Experiment: m.b. Carbenicillin 0.0015 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt CA264_00695 and CA264_00700 overlap by 1 nucleotides CA264_00700 and CA264_00705 are separated by 142 nucleotides CA264_00705 and CA264_00710 are separated by 69 nucleotides CA264_00710 and CA264_00715 are separated by 9 nucleotides
CA264_00695: CA264_00695 - cytochrome-c peroxidase, at 151,489 to 152,562
_00695
CA264_00700: CA264_00700 - hypothetical protein, at 152,562 to 153,335
_00700
CA264_00705: CA264_00705 - hypothetical protein, at 153,478 to 153,810
_00705
CA264_00710: CA264_00710 - hypothetical protein, at 153,880 to 154,635
_00710
CA264_00715: CA264_00715 - hypothetical protein, at 154,645 to 155,742
_00715
Position (kb)
153
154 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 152.503 kb on - strand at 152.542 kb on + strand at 152.543 kb on - strand at 152.563 kb on + strand at 152.592 kb on + strand at 152.603 kb on - strand at 152.604 kb on - strand at 152.611 kb on + strand at 152.612 kb on - strand at 152.669 kb on + strand, within CA264_00700 at 152.679 kb on + strand, within CA264_00700 at 152.680 kb on - strand, within CA264_00700 at 152.680 kb on - strand, within CA264_00700 at 152.680 kb on - strand, within CA264_00700 at 152.680 kb on - strand, within CA264_00700 at 152.748 kb on + strand, within CA264_00700 at 152.749 kb on - strand, within CA264_00700 at 152.805 kb on + strand, within CA264_00700 at 152.805 kb on + strand, within CA264_00700 at 152.805 kb on + strand, within CA264_00700 at 152.806 kb on - strand, within CA264_00700 at 152.806 kb on - strand, within CA264_00700 at 152.813 kb on - strand, within CA264_00700 at 152.819 kb on - strand, within CA264_00700 at 152.819 kb on - strand, within CA264_00700 at 152.819 kb on - strand, within CA264_00700 at 152.819 kb on - strand, within CA264_00700 at 152.870 kb on + strand, within CA264_00700 at 152.878 kb on + strand, within CA264_00700 at 152.940 kb on + strand, within CA264_00700 at 152.940 kb on + strand, within CA264_00700 at 153.061 kb on + strand, within CA264_00700 at 153.083 kb on - strand, within CA264_00700 at 153.105 kb on - strand, within CA264_00700 at 153.105 kb on - strand, within CA264_00700 at 153.128 kb on - strand, within CA264_00700 at 153.173 kb on - strand, within CA264_00700 at 153.173 kb on - strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.205 kb on + strand, within CA264_00700 at 153.206 kb on - strand, within CA264_00700 at 153.206 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.217 kb on - strand, within CA264_00700 at 153.218 kb on + strand, within CA264_00700 at 153.300 kb on + strand at 153.300 kb on + strand at 153.300 kb on + strand at 153.301 kb on - strand at 153.303 kb on + strand at 153.304 kb on - strand at 153.304 kb on - strand at 153.312 kb on + strand at 153.312 kb on + strand at 153.313 kb on - strand at 153.313 kb on - strand at 153.363 kb on + strand at 153.363 kb on + strand at 153.364 kb on - strand at 153.378 kb on - strand at 153.379 kb on + strand at 153.386 kb on + strand at 153.387 kb on - strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.390 kb on + strand at 153.391 kb on - strand at 153.393 kb on - strand at 153.422 kb on - strand at 153.423 kb on + strand at 153.424 kb on - strand at 153.424 kb on - strand at 153.468 kb on + strand at 153.469 kb on - strand at 153.469 kb on - strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.479 kb on + strand at 153.480 kb on - strand at 153.480 kb on - strand at 153.480 kb on - strand at 153.482 kb on - strand at 153.512 kb on + strand, within CA264_00705 at 153.513 kb on - strand, within CA264_00705 at 153.614 kb on + strand, within CA264_00705 at 153.614 kb on + strand, within CA264_00705 at 153.615 kb on - strand, within CA264_00705 at 153.752 kb on + strand, within CA264_00705 at 153.753 kb on - strand, within CA264_00705 at 153.753 kb on - strand, within CA264_00705 at 