Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_2767

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,301,488	-		Echvi_2766	0.71	-0.5
3,301,488	-		Echvi_2766	0.71	-0.4
3,301,603	+		Echvi_2766	0.76	+1.9
3,301,632	+		Echvi_2766	0.78	+0.9
3,301,680	-		Echvi_2766	0.80	+1.4
3,301,876	+		Echvi_2766	0.89	-0.9
3,301,877	-		Echvi_2766	0.89	-0.1
3,301,877	-		Echvi_2766	0.89	+0.6
3,301,949	-				-1.5
3,302,092	-				-0.3
3,302,105	+				-0.3
3,302,105	+				-0.1
3,302,106	-				+0.9
3,302,106	-				-0.6
3,302,108	+				-1.2
3,302,108	+				-0.7
3,302,119	+				+0.1
3,302,120	-				-0.9
3,302,122	+				+0.9
3,302,123	-				+0.8
3,302,126	+				+0.9
3,302,127	-				+0.5
3,302,162	-				-0.4
3,302,162	-				+0.8
3,302,190	+				-1.0
3,302,190	+				+0.7
3,302,192	+				-0.6
3,302,193	-				-0.4
3,302,193	-				+0.5
3,302,193	-				-1.1
3,302,250	-				+0.5
3,302,256	-				+1.9
3,302,262	-				-0.5
3,302,281	+				+0.3
3,302,284	+				+1.0
3,302,284	+				+0.5
3,302,285	-				+2.3
3,302,349	+				+0.7
3,302,448	-				+0.2
3,302,451	+				+0.3
3,302,452	-				+0.1
3,302,452	-				+1.9
3,302,457	+				+0.6
3,302,458	-				-1.1
3,302,458	-				-0.5
3,302,458	-				+0.8
3,302,556	-				-0.1
3,302,556	-				+1.2
3,302,556	-				+1.9
3,302,559	-				+0.3
3,302,631	-				-2.5
3,302,713	+		Echvi_2767	0.12	-0.6
3,302,714	-		Echvi_2767	0.12	+0.1
3,302,729	-		Echvi_2767	0.12	+0.2
3,302,761	+		Echvi_2767	0.13	-1.2
3,302,761	+		Echvi_2767	0.13	+0.3
3,302,762	-		Echvi_2767	0.13	+0.4
3,302,763	+		Echvi_2767	0.13	+0.4
3,302,763	+		Echvi_2767	0.13	+0.2
3,302,771	-		Echvi_2767	0.13	-0.5
3,302,849	+		Echvi_2767	0.15	+0.5
3,303,037	+		Echvi_2767	0.20	-1.2
3,304,194	+				+1.4
3,304,318	+		Echvi_2767	0.55	-0.5
3,304,318	+		Echvi_2767	0.55	-0.1
3,304,319	-		Echvi_2767	0.55	+2.9
3,304,319	-		Echvi_2767	0.55	+0.0
3,304,539	-		Echvi_2767	0.61	-0.7
3,304,580	+		Echvi_2767	0.62	+1.1
3,304,580	+		Echvi_2767	0.62	+0.5
3,304,580	+		Echvi_2767	0.62	+0.7
3,304,590	+		Echvi_2767	0.63	-1.6
3,304,590	+		Echvi_2767	0.63	-1.0
3,304,622	+		Echvi_2767	0.64	+0.3
3,304,622	+		Echvi_2767	0.64	+1.2
3,304,623	-		Echvi_2767	0.64	+1.4
3,304,659	-		Echvi_2767	0.65	+0.3
3,304,744	+		Echvi_2767	0.67	-1.0
3,304,756	+		Echvi_2767	0.67	+0.9
3,304,809	+		Echvi_2767	0.69	+0.7
3,304,809	+		Echvi_2767	0.69	-0.3
3,304,810	-		Echvi_2767	0.69	+2.0
3,304,906	+		Echvi_2767	0.71	-0.1
3,305,040	+		Echvi_2767	0.75	+0.7
3,305,063	-		Echvi_2767	0.76	+1.2
3,305,063	-		Echvi_2767	0.76	+0.2
3,305,189	-		Echvi_2767	0.79	-1.6
3,305,223	+		Echvi_2767	0.80	+2.2
3,305,223	+		Echvi_2767	0.80	+0.9
3,305,223	+		Echvi_2767	0.80	+0.9
3,305,224	-		Echvi_2767	0.80	-0.3
3,305,339	-		Echvi_2767	0.83	+0.3
3,305,339	-		Echvi_2767	0.83	-1.8
3,305,339	-		Echvi_2767	0.83	+0.8
3,305,380	-		Echvi_2767	0.84	+0.5
3,305,410	-		Echvi_2767	0.85	+1.2
3,305,474	+		Echvi_2767	0.87	+0.2
