within CA264_03175 at 741.725 kb on + strand, within CA264_03175 at 741.725 kb on + strand, within CA264_03175 at 741.733 kb on - strand, within CA264_03175 at 741.733 kb on - strand, within CA264_03175 at 741.826 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.832 kb on + strand, within CA264_03175 at 741.833 kb on + strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.833 kb on - strand, within CA264_03175 at 741.836 kb on + strand, within CA264_03175 at 741.837 kb on - strand, within CA264_03175 at 741.837 kb on - strand, within CA264_03175 at 741.842 kb on - strand, within CA264_03175 at 741.903 kb on - strand, within CA264_03175 at 741.940 kb on + strand, within CA264_03175 at 741.940 kb on + strand, within CA264_03175 at 741.948 kb on - strand, within CA264_03175 at 741.975 kb on - strand, within CA264_03175 at 742.037 kb on + strand, within CA264_03175 at 742.076 kb on + strand, within CA264_03175 at 742.076 kb on + strand, within CA264_03175 at 742.077 kb on - strand, within CA264_03175 at 742.077 kb on - strand, within CA264_03175
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 739,929 - CA264_03165 0.67 -0.2 739,948 - CA264_03165 0.69 +0.6 740,007 + CA264_03165 0.74 +1.0 740,215 - -1.4 740,296 + +1.2 740,296 + +1.7 740,335 + -0.1 740,342 + +0.2 740,343 - -2.8 740,423 + +0.8 740,424 - -0.1 740,456 - -1.4 740,518 + -1.4 740,518 + +0.6 740,519 - -0.2 740,519 - +0.3 740,520 + -1.4 740,523 + -0.4 740,535 - -0.0 740,541 + +0.7 740,698 - -0.3 740,710 - +1.0 740,898 - +0.6 740,939 - CA264_03170 0.26 -1.1 740,971 + CA264_03170 0.39 +0.3 741,066 + CA264_03170 0.81 -0.7 741,119 + +0.2 741,119 + -1.1 741,120 - +2.9 741,120 - -2.3 741,122 + -0.3 741,122 + -0.9 741,122 + -0.1 741,129 + +1.0 741,129 + +0.9 741,130 - +0.5 741,131 + +0.1 741,134 + -0.4 741,134 + -0.1 741,135 - +1.2 741,135 - +1.5 741,154 - -0.7 741,154 - -1.1 741,161 + +0.5 741,172 + +0.2 741,172 + -0.7 741,190 + -0.2 741,225 - -0.6 741,270 + -2.5 741,274 + +0.5 741,301 + +0.9 741,302 - +0.2 741,302 - -1.4 741,304 + -0.2 741,304 + -0.0 741,304 + +0.8 741,358 - +0.6 741,358 - +1.2 741,358 - +0.1 741,368 + -0.7 741,387 + +0.0 741,387 + +0.2 741,440 - -1.7 741,442 + -0.2 741,442 + -1.3 741,609 + -0.1 741,616 - +0.8 741,671 + CA264_03175 0.12 +0.5 741,679 - CA264_03175 0.12 -2.3 741,725 + CA264_03175 0.13 +1.2 741,725 + CA264_03175 0.13 -0.7 741,733 - CA264_03175 0.14 -1.7 741,733 - CA264_03175 0.14 -0.1 741,826 + CA264_03175 0.17 +0.4 741,832 + CA264_03175 0.17 +0.6 741,832 + CA264_03175 0.17 +0.2 741,832 + CA264_03175 0.17 +0.6 741,832 + CA264_03175 0.17 +0.3 741,832 + CA264_03175 0.17 -1.2 741,832 + CA264_03175 0.17 -0.7 741,832 + CA264_03175 0.17 +0.1 741,833 + CA264_03175 0.17 +0.2 741,833 - CA264_03175 0.17 +0.1 741,833 - CA264_03175 0.17 +0.9 741,833 - CA264_03175 0.17 -0.7 741,833 - CA264_03175 0.17 +0.7 741,833 - CA264_03175 0.17 +1.3 741,836 + CA264_03175 0.17 +0.0 741,837 - CA264_03175 0.17 -0.7 741,837 - CA264_03175 0.17 +0.1 741,842 - CA264_03175 0.17 +0.7 741,903 - CA264_03175 0.19 +1.9 741,940 + CA264_03175 0.20 -0.9 741,940 + CA264_03175 0.20 -0.1 741,948 - CA264_03175 0.20 +1.0 741,975 - CA264_03175 0.21 +0.6 742,037 + CA264_03175 0.23 -1.4 742,076 + CA264_03175 0.24 +0.1 742,076 + CA264_03175 0.24 -0.0 742,077 - CA264_03175 0.24 +0.1 742,077 - CA264_03175 0.24 +0.9
Or see this region's nucleotide sequence