153.792 kb on + strand at 153.792 kb on + strand at 153.793 kb on - strand at 153.817 kb on + strand at 153.871 kb on + strand at 153.887 kb on - strand at 154.092 kb on - strand, within CA264_00710 at 154.149 kb on - strand, within CA264_00710 at 154.149 kb on - strand, within CA264_00710 at 154.174 kb on - strand, within CA264_00710 at 154.286 kb on + strand, within CA264_00710 at 154.314 kb on + strand, within CA264_00710 at 154.315 kb on - strand, within CA264_00710 at 154.370 kb on + strand, within CA264_00710 at 154.415 kb on + strand, within CA264_00710 at 154.416 kb on - strand, within CA264_00710 at 154.416 kb on - strand, within CA264_00710 at 154.423 kb on - strand, within CA264_00710 at 154.642 kb on + strand at 154.643 kb on - strand at 154.756 kb on - strand, within CA264_00715 at 154.780 kb on + strand, within CA264_00715 at 154.782 kb on + strand, within CA264_00715 at 154.810 kb on - strand, within CA264_00715
Per-strain Table
Position Strand Gene LocusTag Fraction m.b. Carbenicillin 0.0015 mg/ml remove 152,503 - +0.6 152,542 + -0.8 152,543 - +0.2 152,563 + -0.2 152,592 + +0.1 152,603 - +0.4 152,604 - +0.0 152,611 + -0.6 152,612 - -0.2 152,669 + CA264_00700 0.14 +0.8 152,679 + CA264_00700 0.15 +0.4 152,680 - CA264_00700 0.15 -0.1 152,680 - CA264_00700 0.15 +0.2 152,680 - CA264_00700 0.15 +0.8 152,680 - CA264_00700 0.15 -1.5 152,748 + CA264_00700 0.24 +0.4 152,749 - CA264_00700 0.24 +0.8 152,805 + CA264_00700 0.31 -0.5 152,805 + CA264_00700 0.31 -0.0 152,805 + CA264_00700 0.31 +2.2 152,806 - CA264_00700 0.32 +1.2 152,806 - CA264_00700 0.32 +0.2 152,813 - CA264_00700 0.32 +0.1 152,819 - CA264_00700 0.33 -0.7 152,819 - CA264_00700 0.33 -1.6 152,819 - CA264_00700 0.33 +0.8 152,819 - CA264_00700 0.33 +0.2 152,870 + CA264_00700 0.40 -0.7 152,878 + CA264_00700 0.41 -0.0 152,940 + CA264_00700 0.49 -0.5 152,940 + CA264_00700 0.49 -0.6 153,061 + CA264_00700 0.64 -0.5 153,083 - CA264_00700 0.67 +0.4 153,105 - CA264_00700 0.70 -0.8 153,105 - CA264_00700 0.70 +1.4 153,128 - CA264_00700 0.73 +0.5 153,173 - CA264_00700 0.79 -0.3 153,173 - CA264_00700 0.79 +0.7 153,205 + CA264_00700 0.83 -0.7 153,205 + CA264_00700 0.83 -1.5 153,205 + CA264_00700 0.83 -0.3 153,205 + CA264_00700 0.83 +0.8 153,206 - CA264_00700 0.83 +0.2 153,206 - CA264_00700 0.83 +1.7 153,217 - CA264_00700 0.85 +0.3 153,217 - CA264_00700 0.85 -0.5 153,217 - CA264_00700 0.85 +0.6 153,218 + CA264_00700 0.85 -0.0 153,300 + -0.4 153,300 + +1.6 153,300 + -0.4 153,301 - +0.8 153,303 + -0.3 153,304 - -1.3 153,304 - +1.2 153,312 + +0.3 153,312 + +0.5 153,313 - +0.3 153,313 - +0.8 153,363 + +1.4 153,363 + -0.2 153,364 - +0.1 153,378 - -0.2 153,379 + -0.1 153,386 + -0.2 153,387 - +1.1 153,390 + -1.8 153,390 + -0.8 153,390 + +0.1 153,390 + -0.5 153,391 - -0.2 153,393 - +0.1 153,422 - +0.2 153,423 + +0.1 153,424 - -0.2 153,424 - +0.1 153,468 + -0.7 153,469 - +1.4 153,469 - +0.0 153,479 + -0.1 153,479 + +1.2 153,479 + -0.3 153,479 + -0.3 153,479 + -0.6 153,480 - +0.5 153,480 - -1.2 153,480 - -1.2 153,482 - +1.8 153,512 + CA264_00705 0.10 +0.3 153,513 - CA264_00705 0.11 +0.2 153,614 + CA264_00705 0.41 +0.2 153,614 + CA264_00705 0.41 +0.9 153,615 - CA264_00705 0.41 +0.5 153,752 + CA264_00705 0.82 +0.0 153,753 - CA264_00705 0.83 +0.8 153,753 - CA264_00705 0.83 -0.0 153,792 + -0.5 153,792 + -0.5 153,793 - +0.4 153,817 + +0.1 153,871 + -0.4 153,887 - +0.5 154,092 - CA264_00710 0.28 +0.2 154,149 - CA264_00710 0.36 +0.8 154,149 - CA264_00710 0.36 -1.5 154,174 - CA264_00710 0.39 +0.3 154,286 + CA264_00710 0.54 -0.7 154,314 + CA264_00710 0.57 +0.4 154,315 - CA264_00710 0.58 -0.2 154,370 + CA264_00710 0.65 +0.4 154,415 + CA264_00710 0.71 -1.5 154,416 - CA264_00710 0.71 +0.1 154,416 - CA264_00710 0.71 -0.2 154,423 - CA264_00710 0.72 +0.1 154,642 + +0.1 154,643 - +0.1 154,756 - CA264_00715 0.10 -1.0 154,780 + CA264_00715 0.12 -0.1 154,782 + CA264_00715 0.12 +0.5 154,810 - CA264_00715 0.15 +0.5
Or see this region's nucleotide sequence