Strain Fitness in Bosea sp. OAE506 around ABIE41_RS06660

Experiment: R2A outgrowth control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	R2A outgrowth control
1,364,866	+		ABIE41_RS06655	0.19	+0.7
1,364,866	+		ABIE41_RS06655	0.19	+0.4
1,364,866	+		ABIE41_RS06655	0.19	-0.1
1,364,866	+		ABIE41_RS06655	0.19	+0.7
1,364,866	+		ABIE41_RS06655	0.19	-1.0
1,364,866	+		ABIE41_RS06655	0.19	-0.4
1,364,866	+		ABIE41_RS06655	0.19	+0.1
1,364,866	+		ABIE41_RS06655	0.19	+0.1
1,364,866	+		ABIE41_RS06655	0.19	+0.4
1,364,867	-		ABIE41_RS06655	0.19	+0.5
1,364,867	-		ABIE41_RS06655	0.19	-0.3
1,364,867	-		ABIE41_RS06655	0.19	-1.6
1,364,867	-		ABIE41_RS06655	0.19	-0.5
1,364,867	-		ABIE41_RS06655	0.19	-0.6
1,364,867	-		ABIE41_RS06655	0.19	-1.9
1,364,867	-		ABIE41_RS06655	0.19	-1.3
1,364,872	+		ABIE41_RS06655	0.20	+1.9
1,364,935	-		ABIE41_RS06655	0.25	-1.6
1,364,960	+		ABIE41_RS06655	0.28	+0.7
1,364,960	+		ABIE41_RS06655	0.28	-0.2
1,364,960	+		ABIE41_RS06655	0.28	+0.1
1,364,960	+		ABIE41_RS06655	0.28	-0.0
1,364,960	+		ABIE41_RS06655	0.28	+0.1
1,364,960	+		ABIE41_RS06655	0.28	+1.1
1,364,961	-		ABIE41_RS06655	0.28	-0.4
1,364,961	-		ABIE41_RS06655	0.28	+0.0
1,364,961	-		ABIE41_RS06655	0.28	+0.8
1,364,961	-		ABIE41_RS06655	0.28	+1.4
1,364,961	-		ABIE41_RS06655	0.28	+0.1
1,364,961	-		ABIE41_RS06655	0.28	-0.3
1,364,961	-		ABIE41_RS06655	0.28	-0.9
1,364,987	-		ABIE41_RS06655	0.30	+1.1
1,365,067	+		ABIE41_RS06655	0.37	-0.1
1,365,067	+		ABIE41_RS06655	0.37	-0.4
1,365,067	+		ABIE41_RS06655	0.37	+1.0
1,365,067	+		ABIE41_RS06655	0.37	+0.0
1,365,067	+		ABIE41_RS06655	0.37	+1.0
1,365,067	+		ABIE41_RS06655	0.37	-1.9
1,365,067	+		ABIE41_RS06655	0.37	+1.1
1,365,067	+		ABIE41_RS06655	0.37	-0.4
1,365,068	-		ABIE41_RS06655	0.37	+0.8
1,365,068	-		ABIE41_RS06655	0.37	+0.3
1,365,068	-		ABIE41_RS06655	0.37	+0.4
1,365,068	-		ABIE41_RS06655	0.37	-1.1
1,365,068	-		ABIE41_RS06655	0.37	-1.5
1,365,068	-		ABIE41_RS06655	0.37	-0.7
1,365,206	-		ABIE41_RS06655	0.50	-3.3
1,365,206	-		ABIE41_RS06655	0.50	-0.1
1,365,233	-		ABIE41_RS06655	0.52	+0.4
1,365,278	+		ABIE41_RS06655	0.56	+0.1
1,365,279	-		ABIE41_RS06655	0.56	+1.3
1,365,279	-		ABIE41_RS06655	0.56	+0.2
1,365,279	-		ABIE41_RS06655	0.56	-1.8
1,365,323	+		ABIE41_RS06655	0.60	-1.8
1,365,323	+		ABIE41_RS06655	0.60	+0.2
1,365,323	+		ABIE41_RS06655	0.60	-0.2
