Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_02255 and CA264_02260 are separated by 45 nucleotides CA264_02260 and CA264_02265 overlap by 20 nucleotides CA264_02265 and CA264_02270 are separated by 79 nucleotides
CA264_02255: CA264_02255 - hypothetical protein, at 522,173 to 522,916
_02255
CA264_02260: CA264_02260 - hypothetical protein, at 522,962 to 525,358
_02260
CA264_02265: CA264_02265 - phosphonate ABC transporter ATP-binding protein, at 525,339 to 526,058
_02265
CA264_02270: CA264_02270 - efflux transporter periplasmic adaptor subunit, at 526,138 to 527,388
_02270
Position (kb)
522
523
524
525
526 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 521.985 kb on - strand at 521.985 kb on - strand at 522.055 kb on - strand at 522.107 kb on - strand at 522.126 kb on + strand at 522.134 kb on + strand at 522.264 kb on + strand, within CA264_02255 at 522.267 kb on + strand, within CA264_02255 at 522.267 kb on + strand, within CA264_02255 at 522.268 kb on - strand, within CA264_02255 at 522.359 kb on + strand, within CA264_02255 at 522.475 kb on + strand, within CA264_02255 at 522.512 kb on + strand, within CA264_02255 at 522.512 kb on + strand, within CA264_02255 at 522.548 kb on + strand, within CA264_02255 at 522.549 kb on - strand, within CA264_02255 at 522.549 kb on - strand, within CA264_02255 at 522.622 kb on + strand, within CA264_02255 at 522.671 kb on + strand, within CA264_02255 at 522.671 kb on + strand, within CA264_02255 at 522.672 kb on - strand, within CA264_02255 at 522.906 kb on - strand at 523.038 kb on - strand at 523.089 kb on - strand at 523.089 kb on - strand at 523.196 kb on + strand at 523.196 kb on + strand at 523.197 kb on - strand at 523.204 kb on + strand, within CA264_02260 at 523.204 kb on + strand, within CA264_02260 at 523.308 kb on - strand, within CA264_02260 at 523.395 kb on + strand, within CA264_02260 at 523.704 kb on + strand, within CA264_02260 at 523.704 kb on + strand, within CA264_02260 at 523.813 kb on + strand, within CA264_02260 at 523.954 kb on + strand, within CA264_02260 at 523.969 kb on + strand, within CA264_02260 at 524.057 kb on + strand, within CA264_02260 at 524.057 kb on + strand, within CA264_02260 at 524.058 kb on - strand, within CA264_02260 at 524.099 kb on - strand, within CA264_02260 at 524.355 kb on - strand, within CA264_02260 at 524.443 kb on - strand, within CA264_02260 at 524.446 kb on + strand, within CA264_02260 at 524.446 kb on + strand, within CA264_02260 at 524.446 kb on + strand, within CA264_02260 at 524.447 kb on - strand, within CA264_02260 at 524.499 kb on + strand, within CA264_02260 at 524.499 kb on + strand, within CA264_02260 at 524.500 kb on - strand, within CA264_02260 at 524.500 kb on - strand, within CA264_02260 at 524.500 kb on - strand, within CA264_02260 at 524.524 kb on + strand, within CA264_02260 at 524.524 kb on + strand, within CA264_02260 at 524.525 kb on - strand, within CA264_02260 at 524.650 kb on + strand, within CA264_02260 at 524.695 kb on - strand, within CA264_02260 at 524.695 kb on - strand, within CA264_02260 at 524.695 kb on - strand, within CA264_02260 at 524.695 kb on - strand, within CA264_02260 at 524.701 kb on - strand, within CA264_02260 at 524.923 kb on + strand, within CA264_02260 at 525.107 kb on - strand, within CA264_02260 at 525.167 kb on - strand at 525.167 kb on - strand at 525.205 kb on + strand at 525.240 kb on + strand at 525.240 kb on + strand at 525.240 kb on + strand at 525.241 kb on - strand at 525.241 kb on - strand at 525.241 kb on - strand at 525.241 kb on - strand at 525.246 kb on + strand at 525.246 kb on + strand at 525.247 kb on - strand at 525.247 kb on - strand at 525.248 kb on + strand at 525.248 kb on + strand at 525.248 kb on + strand at 525.248 kb on + strand at 525.248 kb on + strand at 525.249 kb on - strand at 525.251 kb on - strand at 525.303 kb