Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02405 and CA264_02410 are separated by 120 nucleotides CA264_02410 and CA264_02415 are separated by 151 nucleotides CA264_02415 and CA264_02420 overlap by 4 nucleotides
CA264_02405: CA264_02405 - beta-ketoacyl-ACP reductase, at 560,145 to 561,341
_02405
CA264_02410: CA264_02410 - adenosylmethionine--8-amino-7-oxononanoate transaminase, at 561,462 to 562,778
_02410
CA264_02415: CA264_02415 - dethiobiotin synthase, at 562,930 to 563,544
_02415
CA264_02420: CA264_02420 - 8-amino-7-oxononanoate synthase, at 563,541 to 564,671
_02420
Position (kb) 561
562
563 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 560.646 kb on + strand, within CA264_02405 at 560.646 kb on + strand, within CA264_02405 at 560.651 kb on + strand, within CA264_02405 at 560.652 kb on - strand, within CA264_02405 at 560.652 kb on - strand, within CA264_02405 at 560.693 kb on - strand, within CA264_02405 at 560.716 kb on + strand, within CA264_02405 at 560.855 kb on + strand, within CA264_02405 at 560.914 kb on - strand, within CA264_02405 at 560.957 kb on + strand, within CA264_02405 at 560.958 kb on - strand, within CA264_02405 at 560.977 kb on + strand, within CA264_02405 at 560.977 kb on + strand, within CA264_02405 at 560.978 kb on - strand, within CA264_02405 at 561.018 kb on + strand, within CA264_02405 at 561.019 kb on - strand, within CA264_02405 at 561.019 kb on - strand, within CA264_02405 at 561.162 kb on + strand, within CA264_02405 at 561.163 kb on - strand, within CA264_02405 at 561.321 kb on - strand at 561.357 kb on - strand at 561.363 kb on + strand at 561.364 kb on - strand at 561.364 kb on - strand at 561.364 kb on - strand at 561.430 kb on + strand at 561.432 kb on + strand at 561.433 kb on - strand at 561.433 kb on - strand at 561.437 kb on + strand at 561.437 kb on + strand at 561.438 kb on - strand at 561.545 kb on - strand at 561.545 kb on - strand at 561.577 kb on + strand at 561.587 kb on + strand at 561.588 kb on - strand at 561.593 kb on - strand at 561.593 kb on - strand at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.596 kb on + strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.597 kb on - strand, within CA264_02410 at 561.674 kb on - strand, within CA264_02410 at 561.711 kb on - strand, within CA264_02410 at 561.756 kb on - strand, within CA264_02410 at 561.795 kb on + strand, within CA264_02410 at 561.797 kb on + strand, within CA264_02410 at 561.798 kb on - strand, within CA264_02410 at 561.798 kb on - strand, within CA264_02410 at 561.866 kb on + strand, within CA264_02410 at 561.875 kb on - strand, within CA264_02410 at 562.139 kb on - strand, within CA264_02410 at 562.182 kb on - strand, within CA264_02410 at 562.228 kb on - strand, within CA264_02410 at 562.285 kb on + strand, within CA264_02410 at 562.355 kb on - strand, within CA264_02410 at 562.491 kb on + strand, within CA264_02410 at 562.535 kb on + strand, within CA264_02410 at 562.535 kb on + strand, within CA264_02410 at 562.569 kb on + strand, within CA264_02410 at 562.570 kb on - strand, within CA264_02410 at 562.597 kb on + strand, within CA264_02410 at 562.597 kb on + strand, within CA264_02410 at 562.624 kb on - strand, within CA264_02410 at 562.733 kb on + strand at 562.735 kb on + strand at 562.749 kb on - strand at 562.795 kb on + strand at 562.828 kb on - strand at 562.837 kb on + strand at 