1,365,323	+		ABIE41_RS06655	0.60	+0.3
1,365,323	+		ABIE41_RS06655	0.60	-1.0
1,365,323	+		ABIE41_RS06655	0.60	-0.5
1,365,323	+		ABIE41_RS06655	0.60	+0.2
1,365,323	+		ABIE41_RS06655	0.60	+0.4
1,365,323	+		ABIE41_RS06655	0.60	-0.2
1,365,323	+		ABIE41_RS06655	0.60	+1.3
1,365,323	+		ABIE41_RS06655	0.60	-0.7
1,365,323	+		ABIE41_RS06655	0.60	+1.3
1,365,323	+		ABIE41_RS06655	0.60	-0.2
1,365,324	-		ABIE41_RS06655	0.60	+0.6
1,365,324	-		ABIE41_RS06655	0.60	+3.3
1,365,324	-		ABIE41_RS06655	0.60	-0.5
1,365,324	-		ABIE41_RS06655	0.60	-0.5
1,365,324	-		ABIE41_RS06655	0.60	-1.6
1,365,324	-		ABIE41_RS06655	0.60	-0.7
1,365,324	-		ABIE41_RS06655	0.60	-0.1
1,365,324	-		ABIE41_RS06655	0.60	+0.3
1,365,324	-		ABIE41_RS06655	0.60	-0.3
1,365,324	-		ABIE41_RS06655	0.60	+1.6
1,365,324	-		ABIE41_RS06655	0.60	-0.0
1,365,408	+		ABIE41_RS06655	0.68	+0.0
1,365,408	+		ABIE41_RS06655	0.68	+0.3
1,365,408	+		ABIE41_RS06655	0.68	-4.1
1,365,409	-		ABIE41_RS06655	0.68	-0.1
1,365,409	-		ABIE41_RS06655	0.68	+0.8
1,365,409	-		ABIE41_RS06655	0.68	+1.7
1,365,409	-		ABIE41_RS06655	0.68	-0.5
1,365,611	+		ABIE41_RS06655	0.86	-0.1
1,365,813	+				-0.2
1,365,813	+				-0.6
1,365,813	+				+0.5
1,365,813	+				-0.0
1,365,813	+				-1.3
1,365,813	+				+0.1
1,365,814	-				+1.1
1,365,814	-				+1.3
1,365,814	-				-0.1
1,366,266	+		ABIE41_RS06660	0.48	+0.6
1,366,266	+		ABIE41_RS06660	0.48	+1.3
1,366,266	+		ABIE41_RS06660	0.48	+0.6
1,366,266	+		ABIE41_RS06660	0.48	-1.9
1,366,266	+		ABIE41_RS06660	0.48	-0.5
1,366,266	+		ABIE41_RS06660	0.48	-0.3
1,366,266	+		ABIE41_RS06660	0.48	-1.1
1,366,267	-		ABIE41_RS06660	0.48	-0.3
1,366,267	-		ABIE41_RS06660	0.48	+0.3
1,366,267	-		ABIE41_RS06660	0.48	+0.2
1,366,267	-		ABIE41_RS06660	0.48	-0.1
1,366,267	-		ABIE41_RS06660	0.48	+0.7
1,366,267	-		ABIE41_RS06660	0.48	+0.2
1,366,284	+		ABIE41_RS06660	0.49	+0.5
1,366,284	+		ABIE41_RS06660	0.49	-1.2
1,366,285	-		ABIE41_RS06660	0.50	+0.9
1,366,285	-		ABIE41_RS06660	0.50	-0.2
1,366,333	+		ABIE41_RS06660	0.54	+0.3
1,366,333	+		ABIE41_RS06660	0.54	-0.5
1,366,333	+		ABIE41_RS06660	0.54	-0.3
1,366,333	+		ABIE41_RS06660	0.54	-0.5
1,366,333	+		ABIE41_RS06660	0.54	-1.0
1,366,334	-		ABIE41_RS06660	0.54	+0.3
1,366,334	-		ABIE41_RS06660	0.54	+0.8
1,366,334	-		ABIE41_RS06660	0.54	-1.8
1,366,334	-		ABIE41_RS06660	0.54	-0.9
1,366,334	-		ABIE41_RS06660	0.54	+0.5
