Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_01905 and CA264_01910 are separated by 227 nucleotides CA264_01910 and CA264_01915 are separated by 292 nucleotides
CA264_01905: CA264_01905 - cystathionine beta-synthase, at 443,852 to 445,696
_01905
CA264_01910: CA264_01910 - transposase, at 445,924 to 446,472
_01910
CA264_01915: CA264_01915 - hypothetical protein, at 446,765 to 447,676
_01915
Position (kb) 445
446
447 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 445.027 kb on + strand, within CA264_01905 at 445.030 kb on - strand, within CA264_01905 at 445.274 kb on - strand, within CA264_01905 at 445.298 kb on + strand, within CA264_01905 at 445.457 kb on + strand, within CA264_01905 at 445.524 kb on - strand at 445.567 kb on - strand at 445.695 kb on - strand at 445.710 kb on - strand at 445.715 kb on - strand at 445.731 kb on + strand at 445.732 kb on - strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.735 kb on + strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.736 kb on - strand at 445.760 kb on + strand at 445.761 kb on - strand at 445.761 kb on - strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.769 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.803 kb on + strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.804 kb on - strand at 445.853 kb on - strand at 445.863 kb on + strand at 445.901 kb on - strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.910 kb on + strand at 445.911 kb on - strand at 445.939 kb on - strand at 445.941 kb on + strand at 445.942 kb on - strand at 445.967 kb on + strand at 445.985 kb on + strand, within CA264_01910 at 445.985 kb on + strand, within CA264_01910 at 445.986 kb on - strand, within CA264_01910 at 445.989 kb on + strand, within CA264_01910 at 445.990 kb on - strand, within CA264_01910 at 446.041 kb on - strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.042 kb on + strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.043 kb on - strand, within CA264_01910 at 446.077 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.227 kb on - strand, within CA264_01910 at 446.307 kb on + strand, within CA264_01910 at 446.352 kb on + strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.353 kb on - strand, within CA264_01910 at 446.378 kb on + strand, within CA264_01910 at 446.379 kb on - strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.410 kb on + strand, within CA264_01910 at 446.411 kb on - strand, within CA264_01910 at 446.432 kb on + strand at 446.435 kb on - strand at 446.460 kb on - strand at 446.472 kb on + strand at 446.473 kb on - strand at 446.479 kb on + strand at 446.479 kb on + strand at 446.480 kb on - strand at 446.480 kb on - strand at 446.482 kb on + strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.483 kb on - strand at 446.490 kb on - strand at 446.500 kb on + strand at 446.500 kb on + strand at 446.501 kb on - strand at 446.509 kb on - strand at 446.538 kb on + strand at 446.538 kb on + strand at 446.539 kb on - strand at 446.545 kb on + strand at 446.549 kb on + strand at 446.550 kb on - strand at 446.550 kb on - strand at 446.695 kb on - strand at 446.695 kb on - strand at 446.716 kb on + strand at 446.716 kb on + strand at 446.716 kb on + strand at 446.717 kb on - strand at 446.723 kb on - strand at 446.820 kb on + strand at 446.877 kb on + strand, within CA264_01915 at 446.941 kb on + strand, within CA264_01915 