Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_4521

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
5,400,833	-		Echvi_4520	0.20	-2.6
5,400,833	-		Echvi_4520	0.20	-1.2
5,400,839	+		Echvi_4520	0.21	-0.1
5,400,910	-		Echvi_4520	0.27	-0.4
5,400,921	-		Echvi_4520	0.27	-1.7
5,400,931	-		Echvi_4520	0.28	-0.9
5,400,931	-		Echvi_4520	0.28	-1.9
5,400,949	+		Echvi_4520	0.30	-0.2
5,400,949	+		Echvi_4520	0.30	+0.5
5,400,952	+		Echvi_4520	0.30	+0.3
5,400,952	+		Echvi_4520	0.30	-0.4
5,400,953	-		Echvi_4520	0.30	-0.8
5,401,015	+		Echvi_4520	0.35	+0.6
5,401,067	+		Echvi_4520	0.40	+1.7
5,401,067	+		Echvi_4520	0.40	+2.9
5,401,067	+		Echvi_4520	0.40	+0.5
5,401,068	-		Echvi_4520	0.40	-0.4
5,401,068	-		Echvi_4520	0.40	-1.1
5,401,068	-		Echvi_4520	0.40	-0.8
5,401,070	+		Echvi_4520	0.40	-0.2
5,401,070	+		Echvi_4520	0.40	-0.6
5,401,070	+		Echvi_4520	0.40	-0.6
5,401,070	+		Echvi_4520	0.40	+0.2
5,401,071	-		Echvi_4520	0.40	-2.0
5,401,144	-		Echvi_4520	0.46	-1.6
5,401,147	+		Echvi_4520	0.47	-0.9
5,401,148	-		Echvi_4520	0.47	+1.9
5,401,156	-		Echvi_4520	0.47	-0.3
5,401,158	+		Echvi_4520	0.48	+1.4
5,401,196	+		Echvi_4520	0.51	+0.4
5,401,196	+		Echvi_4520	0.51	-1.6
5,401,307	+		Echvi_4520	0.60	-0.1
5,401,307	+		Echvi_4520	0.60	+0.9
5,401,332	+		Echvi_4520	0.62	-2.2
5,401,364	-		Echvi_4520	0.65	-1.0
5,401,385	-		Echvi_4520	0.67	-1.4
5,401,450	-		Echvi_4520	0.72	-1.5
5,401,450	-		Echvi_4520	0.72	-0.8
5,401,451	+		Echvi_4520	0.72	+0.4
5,401,451	+		Echvi_4520	0.72	+0.4
5,401,451	+		Echvi_4520	0.72	+1.2
5,401,451	+		Echvi_4520	0.72	+0.5
5,401,452	-		Echvi_4520	0.72	+0.4
5,401,452	-		Echvi_4520	0.72	-1.4
5,401,452	-		Echvi_4520	0.72	-1.1
5,401,452	-		Echvi_4520	0.72	-0.5
5,401,452	-		Echvi_4520	0.72	+0.6
5,401,462	+		Echvi_4520	0.73	+1.0
5,401,463	-		Echvi_4520	0.73	+0.3
5,401,463	-		Echvi_4520	0.73	+1.5
5,401,463	-		Echvi_4520	0.73	-1.8
5,401,468	+		Echvi_4520	0.74	-0.2
5,401,468	+		Echvi_4520	0.74	+0.9
5,401,540	+		Echvi_4520	0.80	-0.8
5,401,541	-		Echvi_4520	0.80	-0.2
5,401,542	+		Echvi_4520	0.80	-0.4
5,401,542	+		Echvi_4520	0.80	-0.4
5,401,542	+		Echvi_4520	0.80	-0.6
5,401,543	-		Echvi_4520	0.80	+1.3
5,401,543	-		Echvi_4520	0.80	+0.5
5,401,543	-		Echvi_4520	0.80	-1.2
5,401,543	-		Echvi_4520	0.80	+0.1
5,401,543	-		Echvi_4520	0.80	-2.6
5,401,543	-		Echvi_4520	0.80	-0.6
5,401,608	+		Echvi_4520	0.86	+0.2
5,401,609	-		Echvi_4520	0.86	-0.9
5,401,631	+		Echvi_4520	0.88	+0.7
5,401,631	+		Echvi_4520	0.88	+0.4
5,401,631	+		Echvi_4520	0.88	+0.6
5,401,631	+		Echvi_4520	0.88	-0.2
5,401,632	-		Echvi_4520	0.88	+0.0
5,401,633	+		Echvi_4520	0.88	-0.6
5,401,634	-		Echvi_4520	0.88	-2.0
5,401,634	-		Echvi_4520	0.88	-0.8
5,401,637	-		Echvi_4520	0.88	-0.4
5,401,646	+		Echvi_4520	0.89	-0.2
5,401,647	-		Echvi_4520	0.89	+0.1
5,401,647	-		Echvi_4520	0.89	-0.3
5,401,649	-		Echvi_4520	0.89	-0.8
5,401,650	+		Echvi_4520	0.89	-0.1
5,401,672	+				-1.3
5,401,674	+				-0.2
5,401,674	+				-0.1
5,401,674	+				+0.4
5,401,674	+				-0.9