562.838 kb on - strand at 562.838 kb on - strand at 562.869 kb on - strand at 562.885 kb on + strand at 562.885 kb on + strand at 562.889 kb on + strand at 562.889 kb on + strand at 562.890 kb on - strand at 562.890 kb on - strand at 562.916 kb on + strand at 562.932 kb on - strand at 562.937 kb on + strand at 562.937 kb on + strand at 562.937 kb on + strand at 562.944 kb on + strand at 563.151 kb on - strand, within CA264_02415 at 563.357 kb on + strand, within CA264_02415 at 563.358 kb on - strand, within CA264_02415 at 563.482 kb on + strand, within CA264_02415 at 563.483 kb on - strand at 563.483 kb on - strand at 563.527 kb on + strand at 563.546 kb on + strand at 563.591 kb on + strand at 563.648 kb on + strand at 563.736 kb on + strand, within CA264_02420
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 560,646 + CA264_02405 0.42 -0.5 560,646 + CA264_02405 0.42 +0.2 560,651 + CA264_02405 0.42 -1.1 560,652 - CA264_02405 0.42 +0.2 560,652 - CA264_02405 0.42 +1.4 560,693 - CA264_02405 0.46 +0.8 560,716 + CA264_02405 0.48 +0.2 560,855 + CA264_02405 0.59 +1.8 560,914 - CA264_02405 0.64 -1.1 560,957 + CA264_02405 0.68 +0.2 560,958 - CA264_02405 0.68 +0.2 560,977 + CA264_02405 0.70 -0.2 560,977 + CA264_02405 0.70 -0.5 560,978 - CA264_02405 0.70 +0.4 561,018 + CA264_02405 0.73 -0.3 561,019 - CA264_02405 0.73 -1.1 561,019 - CA264_02405 0.73 -1.4 561,162 + CA264_02405 0.85 -2.0 561,163 - CA264_02405 0.85 -0.3 561,321 - +0.8 561,357 - +0.1 561,363 + -0.2 561,364 - -0.4 561,364 - +0.8 561,364 - +0.8 561,430 + -0.8 561,432 + -2.0 561,433 - +0.3 561,433 - +1.3 561,437 + +0.3 561,437 + -0.2 561,438 - +0.1 561,545 - -0.3 561,545 - +0.1 561,577 + -0.7 561,587 + -0.2 561,588 - +0.2 561,593 - +1.6 561,593 - -0.1 561,596 + CA264_02410 0.10 -0.8 561,596 + CA264_02410 0.10 -0.2 561,596 + CA264_02410 0.10 -1.0 561,596 + CA264_02410 0.10 +0.8 561,596 + CA264_02410 0.10 +0.3 561,597 - CA264_02410 0.10 -1.2 561,597 - CA264_02410 0.10 +1.3 561,597 - CA264_02410 0.10 -0.0 561,597 - CA264_02410 0.10 +0.2 561,597 - CA264_02410 0.10 -0.2 561,597 - CA264_02410 0.10 +0.5 561,674 - CA264_02410 0.16 -0.3 561,711 - CA264_02410 0.19 -1.0 561,756 - CA264_02410 0.22 +0.6 561,795 + CA264_02410 0.25 +0.4 561,797 + CA264_02410 0.25 -0.3 561,798 - CA264_02410 0.26 +0.8 561,798 - CA264_02410 0.26 +0.0 561,866 + CA264_02410 0.31 -0.8 561,875 - CA264_02410 0.31 -1.2 562,139 - CA264_02410 0.51 +0.1 562,182 - CA264_02410 0.55 -1.2 562,228 - CA264_02410 0.58 -0.2 562,285 + CA264_02410 0.62 -1.4 562,355 - CA264_02410 0.68 +0.1 562,491 + CA264_02410 0.78 -0.5 562,535 + CA264_02410 0.81 -0.2 562,535 + CA264_02410 0.81 +0.2 562,569 + CA264_02410 0.84 -0.2 562,570 - CA264_02410 0.84 +2.6 562,597 + CA264_02410 0.86 -1.8 562,597 + CA264_02410 0.86 -0.7 562,624 - CA264_02410 0.88 -1.2 562,733 + -0.5 562,735 + -0.7 562,749 - +0.7 562,795 + +0.1 562,828 - -0.5 562,837 + -1.1 562,838 - +0.8 562,838 - +0.5 562,869 - -0.7 562,885 + -0.2 562,885 + +0.3 562,889 + -1.7 562,889 + +0.8 562,890 - +0.4 562,890 - +0.0 562,916 + -0.3 562,932 - -0.2 562,937 + -1.7 562,937 + -2.0 562,937 + +1.8 562,944 + -2.7 563,151 - CA264_02415 0.36 -1.0 563,357 + CA264_02415 0.69 -0.2 563,358 - CA264_02415 0.70 -3.3 563,482 + CA264_02415 0.90 -2.7 563,483 - -1.2 563,483 - -2.0 563,527 + -1.0 563,546 + -2.3 563,591 + +0.6 563,648 + +1.3 563,736 + CA264_02420 0.17 -1.5
Or see this region's nucleotide sequence