Experiment: lambda1857_phage_12.5_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_04283 and ECD_02691 are separated by 622 nucleotides ECD_02691 and ECD_02692 are separated by 286 nucleotides
ECD_04283: ECD_04283 - IS150 putative transposase, at 2,821,542 to 2,822,393
_04283
ECD_02691: ECD_02691 - hexuronate isomerase, at 2,823,016 to 2,823,852
_02691
ECD_02692: ECD_02692 - short chain acyltransferase, at 2,824,139 to 2,825,320
_02692
Position (kb)
2823
2824 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3
4 at 2822.438 kb on - strand at 2822.443 kb on + strand at 2822.443 kb on + strand at 2822.444 kb on - strand at 2822.455 kb on + strand at 2822.513 kb on - strand at 2822.514 kb on + strand at 2822.515 kb on - strand at 2822.515 kb on - strand at 2822.515 kb on - strand at 2822.566 kb on + strand at 2822.627 kb on + strand at 2822.731 kb on + strand at 2822.732 kb on - strand at 2822.732 kb on - strand at 2822.773 kb on + strand at 2822.866 kb on + strand at 2822.992 kb on + strand at 2822.992 kb on + strand at 2823.088 kb on - strand at 2823.093 kb on + strand at 2823.093 kb on + strand at 2823.093 kb on + strand at 2823.094 kb on - strand at 2823.094 kb on - strand at 2823.094 kb on - strand at 2823.094 kb on - strand at 2823.095 kb on + strand at 2823.095 kb on + strand at 2823.095 kb on + strand at 2823.096 kb on - strand at 2823.096 kb on - strand at 2823.157 kb on - strand, within ECD_02691 at 2823.234 kb on - strand, within ECD_02691 at 2823.234 kb on - strand, within ECD_02691 at 2823.240 kb on - strand, within ECD_02691 at 2823.341 kb on - strand, within ECD_02691 at 2823.356 kb on + strand, within ECD_02691 at 2823.357 kb on - strand, within ECD_02691 at 2823.412 kb on + strand, within ECD_02691 at 2823.412 kb on + strand, within ECD_02691 at 2823.412 kb on + strand, within ECD_02691 at 2823.412 kb on + strand, within ECD_02691 at 2823.444 kb on - strand, within ECD_02691 at 2823.444 kb on - strand, within ECD_02691 at 2823.444 kb on - strand, within ECD_02691 at 2823.444 kb on - strand, within ECD_02691 at 2823.539 kb on + strand, within ECD_02691 at 2823.539 kb on + strand, within ECD_02691 at 2823.539 kb on + strand, within ECD_02691 at 2823.539 kb on + strand, within ECD_02691 at 2823.540 kb on - strand, within ECD_02691 at 2823.540 kb on - strand, within ECD_02691 at 2823.566 kb on + strand, within ECD_02691 at 2823.585 kb on + strand, within ECD_02691 at 2823.586 kb on - strand, within ECD_02691 at 2823.641 kb on + strand, within ECD_02691 at 2823.641 kb on + strand, within ECD_02691 at 2823.641 kb on + strand, within ECD_02691 at 2823.642 kb on - strand, within ECD_02691 at 2823.642 kb on - strand, within ECD_02691 at 2823.647 kb on - strand, within ECD_02691 at 2823.647 kb on - strand, within ECD_02691 at 2823.691 kb on - strand, within ECD_02691 at 2823.691 kb on - strand, within ECD_02691 at 2823.691 kb on - strand, within ECD_02691 at 2823.702 kb on + strand, within ECD_02691 at 2823.718 kb on - strand, within ECD_02691 at 2823.718 kb on - strand, within ECD_02691 at 2823.737 kb on + strand, within ECD_02691 at 2823.750 kb on - strand, within ECD_02691 at 2823.750 kb on - strand, within ECD_02691 at 2823.844 kb on + strand at 2823.844 kb on + strand at 2823.844 kb on + strand at 2823.934 kb on - strand at 2823.934 kb on - strand at 2823.934 kb on - strand at 2823.934 kb on - strand at 2823.934 kb on - strand at 2824.023 kb on + strand at 2824.023 kb on + strand at 2824.023 kb on + strand at 2824.023 kb on + strand at 2824.024 kb on - strand at 2824.063 kb on + strand at 2824.063 kb on + strand at 2824.063 kb on + strand at 2824.064 kb on - strand at 2824.086 kb on + strand at 2824.098 kb on + strand at 2824.140 kb on + strand at 2824.141 kb on - strand at 2824.141 kb on - strand at 2824.141 kb on - strand at 2824.216 kb on + strand at 2824.217 kb on - strand at 2824.217 kb on - strand at 2824.440 kb on + strand, within ECD_02692 at 2824.441 kb on - strand, within ECD_02692 at 2824.472 kb on + strand, within ECD_02692 at 2824.473 kb on - strand, within ECD_02692 at 2824.575 kb on - strand, within ECD_02692 at 2824.702 kb on + strand, within ECD_02692 at 2824.703 kb on - strand, within ECD_02692 at 2824.780 kb on + strand, within ECD_02692 at 2824.788 kb on + strand, within ECD_02692 at 2824.852 kb on + strand, within ECD_02692 at 2824.852 kb on + strand, within ECD_02692
Per-strain Table
Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI remove 2,822,438 - +0.2 2,822,443 + +0.5 2,822,443 + -0.2 2,822,444 - -1.1 2,822,455 + -2.1 2,822,513 - +1.3 2,822,514 + -0.6 2,822,515 - -3.9 2,822,515 - +0.3 2,822,515 - +0.8 2,822,566 + -1.2 2,822,627 + -0.3 2,822,731 + +0.9 2,822,732 - +1.9 2,822,732 - +0.2 2,822,773 + -0.3 2,822,866 + -0.5 2,822,992 + -0.8 2,822,992 + +0.6 2,823,088 - +0.9 2,823,093 + +1.2 2,823,093 + -2.4 2,823,093 + +1.9 2,823,094 - -1.0 2,823,094 - +0.7 2,823,094 - -2.1 2,823,094 - -2.2 2,823,095 + -1.5 2,823,095 + +0.5 2,823,095 + -2.8 2,823,096 - +0.9 2,823,096 - +0.4 2,823,157 - ECD_02691 0.17 -1.1 2,823,234 - ECD_02691 0.26 +1.4 2,823,234 - ECD_02691 0.26 -0.4 2,823,240 - ECD_02691 0.27 -1.6 2,823,341 - ECD_02691 0.39 -2.0 2,823,356 + ECD_02691 0.41 -1.6 2,823,357 - ECD_02691 0.41 -0.7 2,823,412 + ECD_02691 0.47 +2.5 2,823,412 + ECD_02691 0.47 +0.0 2,823,412 + ECD_02691 0.47 +4.2 2,823,412 + ECD_02691 0.47 -1.0 2,823,444 - ECD_02691 0.51 -0.7 2,823,444 - ECD_02691 0.51 +1.1 2,823,444 - ECD_02691 0.51 -1.1 2,823,444 - ECD_02691 0.51 -1.4 2,823,539 + ECD_02691 0.62 -1.5 2,823,539 + ECD_02691 0.62 +0.9 2,823,539 + ECD_02691 0.62 -0.6 2,823,539 + ECD_02691 0.62 +0.4 2,823,540 - ECD_02691 0.63 +1.0 2,823,540 - ECD_02691 0.63 -3.1 2,823,566 + ECD_02691 0.66 +0.4 2,823,585 + ECD_02691 0.68 -2.7 2,823,586 - ECD_02691 0.68 -0.4 2,823,641 + ECD_02691 0.75 +0.1 2,823,641 + ECD_02691 0.75 -1.9 2,823,641 + ECD_02691 0.75 -1.2 2,823,642 - ECD_02691 0.75 +0.2 2,823,642 - ECD_02691 0.75 +1.9 2,823,647 - ECD_02691 0.75 +0.2 2,823,647 - ECD_02691 0.75 +0.9 2,823,691 - ECD_02691 0.81 -2.8 2,823,691 - ECD_02691 0.81 -2.7 2,823,691 - ECD_02691 0.81 +0.8 2,823,702 + ECD_02691 0.82 -2.3 2,823,718 - ECD_02691 0.84 -0.2 2,823,718 - ECD_02691 0.84 +0.7 2,823,737 + ECD_02691 0.86 +0.1 2,823,750 - ECD_02691 0.88 -1.9 2,823,750 - ECD_02691 0.88 -2.1 2,823,844 + -0.8 2,823,844 + -1.0 2,823,844 + +0.6 2,823,934 - +0.7 2,823,934 - -0.9 2,823,934 - -1.3 2,823,934 - +0.8 2,823,934 - +0.9 2,824,023 + +0.1 2,824,023 + +0.5 2,824,023 + -3.1 2,824,023 + -0.4 2,824,024 - +0.8 2,824,063 + -0.6 2,824,063 + -0.2 2,824,063 + -1.6 2,824,064 - +1.1 2,824,086 + +0.1 2,824,098 + -1.6 2,824,140 + -3.0 2,824,141 - -1.5 2,824,141 - +1.4 2,824,141 - -1.3 2,824,216 + -2.5 2,824,217 - -0.1 2,824,217 - -1.0 2,824,440 + ECD_02692 0.25 -1.4 2,824,441 - ECD_02692 0.26 -1.2 2,824,472 + ECD_02692 0.28 -1.3 2,824,473 - ECD_02692 0.28 -0.5 2,824,575 - ECD_02692 0.37 -1.6 2,824,702 + ECD_02692 0.48 -1.9 2,824,703 - ECD_02692 0.48 -0.9 2,824,780 + ECD_02692 0.54 -2.0 2,824,788 + ECD_02692 0.55 -1.1 2,824,852 + ECD_02692 0.60 -2.5 2,824,852 + ECD_02692 0.60 -1.2
Or see this region's nucleotide sequence