1,366,608	+		ABIE41_RS06660	0.81	+0.6
1,366,608	+		ABIE41_RS06660	0.81	+2.4
1,366,608	+		ABIE41_RS06660	0.81	+0.7
1,366,608	+		ABIE41_RS06660	0.81	+2.4
1,366,609	-		ABIE41_RS06660	0.81	-0.1
1,366,609	-		ABIE41_RS06660	0.81	-0.4
1,366,609	-		ABIE41_RS06660	0.81	-2.0
1,366,620	+		ABIE41_RS06660	0.82	+1.3
1,366,620	+		ABIE41_RS06660	0.82	+0.5
1,366,620	+		ABIE41_RS06660	0.82	+0.8
1,366,620	+		ABIE41_RS06660	0.82	-0.0
1,366,620	+		ABIE41_RS06660	0.82	+0.0
1,366,620	+		ABIE41_RS06660	0.82	+1.7
1,366,621	-		ABIE41_RS06660	0.82	+0.1
1,366,621	-		ABIE41_RS06660	0.82	-0.8
1,366,621	-		ABIE41_RS06660	0.82	+0.4
1,366,621	-		ABIE41_RS06660	0.82	-0.2
1,366,659	+		ABIE41_RS06660	0.86	-0.6
1,366,659	+		ABIE41_RS06660	0.86	-1.3
1,366,660	-		ABIE41_RS06660	0.86	-0.1
1,366,665	-		ABIE41_RS06660	0.87	-0.4
1,366,728	+				-2.7
1,366,728	+				-0.0
1,366,728	+				-2.1
1,366,729	-				+0.5
1,366,729	-				+0.4
1,366,729	-				+0.3
1,366,729	-				+0.7
1,366,761	+				+0.1
1,366,761	+				+0.8
1,366,761	+				-0.6
1,366,761	+				-1.4
1,366,761	+				+0.3
1,366,762	-				-0.1
1,366,762	-				+1.1
1,366,762	-				+0.1
1,366,790	+				-1.4
1,366,791	-				+0.3
1,366,791	-				+0.3
1,366,791	-				+1.7
1,366,797	+				-2.4
1,366,797	+				+0.5
1,366,797	+				+0.6
1,366,797	+				-0.2
1,366,798	-				+0.2
1,366,798	-				-0.2
1,366,798	-				-0.3
1,366,798	-				-0.1
1,366,842	+				-0.1
1,366,846	+				-0.3
1,366,859	+				+0.2
1,366,859	+				+0.1
1,366,859	+				-0.1
1,366,859	+				+1.7
1,366,859	+				-0.6
1,366,859	+				-0.6
1,366,859	+				+0.5
1,366,861	+				+0.5
1,366,974	-		ABIE41_RS06665	0.11	-0.1
1,366,979	+		ABIE41_RS06665	0.11	+0.0
1,366,979	+		ABIE41_RS06665	0.11	+3.1
1,366,979	+		ABIE41_RS06665	0.11	+0.2
1,366,979	+		ABIE41_RS06665	0.11	-0.4
1,366,980	-		ABIE41_RS06665	0.12	-0.1
1,366,980	-		ABIE41_RS06665	0.12	+0.4
1,366,980	-		ABIE41_RS06665	0.12	+0.0
1,366,980	-		ABIE41_RS06665	0.12	+1.7
1,366,980	-		ABIE41_RS06665	0.12	-0.6
1,366,980	-		ABIE41_RS06665	0.12	-1.2
1,366,980	-		ABIE41_RS06665	0.12	-0.5
1,366,980	-		ABIE41_RS06665	0.12	-0.5
1,367,037	+		ABIE41_RS06665	0.17	+0.2
1,367,037	+		ABIE41_RS06665	0.17	-0.8
1,367,052	+		ABIE41_RS06665	0.19	-0.7
1,367,052	+		ABIE41_RS06665	0.19	-0.6
1,367,052	+		ABIE41_RS06665	0.19	+2.3
1,367,052	+		ABIE41_RS06665	0.19	-0.9
1,367,052	+		ABIE41_RS06665	0.19	+0.4
1,367,052	+		ABIE41_RS06665	0.19	-0.5
