Strain Fitness in Echinicola vietnamensis KMM 6221, DSM 17526 around Echvi_1030

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
1,190,361	+		Echvi_1028	0.86	-0.9
1,190,361	+		Echvi_1028	0.86	-1.1
1,190,365	+		Echvi_1028	0.86	-0.2
1,190,365	+		Echvi_1028	0.86	+0.2
1,190,365	+		Echvi_1028	0.86	-0.7
1,190,365	+		Echvi_1028	0.86	+1.1
1,190,365	+		Echvi_1028	0.86	+0.1
1,190,365	+		Echvi_1028	0.86	+0.2
1,190,365	+		Echvi_1028	0.86	+1.4
1,190,366	-		Echvi_1028	0.86	-0.1
1,190,366	-		Echvi_1028	0.86	-0.1
1,190,380	-		Echvi_1028	0.88	-0.2
1,190,380	-		Echvi_1028	0.88	-0.0
1,190,382	+		Echvi_1028	0.88	-0.2
1,190,406	+				+0.9
1,190,407	-				-0.2
1,190,411	+				+1.8
1,190,414	-				+0.6
1,190,418	+				-1.3
1,190,428	+				+0.7
1,190,428	+				-0.8
1,190,428	+				-0.1
1,190,431	+				+1.2
1,190,431	+				+0.9
1,190,431	+				-0.7
1,190,431	+				+0.2
1,190,431	+				-0.4
1,190,432	-				+0.4
1,190,432	-				-0.2
1,190,469	+				-0.0
1,190,472	+				-0.9
1,190,472	+				-1.0
1,190,472	+				+0.0
1,190,472	+				-0.6
1,190,473	-				+0.0
1,190,473	-				+0.4
1,190,482	+				+0.3
1,190,499	+				-0.2
1,190,525	+				-1.0
1,190,525	+				+0.6
1,190,535	+				-1.6
1,190,535	+				-1.7
1,190,535	+				+0.6
1,190,536	-				-0.3
1,190,539	+				-0.2
1,190,539	+				+0.4
1,190,540	-				-0.4
1,190,581	-				-0.7
1,190,630	+				-0.1
1,190,640	+				-0.2
1,190,640	+				+0.5
1,190,640	+				+0.7
1,190,756	+		Echvi_1029	0.21	+0.6
1,190,756	+		Echvi_1029	0.21	-0.4
1,190,756	+		Echvi_1029	0.21	+0.6
1,190,757	-		Echvi_1029	0.21	-0.9
1,190,757	-		Echvi_1029	0.21	+0.7
1,190,757	-		Echvi_1029	0.21	-0.6
1,190,757	-		Echvi_1029	0.21	-1.3
1,190,757	-		Echvi_1029	0.21	-0.9
1,190,757	-		Echvi_1029	0.21	-0.2
1,190,774	+		Echvi_1029	0.23	+0.5
1,190,774	+		Echvi_1029	0.23	+0.6
1,190,775	-		Echvi_1029	0.23	+1.6
1,190,777	-		Echvi_1029	0.24	+0.2
1,190,777	-		Echvi_1029	0.24	+0.2
1,190,787	-		Echvi_1029	0.25	-0.7
1,190,864	+		Echvi_1029	0.37	-0.8
1,190,864	+		Echvi_1029	0.37	+1.2
1,190,864	+		Echvi_1029	0.37	+0.5
1,190,865	-		Echvi_1029	0.37	-0.3
1,190,894	+		Echvi_1029	0.42	-1.6
1,190,894	+		Echvi_1029	0.42	+0.2
1,190,894	+		Echvi_1029	0.42	-0.3
1,190,894	+		Echvi_1029	0.42	+0.6
1,190,894	+		Echvi_1029	0.42	-0.5
1,190,894	+		Echvi_1029	0.42	-1.2
1,190,895	-		Echvi_1029	0.42	-1.0
1,190,895	-		Echvi_1029	0.42	+2.7
1,190,897	-		Echvi_1029	0.42	+0.8
1,190,900	+		Echvi_1029	0.42	-1.0
1,190,969	-		Echvi_1029	0.53	+0.6
1,190,977	+		Echvi_1029	0.54	+0.4
1,191,114	+		Echvi_1029	0.75	+0.3
1,191,129	-		Echvi_1029	0.77	-1.2
1,191,221	+				-0.3
1,191,222	-				+0.3
1,191,222	-				+0.9
1,191,222	-				+0.7