5,401,674	+				+1.1
5,401,674	+				-0.3
5,401,792	+				+0.0
5,401,796	+				+0.2
5,401,804	-				-2.3
5,401,805	+				-0.6
5,401,969	+				-1.1
5,401,970	-				-0.2
5,401,994	-		Echvi_4521	0.11	-1.9
5,401,999	+		Echvi_4521	0.11	-0.5
5,402,000	-		Echvi_4521	0.11	-1.3
5,402,000	-		Echvi_4521	0.11	-1.2
5,402,001	+		Echvi_4521	0.11	-1.1
5,402,001	+		Echvi_4521	0.11	+0.9
5,402,009	+		Echvi_4521	0.12	-0.1
5,402,052	+		Echvi_4521	0.15	+0.1
5,402,090	+		Echvi_4521	0.17	-1.5
5,402,117	-		Echvi_4521	0.19	-1.2
5,402,120	-		Echvi_4521	0.19	-1.7
5,402,153	+		Echvi_4521	0.21	-1.2
5,402,153	+		Echvi_4521	0.21	+0.3
5,402,154	-		Echvi_4521	0.21	-0.7
5,402,185	-		Echvi_4521	0.24	-1.2
5,402,249	+		Echvi_4521	0.28	+0.7
5,402,250	-		Echvi_4521	0.28	-0.9
5,402,250	-		Echvi_4521	0.28	-1.7
5,402,280	+		Echvi_4521	0.30	-0.7
5,402,331	+		Echvi_4521	0.33	+0.4
5,402,345	-		Echvi_4521	0.34	-1.2
5,402,436	-		Echvi_4521	0.40	-0.1
5,402,447	+		Echvi_4521	0.41	-0.5
5,402,448	-		Echvi_4521	0.41	+0.9
5,402,472	-		Echvi_4521	0.43	-0.5
5,402,479	+		Echvi_4521	0.43	-0.1
5,402,479	+		Echvi_4521	0.43	-1.4
5,402,479	+		Echvi_4521	0.43	-0.8
5,402,480	-		Echvi_4521	0.43	-1.8
5,402,480	-		Echvi_4521	0.43	-1.4
5,402,480	-		Echvi_4521	0.43	-1.1
5,402,480	-		Echvi_4521	0.43	+0.9
5,402,502	-		Echvi_4521	0.45	-1.5
5,402,564	-		Echvi_4521	0.49	-0.7
5,402,564	-		Echvi_4521	0.49	-0.1
5,402,605	+		Echvi_4521	0.52	-1.1
5,402,683	-		Echvi_4521	0.57	-3.2
5,402,729	-		Echvi_4521	0.60	-0.9
5,402,756	+		Echvi_4521	0.62	+0.3
5,402,804	+		Echvi_4521	0.65	+0.1
5,402,841	+		Echvi_4521	0.67	-0.1
5,402,978	+		Echvi_4521	0.77	+1.1
5,403,003	+		Echvi_4521	0.78	-1.2
5,403,004	-		Echvi_4521	0.78	-0.8
5,403,131	+		Echvi_4521	0.87	-0.4
5,403,144	+		Echvi_4521	0.88	+0.1
5,403,144	+		Echvi_4521	0.88	-2.6
5,403,149	+		Echvi_4521	0.88	+0.3
5,403,158	-		Echvi_4521	0.89	-0.6
5,403,190	-				+0.3
5,403,190	-				+0.3
5,403,193	+				+0.7
5,403,194	-				-1.9
5,403,194	-				-2.0
5,403,194	-				-0.4
5,403,197	+				-1.1
5,403,281	-				-0.3
5,403,308	+				-0.4
5,403,520	+		Echvi_4522	0.13	+0.3
5,403,547	+		Echvi_4522	0.15	+0.4
5,403,558	-		Echvi_4522	0.16	-1.6
5,403,660	-		Echvi_4522	0.22	-1.7
5,403,663	-		Echvi_4522	0.23	+1.1
5,403,690	-		Echvi_4522	0.25	-2.1
5,403,691	+		Echvi_4522	0.25	-1.1
5,403,691	+		Echvi_4522	0.25	-0.9
5,403,739	+		Echvi_4522	0.28	+1.1
5,403,752	-		Echvi_4522	0.29	-0.1
5,403,770	+		Echvi_4522	0.30	+0.3
5,403,771	-		Echvi_4522	0.30	-1.5
5,403,793	+		Echvi_4522	0.32	-1.0
5,403,802	-		Echvi_4522	0.32	-1.3
5,403,802	-		Echvi_4522	0.32	+1.9
5,403,802	-		Echvi_4522	0.32	-1.5
5,403,802	-		Echvi_4522	0.32	-1.3
5,403,849	+		Echvi_4522	0.35	+0.9
5,403,850	-		Echvi_4522	0.35	-0.8
5,403,983	-		Echvi_4522	0.44	-1.3
5,404,078	-		Echvi_4522	0.51	-0.4
5,404,140	-		Echvi_4522	0.55	-0.0
5,404,146	+		Echvi_4522	0.55	+0.1
5,404,147	-		Echvi_4522	0.56	-1.7
5,404,147	-		Echvi_4522	0.56	-1.7
5,404,263	-		Echvi_4522	0.63	+3.5
5,404,307	-		Echvi_4522	0.66	+0.3