1,367,053	-		ABIE41_RS06665	0.19	-0.7
1,367,053	-		ABIE41_RS06665	0.19	+0.9
1,367,053	-		ABIE41_RS06665	0.19	-1.5
1,367,053	-		ABIE41_RS06665	0.19	+0.7
1,367,054	+		ABIE41_RS06665	0.19	+0.1
1,367,054	+		ABIE41_RS06665	0.19	-0.6
1,367,054	+		ABIE41_RS06665	0.19	-1.4
1,367,054	+		ABIE41_RS06665	0.19	+1.7
1,367,054	+		ABIE41_RS06665	0.19	-0.4
1,367,054	+		ABIE41_RS06665	0.19	-0.3
1,367,054	+		ABIE41_RS06665	0.19	+0.5
1,367,054	+		ABIE41_RS06665	0.19	-0.2
1,367,054	+		ABIE41_RS06665	0.19	+0.1
1,367,054	+		ABIE41_RS06665	0.19	-0.5
1,367,054	+		ABIE41_RS06665	0.19	-1.2
1,367,054	+		ABIE41_RS06665	0.19	+0.7
1,367,054	+		ABIE41_RS06665	0.19	-4.1
1,367,054	+		ABIE41_RS06665	0.19	-1.5
1,367,055	-		ABIE41_RS06665	0.19	+0.4
1,367,055	-		ABIE41_RS06665	0.19	+0.6
1,367,055	-		ABIE41_RS06665	0.19	-1.1
1,367,055	-		ABIE41_RS06665	0.19	-0.4
1,367,055	-		ABIE41_RS06665	0.19	-0.5
1,367,055	-		ABIE41_RS06665	0.19	-0.1
1,367,055	-		ABIE41_RS06665	0.19	+0.0
1,367,055	-		ABIE41_RS06665	0.19	-0.9
1,367,055	-		ABIE41_RS06665	0.19	+1.7
1,367,055	-		ABIE41_RS06665	0.19	-5.4
1,367,055	-		ABIE41_RS06665	0.19	+0.3
1,367,055	-		ABIE41_RS06665	0.19	+0.5
1,367,055	-		ABIE41_RS06665	0.19	+0.4
1,367,059	+		ABIE41_RS06665	0.19	-0.2
1,367,060	-		ABIE41_RS06665	0.19	-1.5
1,367,060	-		ABIE41_RS06665	0.19	+0.7
1,367,067	+		ABIE41_RS06665	0.20	+0.3
1,367,067	+		ABIE41_RS06665	0.20	-1.0
1,367,067	+		ABIE41_RS06665	0.20	+0.8
1,367,067	+		ABIE41_RS06665	0.20	-0.2
1,367,067	+		ABIE41_RS06665	0.20	+0.7
1,367,067	+		ABIE41_RS06665	0.20	+0.5
1,367,067	+		ABIE41_RS06665	0.20	+0.1
1,367,067	+		ABIE41_RS06665	0.20	+0.1
1,367,067	+		ABIE41_RS06665	0.20	-0.2
1,367,068	-		ABIE41_RS06665	0.20	+0.8
1,367,068	-		ABIE41_RS06665	0.20	+1.5
1,367,068	-		ABIE41_RS06665	0.20	-3.5
1,367,068	-		ABIE41_RS06665	0.20	+0.3
1,367,068	-		ABIE41_RS06665	0.20	-0.1
1,367,068	-		ABIE41_RS06665	0.20	+0.1
1,367,199	+		ABIE41_RS06665	0.33	+0.4
1,367,199	+		ABIE41_RS06665	0.33	-1.8
1,367,200	-		ABIE41_RS06665	0.33	+1.4
1,367,200	-		ABIE41_RS06665	0.33	-0.6
1,367,200	-		ABIE41_RS06665	0.33	-2.1
1,367,214	+		ABIE41_RS06665	0.35	+1.2
1,367,214	+		ABIE41_RS06665	0.35	+0.6
1,367,214	+		ABIE41_RS06665	0.35	+0.7
1,367,214	+		ABIE41_RS06665	0.35	-3.7
1,367,235	+		ABIE41_RS06665	0.37	+0.3
1,367,235	+		ABIE41_RS06665	0.37	-0.3
