Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1062

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,222,304	+				+0.6
1,222,335	-				-1.4
1,222,336	+				-0.2
1,222,404	+				+0.4
1,222,413	+				+0.6
1,222,414	-				-0.6
1,222,417	+				-1.1
1,222,423	+				+0.6
1,222,424	-				-0.8
1,222,424	-				-2.4
1,222,426	+				-2.1
1,222,432	+				-0.1
1,222,432	+				-2.2
1,222,433	-				-0.2
1,222,433	-				-0.5
1,222,479	+				-0.5
1,222,480	-				+0.5
1,222,480	-				+0.2
1,222,501	+				-0.3
1,222,501	+				+0.1
1,222,502	-				+1.2
1,222,502	-				-0.2
1,222,502	-				-0.2
1,222,509	+				+0.1
1,222,510	-				-0.2
1,222,512	-				+1.6
1,222,512	-				-1.4
1,222,657	+				+0.2
1,222,678	+				+0.4
1,222,678	+				-0.0
1,222,688	+				+0.2
1,222,689	-				+1.8
1,222,692	+				+1.3
1,222,695	+				-1.5
1,222,702	+				+0.4
1,222,739	+				+0.6
1,222,851	+				+0.0
1,222,851	+				+0.3
1,222,855	+				-0.6
1,222,855	+				+0.4
1,222,855	+				-1.7
1,222,855	+				+1.3
1,222,855	+				-0.0
1,222,857	+				+1.2
1,222,857	+				-1.1
1,222,857	+				+0.4
1,222,857	+				-1.8
1,222,857	+				-0.4
1,222,857	+				-0.3
1,222,945	+				+0.2
1,222,976	+				-0.2
1,222,999	+				-0.0
1,222,999	+				-0.3
1,223,005	+				-0.8
1,223,037	+				-1.0
1,223,073	+				-0.8
1,223,097	+				+0.7
1,223,101	+				+1.6
1,223,101	+				-1.0
1,223,101	+				+1.2
1,223,180	+		Echvi_1062	0.13	-0.5
1,223,224	+		Echvi_1062	0.19	-0.4
1,223,224	+				+1.2
1,223,224	+		Echvi_1062	0.19	-0.2
1,223,228	+		Echvi_1062	0.20	+0.7
1,223,228	+		Echvi_1062	0.20	-0.7
1,223,232	+		Echvi_1062	0.20	+0.5
1,223,232	+		Echvi_1062	0.20	+1.2
1,223,232	+		Echvi_1062	0.20	+0.7
1,223,289	+		Echvi_1062	0.28	+1.1
1,223,290	-		Echvi_1062	0.28	-0.4
1,223,290	-		Echvi_1062	0.28	+2.6
1,223,294	+		Echvi_1062	0.28	+0.3
1,223,294	+		Echvi_1062	0.28	-1.0
1,223,294	+		Echvi_1062	0.28	+0.1
1,223,298	+		Echvi_1062	0.29	+0.8
1,223,298	+		Echvi_1062	0.29	+0.7
1,223,298	+		Echvi_1062	0.29	+0.4
1,223,298	+		Echvi_1062	0.29	+0.2
1,223,298	+		Echvi_1062	0.29	-0.2
1,223,299	-		Echvi_1062	0.29	-0.3
1,223,299	-		Echvi_1062	0.29	+1.4
1,223,417	+		Echvi_1062	0.44	-0.3
1,223,418	-		Echvi_1062	0.44	+0.7
1,223,431	+		Echvi_1062	0.46	+1.4
1,223,438	-		Echvi_1062	0.47	-0.8
1,223,474	+		Echvi_1062	0.52	+1.3
1,223,474	+		Echvi_1062	0.52	-0.2
1,223,475	-		Echvi_1062	0.52	-0.5
1,223,482	+		Echvi_1062	0.53	+0.5
1,223,548	+		Echvi_1062	0.61	+1.1
1,223,587	+		Echvi_1062	0.67	+0.6
1,223,588	-		Echvi_1062	0.67	+0.9
1,223,614	-		Echvi_1062	0.70	-0.9
1,223,617	-		Echvi_1062	0.70	+0.6
1,223,654	+		Echvi_1062	0.75	+0.9
1,223,681	+		Echvi_1062	0.79	+0.6
1,223,681	+		Echvi_1062	0.79	-0.7
1,223,681	+		Echvi_1062	0.79	+0.1
1,223,682	-		Echvi_1062	0.79	+1.1
1,223,683	+		Echvi_1062	0.79	+2.0
1,223,683	+		Echvi_1062	0.79	+1.2
1,223,683	+		Echvi_1062	0.79	-0.1
1,223,683	+		Echvi_1062	0.79	+0.5
1,223,684	-		Echvi_1062	0.79	+1.2
1,223,684	-		Echvi_1062	0.79	+1.1
1,223,696	+		Echvi_1062	0.81	-1.6