1,191,222	-				+0.9
1,191,234	-				-0.2
1,191,234	-				-1.2
1,191,270	+				-0.5
1,191,490	-		Echvi_1030	0.31	+0.1
1,191,490	-		Echvi_1030	0.31	+0.5
1,191,495	-		Echvi_1030	0.33	-1.3
1,191,515	+		Echvi_1030	0.37	+1.8
1,191,515	+		Echvi_1030	0.37	+4.0
1,191,532	+		Echvi_1030	0.41	+0.9
1,191,532	+		Echvi_1030	0.41	+0.0
1,191,533	-		Echvi_1030	0.42	+0.6
1,191,553	+		Echvi_1030	0.46	-1.3
1,191,575	+		Echvi_1030	0.52	+1.9
1,191,575	+		Echvi_1030	0.52	-0.8
1,191,575	+		Echvi_1030	0.52	-0.6
1,191,575	+		Echvi_1030	0.52	+1.8
1,191,575	+		Echvi_1030	0.52	+0.4
1,191,578	+		Echvi_1030	0.52	+1.2
1,191,578	+		Echvi_1030	0.52	+0.9
1,191,578	+		Echvi_1030	0.52	+0.3
1,191,605	+		Echvi_1030	0.59	+0.8
1,191,605	+		Echvi_1030	0.59	-0.4
1,191,606	-		Echvi_1030	0.59	-0.3
1,191,644	+		Echvi_1030	0.68	+0.8
1,191,644	+		Echvi_1030	0.68	+1.1
1,191,644	+		Echvi_1030	0.68	-0.2
1,191,645	-		Echvi_1030	0.68	+0.1
1,191,657	+		Echvi_1030	0.71	-0.5
1,191,749	+				+0.9
1,191,749	+				-2.2
1,191,782	+				-0.5
1,191,782	+				-0.5
1,191,783	-				+0.3
1,191,783	-				+0.9
1,191,812	+				-0.2
1,191,815	-				-0.8
1,191,815	-				+0.0
1,191,815	-				+0.7
1,191,818	+				-0.3
1,191,818	+				+1.8
1,191,819	-				-0.7
1,191,832	-				-0.2
1,191,834	+				-0.5
1,191,883	+				-0.2
1,191,907	+				-0.3
1,191,920	-				-0.8
1,191,920	-				-0.7
1,191,921	+				-1.5
1,191,942	+				+0.2
1,191,942	+				+0.3
1,191,942	+				+0.6
1,191,942	+				+1.2
1,191,943	-				+0.5
1,191,943	-				-0.0
1,191,943	-				+0.8
1,191,949	+				-0.5
1,191,950	-				+0.1
1,192,021	-				-0.8
1,192,021	-				-2.1
1,192,021	-				-0.9
1,192,021	-				+1.8
1,192,024	-				+1.1
1,192,024	-				+0.1
1,192,082	+				-0.4
1,192,130	+				-0.9
1,192,130	+				-1.2
1,192,130	+				+1.1
1,192,131	-				+0.3
1,192,134	+				-0.4
1,192,134	+				+0.5
1,192,135	-				+1.3
1,192,135	-				-0.4
1,192,137	+				+1.6
1,192,149	+				+0.8
1,192,149	+				+0.3
1,192,149	+				+0.5
1,192,149	+				+0.7
1,192,150	-				-1.8
1,192,178	+				+0.1
1,192,179	-				-1.6
1,192,198	+				+0.3
1,192,198	+				-1.2
1,192,198	+				-0.6
1,192,199	-				+0.3
1,192,252	+				-0.7
1,192,265	-				-1.6
1,192,265	-				-1.7
1,192,297	+				-1.1
1,192,297	+				+0.6
1,192,298	-				+0.7
1,192,311	+				-0.5
1,192,311	+				-0.5
1,192,363	+				+0.8
1,192,364	-				+0.4
1,192,364	-				+0.2
1,192,364	-				-0.1
1,192,367	-				+0.1
1,192,378	+				+0.0
1,192,379	-				-0.1
1,192,387	+				+0.1
1,192,408	-				-2.3
1,192,408	-				+0.6
1,192,592	+				+0.7
1,192,595	+				+0.8
1,192,626	+				-0.9
1,192,666	+				+2.2
1,192,698	+				-0.2
1,192,698	+				-0.1
1,192,776	-		Echvi_1031	0.12	+0.5