Strain Fitness in Escherichia coli BL21 around ECD_04137

Experiment: lambda1857_phage_12.5_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_04136 and ECD_04137 are separated by 322 nucleotides ECD_04136: ECD_04136 - putative integrase, at 4,408,343 to 4,409,533 _04136 ECD_04137: ECD_04137 - hypothetical protein, at 4,409,856 to 4,410,191 _04137 Position (kb) 4409 4410 4411Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 4408.906 kb on + strand, within ECD_04136at 4408.907 kb on - strand, within ECD_04136at 4408.914 kb on + strand, within ECD_04136at 4408.918 kb on + strand, within ECD_04136at 4408.918 kb on + strand, within ECD_04136at 4408.918 kb on + strand, within ECD_04136at 4408.918 kb on + strand, within ECD_04136at 4408.918 kb on + strand, within ECD_04136at 4408.919 kb on - strand, within ECD_04136at 4408.919 kb on - strand, within ECD_04136at 4408.919 kb on - strand, within ECD_04136at 4408.919 kb on - strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.922 kb on + strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.923 kb on - strand, within ECD_04136at 4408.924 kb on + strand, within ECD_04136at 4408.931 kb on - strand, within ECD_04136at 4408.931 kb on - strand, within ECD_04136at 4408.954 kb on - strand, within ECD_04136at 4408.975 kb on + strand, within ECD_04136at 4409.032 kb on + strand, within ECD_04136at 4409.032 kb on + strand, within ECD_04136at 4409.116 kb on - strand, within ECD_04136at 4409.240 kb on - strand, within ECD_04136at 4409.443 kb on - strandat 4409.870 kb on + strandat 4409.903 kb on + strand, within ECD_04137at 4409.904 kb on - strand, within ECD_04137at 4410.060 kb on + strand, within ECD_04137at 4410.095 kb on - strand, within ECD_04137at 4410.169 kb on + strandat 4410.207 kb on - strandat 4410.256 kb on + strandat 4410.256 kb on + strandat 4410.256 kb on + strandat 4410.289 kb on + strandat 4410.290 kb on - strandat 4410.290 kb on - strandat 4410.308 kb on + strandat 4410.309 kb on - strandat 4410.309 kb on - strandat 4410.482 kb on + strandat 4410.483 kb on - strandat 4410.608 kb on - strandat 4410.608 kb on - strandat 4410.638 kb on + strandat 4410.656 kb on + strandat 4410.656 kb on + strandat 4410.658 kb on + strandat 4410.722 kb on - strandat 4410.722 kb on - strandat 4410.722 kb on - strandat 4410.722 kb on - strandat 4410.722 kb on - strandat 4410.731 kb on + strandat 4410.731 kb on + strandat 4410.731 kb on + strandat 4410.731 kb on + strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.732 kb on - strandat 4410.733 kb on + strandat 4410.734 kb on - strandat 4410.734 kb on - strandat 4410.734 kb on - strandat 4410.765 kb on - strandat 4410.773 kb on + strandat 4410.778 kb on + strandat 4410.779 kb on - strandat 4410.780 kb on + strandat 4410.780 kb on + strandat 4410.854 kb on + strandat 4410.912 kb on - strandat 4410.921 kb on - strandat 4410.923 kb on + strandat 4410.923 kb on + strandat 4410.923 kb on + strandat 4410.924 kb on - strandat 4410.924 kb on - strandat 4410.925 kb on - strandat 4410.949 kb on + strandat 4411.142 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI
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4,408,906 + ECD_04136 0.47 +2.1
4,408,907 - ECD_04136 0.47 +1.7
4,408,914 + ECD_04136 0.48 +0.7
4,408,918 + ECD_04136 0.48 +1.7
4,408,918 + ECD_04136 0.48 -1.9
4,408,918 + ECD_04136 0.48 +0.0
4,408,918 + ECD_04136 0.48 -0.9
4,408,918 + ECD_04136 0.48 +0.5
4,408,919 - ECD_04136 0.48 +0.1
4,408,919 - ECD_04136 0.48 +0.2
4,408,919 - ECD_04136 0.48 -0.4
4,408,919 - ECD_04136 0.48 -1.3
4,408,922 + ECD_04136 0.49 -0.4
4,408,922 + ECD_04136 0.49 -1.5
4,408,922 + ECD_04136 0.49 -0.1
4,408,922 + ECD_04136 0.49 -0.4
4,408,922 + ECD_04136 0.49 -1.2
4,408,922 + ECD_04136 0.49 -1.2
4,408,922 + ECD_04136 0.49 -2.1
4,408,922 + ECD_04136 0.49 +1.1
4,408,923 - ECD_04136 0.49 +0.2
4,408,923 - ECD_04136 0.49 -2.1
4,408,923 - ECD_04136 0.49 +1.5
4,408,923 - ECD_04136 0.49 -1.0
4,408,923 - ECD_04136 0.49 +0.7
4,408,923 - ECD_04136 0.49 +0.4
4,408,923 - ECD_04136 0.49 +0.7
4,408,923 - ECD_04136 0.49 +0.1
4,408,924 + ECD_04136 0.49 +2.5
4,408,931 - ECD_04136 0.49 -0.0
4,408,931 - ECD_04136 0.49 -0.0
4,408,954 - ECD_04136 0.51 -1.9
4,408,975 + ECD_04136 0.53 +0.4
4,409,032 + ECD_04136 0.58 -0.6
4,409,032 + ECD_04136 0.58 -0.5
4,409,116 - ECD_04136 0.65 +0.5
4,409,240 - ECD_04136 0.75 +1.3
4,409,443 - +1.0
4,409,870 + -0.5
4,409,903 + ECD_04137 0.14 -0.1
4,409,904 - ECD_04137 0.14 -1.3
4,410,060 + ECD_04137 0.61 -0.5
4,410,095 - ECD_04137 0.71 -0.5
4,410,169 + +0.5
4,410,207 - +1.0
4,410,256 + +1.1
4,410,256 + -0.7
4,410,256 + +1.1
4,410,289 + +0.0
4,410,290 - +0.1
4,410,290 - +0.7
4,410,308 + -1.6
4,410,309 - -0.3
4,410,309 - -0.0
4,410,482 + +1.3
4,410,483 - -0.4
4,410,608 - -1.6
4,410,608 - -1.3
4,410,638 + -0.5
4,410,656 + +0.1
4,410,656 + +0.1
4,410,658 + -1.0
4,410,722 - +0.8
4,410,722 - +0.4
4,410,722 - -0.1
4,410,722 - +2.3
4,410,722 - -2.2
4,410,731 + +1.6
4,410,731 + +1.3
4,410,731 + +0.1
4,410,731 + +1.6
4,410,732 - +0.2
4,410,732 - +2.5
4,410,732 - -1.3
4,410,732 - +0.6
4,410,732 - +1.4
4,410,732 - -0.2
4,410,732 - +0.4
4,410,732 - +1.1
4,410,733 + +1.3
4,410,734 - -0.5
4,410,734 - -2.4
4,410,734 - -2.3
4,410,765 - -2.2
4,410,773 + -0.9
4,410,778 + +1.0
4,410,779 - -3.1
4,410,780 + -0.5
4,410,780 + +0.9
4,410,854 + -0.4
4,410,912 - +1.8
4,410,921 - -1.6
4,410,923 + +0.3
4,410,923 + +0.2
4,410,923 + -2.6
4,410,924 - +0.2
4,410,924 - +0.7
4,410,925 - +0.4
4,410,949 + +2.5
4,411,142 - -0.5

Or see this region's nucleotide sequence