1,223,696	+		Echvi_1062	0.81	-0.9
1,223,754	+		Echvi_1062	0.88	+0.1
1,223,754	+		Echvi_1062	0.88	+0.6
1,223,754	+		Echvi_1062	0.88	-0.3
1,223,755	-		Echvi_1062	0.88	+1.5
1,223,755	-		Echvi_1062	0.88	-0.7
1,223,755	-		Echvi_1062	0.88	+0.8
1,223,757	+		Echvi_1062	0.89	-0.4
1,223,757	+		Echvi_1062	0.89	-0.6
1,223,758	-		Echvi_1062	0.89	-0.0
1,223,758	-		Echvi_1062	0.89	-0.7
1,223,761	+		Echvi_1062	0.89	+0.4
1,223,761	+		Echvi_1062	0.89	+0.9
1,223,761	+		Echvi_1062	0.89	+0.6
1,223,762	-		Echvi_1062	0.89	-1.1
1,223,818	+				+0.5
1,223,818	+				+0.6
1,223,819	-				+1.4
1,223,884	-				-0.5
1,223,903	+				+0.5
1,223,909	+				+0.0
1,223,909	+				+0.6
1,223,909	+				-1.6
1,223,909	+				+0.6
1,223,910	-				+0.5
1,223,910	-				-1.6
1,223,910	-				-0.8
1,223,910	-				-0.5
1,223,910	-				-1.9
1,223,910	-				+0.6
1,223,991	-		Echvi_1063	0.15	-0.1
1,223,991	-		Echvi_1063	0.15	-1.0
1,224,005	-		Echvi_1063	0.17	-0.2
1,224,023	-		Echvi_1063	0.19	-1.0
1,224,023	-		Echvi_1063	0.19	-0.1
1,224,032	+		Echvi_1063	0.20	+0.3
1,224,033	-		Echvi_1063	0.20	+0.2
1,224,034	+		Echvi_1063	0.20	-0.1
1,224,034	+		Echvi_1063	0.20	-1.4
1,224,034	+		Echvi_1063	0.20	-0.1
1,224,035	-		Echvi_1063	0.20	+0.5
1,224,089	+		Echvi_1063	0.27	+1.3
1,224,089	+		Echvi_1063	0.27	+1.7
1,224,098	-		Echvi_1063	0.28	-0.2
1,224,118	-		Echvi_1063	0.31	+0.2
1,224,154	+		Echvi_1063	0.35	-1.4
1,224,197	-		Echvi_1063	0.40	+1.3
1,224,197	-		Echvi_1063	0.40	+1.2
1,224,197	-		Echvi_1063	0.40	+0.0
1,224,235	+		Echvi_1063	0.45	-1.0
1,224,236	-		Echvi_1063	0.45	+0.2
1,224,236	-		Echvi_1063	0.45	-1.2
1,224,304	+		Echvi_1063	0.54	-0.6
1,224,305	-		Echvi_1063	0.54	+0.3
1,224,342	-		Echvi_1063	0.58	-1.8
1,224,348	+		Echvi_1063	0.59	-1.3
1,224,349	-		Echvi_1063	0.59	-0.3
1,224,349	-		Echvi_1063	0.59	-0.4
1,224,447	+		Echvi_1063	0.71	-0.8
1,224,492	+		Echvi_1063	0.77	+1.2
1,224,527	-		Echvi_1063	0.81	+0.2
1,224,567	+		Echvi_1063	0.86	+0.3
1,224,568	-		Echvi_1063	0.86	-0.4
1,224,570	+		Echvi_1063	0.86	+0.6
1,224,570	+		Echvi_1063	0.86	-0.8
1,224,570	+		Echvi_1063	0.86	+0.3
1,224,616	+				-0.0
1,224,616	+				-0.1
1,224,617	-				-2.4
1,224,617	-				-0.8
1,224,649	+				-1.0
1,224,650	-				+1.9
1,224,733	+				-1.0
1,224,733	+				-0.5
1,224,734	-				-1.3
1,224,734	-				+0.0
1,224,736	+				+0.2
1,224,736	+				+0.8
1,224,737	-				+0.2
1,224,737	-				+0.2
1,224,737	-				+0.1
1,224,742	-				-0.2
1,224,746	-				-0.4
1,224,746	-				+2.2
1,224,746	-				-1.1
1,224,799	+				+1.1
1,224,799	+				+0.3
1,224,800	-				-1.0
1,224,800	-				-1.5
1,224,800	-				+2.6
1,224,800	-				+1.2
1,224,807	+				+0.3
1,224,807	+				+1.0
1,224,807	+				-0.8
1,224,807	+				-0.2
1,224,808	-				-0.4
1,224,811	+				-0.7
1,224,812	-				+0.4
1,224,812	-				+0.6
1,224,818	+				+0.0
1,224,818	+				+0.3
1,224,819	-				+0.3
1,224,819	-				-0.4
1,224,819	-				-0.3
1,224,819	-				-0.0
1,224,825	+				-0.4
1,224,825	+				-0.1
1,224,840	-				+0.3