on + strand at 525.305 kb on + strand at 525.305 kb on + strand at 525.306 kb on - strand at 525.306 kb on - strand at 525.306 kb on - strand at 525.306 kb on - strand at 525.340 kb on + strand at 525.345 kb on + strand at 525.553 kb on - strand, within CA264_02265 at 525.554 kb on + strand, within CA264_02265 at 525.703 kb on + strand, within CA264_02265 at 525.747 kb on + strand, within CA264_02265 at 525.764 kb on + strand, within CA264_02265 at 525.905 kb on + strand, within CA264_02265 at 525.957 kb on + strand, within CA264_02265 at 525.958 kb on - strand, within CA264_02265 at 526.010 kb on - strand at 526.039 kb on - strand at 526.042 kb on - strand at 526.071 kb on - strand at 526.077 kb on - strand at 526.095 kb on + strand at 526.105 kb on + strand at 526.105 kb on + strand at 526.106 kb on - strand at 526.140 kb on - strand at 526.192 kb on + strand at 526.192 kb on + strand at 526.233 kb on - strand at 526.329 kb on - strand, within CA264_02270 at 526.329 kb on - strand, within CA264_02270
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 521,985 - +2.0 521,985 - +1.8 522,055 - +1.2 522,107 - +0.4 522,126 + +0.9 522,134 + +2.0 522,264 + CA264_02255 0.12 +0.7 522,267 + CA264_02255 0.13 +1.1 522,267 + CA264_02255 0.13 -0.7 522,268 - CA264_02255 0.13 +0.8 522,359 + CA264_02255 0.25 +0.8 522,475 + CA264_02255 0.41 +1.1 522,512 + CA264_02255 0.46 +1.3 522,512 + CA264_02255 0.46 +1.4 522,548 + CA264_02255 0.50 -0.1 522,549 - CA264_02255 0.51 +0.8 522,549 - CA264_02255 0.51 +1.7 522,622 + CA264_02255 0.60 +1.0 522,671 + CA264_02255 0.67 +0.8 522,671 + CA264_02255 0.67 +1.8 522,672 - CA264_02255 0.67 +1.5 522,906 - +1.2 523,038 - +1.3 523,089 - +1.3 523,089 - -0.7 523,196 + +0.4 523,196 + +0.4 523,197 - +2.3 523,204 + CA264_02260 0.10 +1.0 523,204 + CA264_02260 0.10 -2.3 523,308 - CA264_02260 0.14 +2.4 523,395 + CA264_02260 0.18 -2.2 523,704 + CA264_02260 0.31 +0.7 523,704 + CA264_02260 0.31 -1.5 523,813 + CA264_02260 0.36 +0.8 523,954 + CA264_02260 0.41 +0.4 523,969 + CA264_02260 0.42 +0.9 524,057 + CA264_02260 0.46 +0.9 524,057 + CA264_02260 0.46 +1.4 524,058 - CA264_02260 0.46 +1.7 524,099 - CA264_02260 0.47 +0.6 524,355 - CA264_02260 0.58 -0.8 524,443 - CA264_02260 0.62 +0.5 524,446 + CA264_02260 0.62 +1.0 524,446 + CA264_02260 0.62 +0.4 524,446 + CA264_02260 0.62 +0.8 524,447 - CA264_02260 0.62 +1.4 524,499 + CA264_02260 0.64 -1.4 524,499 + CA264_02260 0.64 -0.8 524,500 - CA264_02260 0.64 +1.4 524,500 - CA264_02260 0.64 +1.9 524,500 - CA264_02260 0.64 +0.4 524,524 + CA264_02260 0.65 +0.8 524,524 + CA264_02260 0.65 +0.7 524,525 - CA264_02260 0.65 +2.6 524,650 + CA264_02260 0.70 +0.4 524,695 - CA264_02260 0.72 +1.0 524,695 - CA264_02260 0.72 -0.3 524,695 - CA264_02260 0.72 +0.6 524,695 - CA264_02260 0.72 +0.7 524,701 - CA264_02260 0.73 +0.3 524,923 + CA264_02260 0.82 +0.5 525,107 - CA264_02260 0.89 +1.4 525,167 - +0.5 525,167 - +0.0 525,205 + -0.2 525,240 + -0.2 525,240 + -1.2 525,240 + -0.5 525,241 - +0.1 525,241 - +0.4 525,241 - +0.2 525,241 - -0.2 525,246 + +0.6 525,246 + +1.1 525,247 - +0.8 525,247 - -0.5 525,248 + +0.8 525,248 + +1.8 525,248 + -0.2 525,248 + +0.4 525,248 + -0.2 525,249 - -0.1 525,251 - +3.2 525,303 + -0.6 525,305 + -0.3 525,305 + +0.4 525,306 - +0.0 525,306 - -0.1 525,306 - -0.5 525,306 - -0.2 525,340 + +2.2 525,345 + -0.7 525,553 - CA264_02265 0.30 -0.0 525,554 + CA264_02265 0.30 +0.4 525,703 + CA264_02265 0.51 +2.1 525,747 + CA264_02265 0.57 +0.8 525,764 + CA264_02265 0.59 +2.2 525,905 + CA264_02265 0.79 -0.8 525,957 + CA264_02265 0.86 +0.1 525,958 - CA264_02265 0.86 +0.4 526,010 - +0.6 526,039 - +1.0 526,042 - +1.1 526,071 - +1.9 526,077 - +0.7 526,095 + +1.5 526,105 + +0.6 526,105 + +0.7 526,106 - +0.9 526,140 - +0.3 526,192 + +0.5 526,192 + +1.1 526,233 - +0.9 526,329 - CA264_02270 0.15 -0.4 526,329 - CA264_02270 0.15 +1.1
Or see this region's nucleotide sequence