at 446.969 kb on + strand, within CA264_01915 at 447.052 kb on + strand, within CA264_01915 at 447.121 kb on - strand, within CA264_01915 at 447.121 kb on - strand, within CA264_01915 at 447.132 kb on - strand, within CA264_01915 at 447.153 kb on - strand, within CA264_01915 at 447.157 kb on + strand, within CA264_01915 at 447.227 kb on + strand, within CA264_01915 at 447.230 kb on - strand, within CA264_01915 at 447.238 kb on + strand, within CA264_01915 at 447.252 kb on - strand, within CA264_01915 at 447.270 kb on - strand, within CA264_01915 at 447.434 kb on + strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915 at 447.447 kb on - strand, within CA264_01915
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 445,027 + CA264_01905 0.64 +0.8 445,030 - CA264_01905 0.64 -0.2 445,274 - CA264_01905 0.77 +1.8 445,298 + CA264_01905 0.78 +2.5 445,457 + CA264_01905 0.87 +1.2 445,524 - +1.6 445,567 - -0.2 445,695 - -0.0 445,710 - -0.8 445,715 - +1.1 445,731 + +0.2 445,732 - -1.3 445,735 + +1.0 445,735 + +0.4 445,735 + +0.2 445,735 + -0.3 445,736 - +0.2 445,736 - +1.0 445,736 - +1.6 445,736 - +0.2 445,760 + +0.2 445,761 - -0.2 445,761 - -0.5 445,769 + -0.3 445,769 + -0.2 445,769 + +1.1 445,769 + -0.5 445,769 + -0.0 445,769 + +0.6 445,803 + +1.5 445,803 + +0.1 445,803 + +0.2 445,803 + -2.4 445,803 + +0.8 445,804 - -1.8 445,804 - -0.4 445,804 - -0.2 445,853 - +0.8 445,863 + -1.5 445,901 - -1.6 445,910 + -0.5 445,910 + +2.0 445,910 + -0.8 445,910 + -0.3 445,911 - -0.3 445,939 - +0.0 445,941 + +1.6 445,942 - +1.1 445,967 + +1.4 445,985 + CA264_01910 0.11 +0.2 445,985 + CA264_01910 0.11 +0.8 445,986 - CA264_01910 0.11 +0.8 445,989 + CA264_01910 0.12 -1.8 445,990 - CA264_01910 0.12 +0.2 446,041 - CA264_01910 0.21 -0.2 446,042 + CA264_01910 0.21 -0.3 446,042 + CA264_01910 0.21 +0.6 446,043 - CA264_01910 0.22 +0.0 446,043 - CA264_01910 0.22 -1.0 446,043 - CA264_01910 0.22 -1.2 446,077 - CA264_01910 0.28 -0.5 446,227 - CA264_01910 0.55 -0.5 446,227 - CA264_01910 0.55 -0.4 446,307 + CA264_01910 0.70 +0.4 446,352 + CA264_01910 0.78 -2.2 446,353 - CA264_01910 0.78 -1.5 446,353 - CA264_01910 0.78 -0.2 446,378 + CA264_01910 0.83 +0.1 446,379 - CA264_01910 0.83 +0.4 446,410 + CA264_01910 0.89 -0.3 446,410 + CA264_01910 0.89 -0.1 446,411 - CA264_01910 0.89 -0.2 446,432 + -0.8 446,435 - -0.3 446,460 - -1.2 446,472 + +0.2 446,473 - -0.9 446,479 + +0.8 446,479 + +0.1 446,480 - +0.5 446,480 - -0.3 446,482 + -0.3 446,483 - -0.6 446,483 - +2.4 446,483 - +0.7 446,490 - -0.5 446,500 + -0.1 446,500 + -0.0 446,501 - +0.8 446,509 - +0.1 446,538 + -0.7 446,538 + -0.9 446,539 - -0.2 446,545 + +1.0 446,549 + +1.3 446,550 - +0.1 446,550 - +0.6 446,695 - -0.2 446,695 - -0.6 446,716 + -0.3 446,716 + -0.4 446,716 + -1.8 446,717 - -2.2 446,723 - +0.4 446,820 + -0.6 446,877 + CA264_01915 0.12 +1.0 446,941 + CA264_01915 0.19 +0.2 446,969 + CA264_01915 0.22 -0.9 447,052 + CA264_01915 0.31 -0.4 447,121 - CA264_01915 0.39 -0.3 447,121 - CA264_01915 0.39 -0.7 447,132 - CA264_01915 0.40 +1.0 447,153 - CA264_01915 0.43 +0.1 447,157 + CA264_01915 0.43 +0.2 447,227 + CA264_01915 0.51 -1.2 447,230 - CA264_01915 0.51 -0.3 447,238 + CA264_01915 0.52 -0.2 447,252 - CA264_01915 0.53 -1.8 447,270 - CA264_01915 0.55 -0.1 447,434 + CA264_01915 0.73 -3.0 447,447 - CA264_01915 0.75 +0.0 447,447 - CA264_01915 0.75 -1.3 447,447 - CA264_01915 0.75 +0.6
Or see this region's nucleotide sequence