3,305,501	-		Echvi_2767	0.88	+2.2
3,305,564	-		Echvi_2767	0.89	-0.3
3,305,564	-		Echvi_2767	0.89	-1.1
3,305,565	+		Echvi_2767	0.89	+0.6
3,305,565	+		Echvi_2767	0.89	+0.0
3,305,566	-		Echvi_2767	0.89	+2.0
3,305,566	-		Echvi_2767	0.89	+0.8
3,305,566	-		Echvi_2767	0.89	+0.1
3,305,616	-				-0.4
3,305,640	+				+0.5
3,305,677	+				-2.6
3,305,677	+				-0.4
3,305,678	-				-0.3
3,305,678	-				-0.3
3,305,681	-				-0.1
3,305,731	+				-0.8
3,305,731	+				+1.0
3,305,732	-				-0.9
3,305,732	-				-2.1
3,305,732	-				-0.4
3,305,732	-				+0.5
3,305,733	+				+0.5
3,305,734	-				+0.1
3,305,814	+				+0.7
3,305,815	-				-1.0
3,305,818	+				+1.1
3,305,818	+				+1.2
3,305,819	-				-0.6
3,305,820	+				+0.3
3,305,956	+				+0.8
3,306,016	-				+0.7
3,306,018	+				+0.3
3,306,018	+				+0.9
3,306,034	-				+0.6
3,306,046	-				-3.0
3,306,050	-				-0.3
3,306,112	-				+0.4
3,306,133	+				+1.1
3,306,133	+				+0.3
3,306,136	+				-0.5
3,306,155	+				+0.0
3,306,155	+				+1.3
3,306,155	+				-0.1
3,306,155	+				+2.3
3,306,156	-				-1.0
3,306,156	-				+0.3
3,306,156	-				+1.9
3,306,158	-				+0.2
3,306,158	-				-1.3
3,306,158	-				-0.6
3,306,158	-				-0.4
3,306,243	-		Echvi_2769	0.12	-0.5
3,306,326	-		Echvi_2769	0.16	-0.4
3,306,329	-		Echvi_2769	0.16	-0.2
3,306,363	+				-0.1
3,306,363	+		Echvi_2769	0.18	+0.0
3,306,364	-		Echvi_2769	0.18	+0.9
3,306,368	+		Echvi_2769	0.18	-0.1
3,306,384	-		Echvi_2769	0.19	-0.7
3,306,457	-		Echvi_2769	0.22	+0.3
3,306,529	+		Echvi_2769	0.26	+0.1
3,306,542	+		Echvi_2769	0.26	+0.0
3,306,543	-		Echvi_2769	0.26	-0.1
3,306,543	-		Echvi_2769	0.26	-0.5
3,306,543	-		Echvi_2769	0.26	+0.6
3,306,558	-		Echvi_2769	0.27	-1.0
3,306,560	+		Echvi_2769	0.27	+1.1
3,306,560	+		Echvi_2769	0.27	+0.0
3,306,561	-		Echvi_2769	0.27	-0.1
3,306,566	+		Echvi_2769	0.27	-0.0
3,306,705	-		Echvi_2769	0.34	+0.2
3,306,705	-		Echvi_2769	0.34	-0.5
3,306,705	-		Echvi_2769	0.34	-0.3
3,306,706	+		Echvi_2769	0.34	-0.1
3,306,706	+		Echvi_2769	0.34	+0.0
3,306,707	-		Echvi_2769	0.34	-1.5
3,306,709	+		Echvi_2769	0.34	+0.1
3,306,793	-		Echvi_2769	0.38	-0.7
3,306,793	-		Echvi_2769	0.38	+0.4
3,306,805	+		Echvi_2769	0.38	-0.4
3,306,805	+		Echvi_2769	0.38	+0.2
3,306,806	-		Echvi_2769	0.38	-1.9
3,306,806	-		Echvi_2769	0.38	+1.6
3,306,806	-		Echvi_2769	0.38	-0.3
3,306,812	+		Echvi_2769	0.39	+0.9
3,306,812	+		Echvi_2769	0.39	-0.1
3,306,820	-		Echvi_2769	0.39	-0.0
3,306,914	+		Echvi_2769	0.43	+0.3
3,306,914	+		Echvi_2769	0.43	-0.7
3,306,915	-		Echvi_2769	0.43	+0.4
3,306,949	+		Echvi_2769	0.45	+0.9
3,306,949	+		Echvi_2769	0.45	-0.3
3,306,950	-		Echvi_2769	0.45	-1.0
3,306,950	-		Echvi_2769	0.45	+0.7
3,306,950	-		Echvi_2769	0.45	-0.5
3,306,953	+		Echvi_2769	0.45	-0.3
3,306,954	-		Echvi_2769	0.45	+1.0
3,306,954	-		Echvi_2769	0.45	-0.6
3,306,954	-		Echvi_2769	0.45	+0.6
3,306,954	-		Echvi_2769	0.45	+0.4