Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02710 and CA264_02715 are separated by 17 nucleotides CA264_02715 and CA264_02720 are separated by 153 nucleotides CA264_02720 and CA264_02725 are separated by 61 nucleotides CA264_02725 and CA264_02730 are separated by 39 nucleotides
CA264_02710: CA264_02710 - hypothetical protein, at 625,227 to 626,603
_02710
CA264_02715: CA264_02715 - UDP-glucose--dolichyl-phosphate glucosyltransferase, at 626,621 to 627,313
_02715
CA264_02720: CA264_02720 - peroxiredoxin, at 627,467 to 627,955
_02720
CA264_02725: CA264_02725 - hypothetical protein, at 628,017 to 628,595
_02725
CA264_02730: CA264_02730 - hypothetical protein, at 628,635 to 629,600
_02730
Position (kb) 627
628 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 626.497 kb on + strand at 626.512 kb on + strand at 626.513 kb on - strand at 626.542 kb on + strand at 626.628 kb on + strand at 626.632 kb on + strand at 626.632 kb on + strand at 626.632 kb on + strand at 626.633 kb on - strand at 626.633 kb on - strand at 626.636 kb on + strand at 626.637 kb on - strand at 626.637 kb on - strand at 626.654 kb on - strand at 626.655 kb on + strand at 626.678 kb on + strand at 626.874 kb on + strand, within CA264_02715 at 626.874 kb on + strand, within CA264_02715 at 626.875 kb on - strand, within CA264_02715 at 626.969 kb on + strand, within CA264_02715 at 627.014 kb on + strand, within CA264_02715 at 627.100 kb on - strand, within CA264_02715 at 627.210 kb on - strand, within CA264_02715 at 627.283 kb on - strand at 627.302 kb on + strand at 627.313 kb on + strand at 627.314 kb on - strand at 627.323 kb on - strand at 627.341 kb on + strand at 627.364 kb on - strand at 627.403 kb on - strand at 627.420 kb on + strand at 627.440 kb on + strand at 627.449 kb on + strand at 627.581 kb on + strand, within CA264_02720 at 627.587 kb on + strand, within CA264_02720 at 627.592 kb on + strand, within CA264_02720 at 627.593 kb on - strand, within CA264_02720 at 627.644 kb on + strand, within CA264_02720 at 627.679 kb on - strand, within CA264_02720 at 627.679 kb on - strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.728 kb on + strand, within CA264_02720 at 627.751 kb on + strand, within CA264_02720 at 627.758 kb on - strand, within CA264_02720 at 627.793 kb on + strand, within CA264_02720 at 627.827 kb on + strand, within CA264_02720 at 627.827 kb on + strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.828 kb on - strand, within CA264_02720 at 627.832 kb on + strand, within CA264_02720 at 627.832 kb on + strand, within CA264_02720 at 627.833 kb on - strand, within CA264_02720 at 627.858 kb on - strand, within CA264_02720 at 627.858 kb on - strand, within CA264_02720 at 627.865 kb on + strand, within CA264_02720 at 627.894 kb on + strand, within CA264_02720 at 627.895 kb on - strand, within CA264_02720 at 627.951 kb on + strand at 627.959 kb on - strand at 627.996 kb on + strand at 627.997 kb on - strand at 628.067 kb on - strand at 628.067 kb on - strand at 628.089 kb on - strand, within CA264_02725 at 628.089 kb on - strand, within CA264_02725 at 628.104 kb on + strand, within CA264_02725 at 628.105 kb on - strand, within CA264_02725 at 628.105 kb on - strand, within CA264_02725 at 628.142 kb on - strand, within CA264_02725 at 628.142 kb on - strand, within CA264_02725 at 628.153 kb on + strand, within CA264_02725 at 628.153 kb on + strand, within CA264_02725 at 628.154 kb on - strand, within CA264_02725 at 628.200 kb on + strand, within CA264_02725 at 628.201 kb on - strand, within CA264_02725 at 628.330 kb on - strand, within CA264_02725 at 628.400 kb on - strand, within CA264_02725 at 628.418 kb on - strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.457 kb on + strand, within CA264_02725 at 628.458 kb on - strand, within CA264_02725 at 628.500 kb on - strand, within CA264_02725 at 628.500 kb on - strand, within CA264_02725 at 628.573 kb on - strand at 628.580 kb on + strand at 628.581 kb on - strand at 628.581 kb on - strand at 628.581 kb on - strand at 628.611 kb on + strand at 628.611 kb on + strand at 628.612 kb on - strand at 628.614 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.619 kb on + strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.620 kb on - strand at 628.621 kb on + strand at 628.656 kb on + strand at 628.656 kb on + strand at 628.778 kb on - strand, within CA264_02730 at 628.778 kb on - strand, within CA264_02730 at 628.810 kb on - strand, within CA264_02730 at 628.945 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.951 kb on + strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730 at 628.952 kb on - strand, within CA264_02730
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 626,497 + +1.9 626,512 + +1.9 626,513 - +0.3 626,542 + -0.3 626,628 + +0.3 626,632 + +1.3 626,632 + +0.6 626,632 + +0.7 626,633 - -0.5 626,633 - +0.3 626,636 + +1.7 626,637 - +0.9 626,637 - +2.5 626,654 - +1.4 626,655 + +0.6 626,678 + +1.5 626,874 + CA264_02715 0.37 +1.5 626,874 + CA264_02715 0.37 +0.1 626,875 - CA264_02715 0.37 +0.8 626,969 + CA264_02715 0.50 +0.5 627,014 + CA264_02715 0.57 +1.4 627,100 - CA264_02715 0.69 +1.4 627,210 - CA264_02715 0.85 +1.0 627,283 - +0.5 627,302 + -0.1 627,313 + +1.5 627,314 - +1.4 627,323 - +0.9 627,341 + +0.4 627,364 - +0.3 627,403 - +0.7 627,420 + +0.2 627,440 + +0.9 627,449 + +0.2 627,581 + CA264_02720 0.23 +1.0 627,587 + CA264_02720 0.25 +0.9 627,592 + CA264_02720 0.26 -0.0 627,593 - CA264_02720 0.26 +0.2 627,644 + CA264_02720 0.36 -2.2 627,679 - CA264_02720 0.43 -0.4 627,679 - CA264_02720 0.43 +0.3 627,728 + CA264_02720 0.53 -0.1 627,728 + CA264_02720 0.53 +0.4 627,728 + CA264_02720 0.53 -0.5 627,751 + CA264_02720 0.58 -0.6 627,758 - CA264_02720 0.60 -0.1 627,793 + CA264_02720 0.67 -0.5 627,827 + CA264_02720 0.74 -0.5 627,827 + CA264_02720 0.74 +0.5 627,828 - CA264_02720 0.74 +0.3 627,828 - CA264_02720 0.74 +0.5 627,828 - CA264_02720 0.74 -0.5 627,832 + CA264_02720 0.75 -1.5 627,832 + CA264_02720 0.75 -0.4 627,833 - CA264_02720 0.75 -0.4 627,858 - CA264_02720 0.80 -0.4 627,858 - CA264_02720 0.80 -0.7 627,865 + CA264_02720 0.81 -0.8 627,894 + CA264_02720 0.87 +0.6 627,895 - CA264_02720 0.88 +2.3 627,951 + +0.2 627,959 - +0.2 627,996 + +0.3 627,997 - -0.4 628,067 - -0.5 628,067 - -0.3 628,089 - CA264_02725 0.12 -2.1 628,089 - CA264_02725 0.12 +0.1 628,104 + CA264_02725 0.15 -0.0 628,105 - CA264_02725 0.15 -0.1 628,105 - CA264_02725 0.15 +0.9 628,142 - CA264_02725 0.22 +0.6 628,142 - CA264_02725 0.22 -0.8 628,153 + CA264_02725 0.23 -0.6 628,153 + CA264_02725 0.23 +1.6 628,154 - CA264_02725 0.24 +0.9 628,200 + CA264_02725 0.32 -0.1 628,201 - CA264_02725 0.32 +0.6 628,330 - CA264_02725 0.54 -0.3 628,400 - CA264_02725 0.66 -0.0 628,418 - CA264_02725 0.69 -0.1 628,457 + CA264_02725 0.76 -0.6 628,457 + CA264_02725 0.76 -0.4 628,457 + CA264_02725 0.76 -1.5 628,458 - CA264_02725 0.76 +0.8 628,500 - CA264_02725 0.83 -0.1 628,500 - CA264_02725 0.83 -0.3 628,573 - +0.0 628,580 + -0.7 628,581 - +0.3 628,581 - +0.0 628,581 - +0.1 628,611 + -0.9 628,611 + +0.1 628,612 - -0.5 628,614 + +0.7 628,619 + +1.5 628,619 + +0.3 628,619 + -0.1 628,619 + +2.5 628,619 + +0.6 628,620 - -1.2 628,620 - +0.5 628,620 - -1.2 628,620 - +1.1 628,620 - +0.0 628,620 - +0.2 628,621 + +0.3 628,656 + -2.8 628,656 + -0.6 628,778 - CA264_02730 0.15 +0.0 628,778 - CA264_02730 0.15 +0.6 628,810 - CA264_02730 0.18 -0.0 628,945 + CA264_02730 0.32 +0.5 628,951 + CA264_02730 0.33 +1.2 628,951 + CA264_02730 0.33 +0.2 628,951 + CA264_02730 0.33 -0.1 628,952 - CA264_02730 0.33 +0.4 628,952 - CA264_02730 0.33 -0.6 628,952 - CA264_02730 0.33 -0.3 628,952 - CA264_02730 0.33 +0.6
Or see this region's nucleotide sequence