1,367,235	+		ABIE41_RS06665	0.37	+0.4
1,367,235	+		ABIE41_RS06665	0.37	+0.3
1,367,235	+		ABIE41_RS06665	0.37	+0.5
1,367,236	-		ABIE41_RS06665	0.37	-2.1
1,367,236	-		ABIE41_RS06665	0.37	-0.7
1,367,258	+		ABIE41_RS06665	0.39	-0.1
1,367,259	-		ABIE41_RS06665	0.39	-0.2
1,367,259	-		ABIE41_RS06665	0.39	+0.5
1,367,304	-		ABIE41_RS06665	0.43	-1.5
1,367,304	-		ABIE41_RS06665	0.43	-0.1
1,367,330	+		ABIE41_RS06665	0.46	-0.2
1,367,330	+		ABIE41_RS06665	0.46	+0.3
1,367,331	-		ABIE41_RS06665	0.46	+0.2
1,367,331	-		ABIE41_RS06665	0.46	+0.3
1,367,331	-		ABIE41_RS06665	0.46	-0.4
1,367,331	-		ABIE41_RS06665	0.46	-0.3
1,367,331	-		ABIE41_RS06665	0.46	-0.7
1,367,331	-		ABIE41_RS06665	0.46	+0.1
1,367,331	-		ABIE41_RS06665	0.46	-0.2
1,367,331	-		ABIE41_RS06665	0.46	+0.7
1,367,331	-		ABIE41_RS06665	0.46	-2.5
1,367,463	+		ABIE41_RS06665	0.59	+1.5
1,367,463	+		ABIE41_RS06665	0.59	+0.3
1,367,463	+		ABIE41_RS06665	0.59	+0.3
1,367,463	+		ABIE41_RS06665	0.59	-0.1
1,367,463	+		ABIE41_RS06665	0.59	-0.3
1,367,463	+		ABIE41_RS06665	0.59	-0.3
1,367,464	-		ABIE41_RS06665	0.59	-0.7
1,367,464	-		ABIE41_RS06665	0.59	-0.2
1,367,464	-		ABIE41_RS06665	0.59	+0.0
1,367,464	-		ABIE41_RS06665	0.59	+1.1
1,367,464	-		ABIE41_RS06665	0.59	+0.4
1,367,464	-		ABIE41_RS06665	0.59	-1.6
1,367,464	-		ABIE41_RS06665	0.59	+1.1
1,367,464	-		ABIE41_RS06665	0.59	-1.0
1,367,464	-		ABIE41_RS06665	0.59	+0.8
1,367,464	-		ABIE41_RS06665	0.59	+0.5
1,367,535	+		ABIE41_RS06665	0.66	+0.4
1,367,536	-		ABIE41_RS06665	0.66	-0.5
1,367,550	+		ABIE41_RS06665	0.68	+0.5
1,367,550	+		ABIE41_RS06665	0.68	-1.9
1,367,550	+		ABIE41_RS06665	0.68	+1.2
1,367,550	+		ABIE41_RS06665	0.68	-1.9
1,367,550	+		ABIE41_RS06665	0.68	+0.5
1,367,550	+		ABIE41_RS06665	0.68	-1.6
1,367,550	+		ABIE41_RS06665	0.68	+1.0
1,367,551	-		ABIE41_RS06665	0.68	+0.5
1,367,551	-		ABIE41_RS06665	0.68	+1.4
1,367,551	-		ABIE41_RS06665	0.68	+1.1
1,367,551	-		ABIE41_RS06665	0.68	+0.7
1,367,551	-		ABIE41_RS06665	0.68	-0.9
1,367,551	-		ABIE41_RS06665	0.68	+0.9
1,367,551	-		ABIE41_RS06665	0.68	+1.1
1,367,551	-		ABIE41_RS06665	0.68	-0.7
1,367,551	-		ABIE41_RS06665	0.68	+0.1
1,367,551	-		ABIE41_RS06665	0.68	+1.0
1,367,551	-		ABIE41_RS06665	0.68	-1.2
1,367,574	+		ABIE41_RS06665	0.70	-1.5
1,367,574	+		ABIE41_RS06665	0.70	-0.8
1,367,575	-		ABIE41_RS06665	0.70	-1.4
1,367,575	-		ABIE41_RS06665	0.70	+0.8