Experiment: lambda1857_phage_12.5_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02520 and ECD_02521 are separated by 0 nucleotides ECD_02521 and ECD_02522 are separated by 83 nucleotides ECD_02522 and ECD_02523 are separated by 182 nucleotides ECD_02523 and ECD_02524 are separated by 9 nucleotides ECD_02524 and ECD_02525 are separated by 46 nucleotides
ECD_02520: ECD_02520 - transcriptional repressor of csiD, at 2,635,534 to 2,636,196
_02520
ECD_02521: ECD_02521 - uncharacterized protein, at 2,636,197 to 2,636,646
_02521
ECD_02522: ECD_02522 - cyaR sRNA-regulated protein, at 2,636,730 to 2,636,888
_02522
ECD_02523: ECD_02523 - tributyltin-inducible repressor of ygaVP, at 2,637,071 to 2,637,370
_02523
ECD_02524: ECD_02524 - DUF2892 family inner membrane rhodanese, at 2,637,380 to 2,637,904
_02524
ECD_02525: ECD_02525 - DNA binding protein, nucleoid-associated, at 2,637,951 to 2,638,355
_02525
Position (kb)
2637
2638 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 2636.116 kb on - strand, within ECD_02520 at 2636.151 kb on - strand at 2636.195 kb on - strand at 2636.195 kb on - strand at 2636.195 kb on - strand at 2636.195 kb on - strand at 2636.199 kb on - strand at 2636.199 kb on - strand at 2636.263 kb on - strand, within ECD_02521 at 2636.280 kb on + strand, within ECD_02521 at 2636.285 kb on + strand, within ECD_02521 at 2636.285 kb on + strand, within ECD_02521 at 2636.285 kb on + strand, within ECD_02521 at 2636.285 kb on + strand, within ECD_02521 at 2636.286 kb on - strand, within ECD_02521 at 2636.349 kb on + strand, within ECD_02521 at 2636.351 kb on + strand, within ECD_02521 at 2636.352 kb on - strand, within ECD_02521 at 2636.419 kb on - strand, within ECD_02521 at 2636.419 kb on - strand, within ECD_02521 at 2636.593 kb on - strand, within ECD_02521 at 2636.593 kb on - strand, within ECD_02521 at 2636.646 kb on + strand at 2636.646 kb on + strand at 2636.646 kb on + strand at 2636.646 kb on + strand at 2636.646 kb on + strand at 2636.647 kb on - strand at 2636.647 kb on - strand at 2636.647 kb on - strand at 2636.650 kb on + strand at 2636.650 kb on + strand at 2636.650 kb on + strand at 2636.650 kb on + strand at 2636.650 kb on + strand at 2636.651 kb on - strand at 2636.651 kb on - strand at 2636.651 kb on - strand at 2636.651 kb on - strand at 2636.684 kb on + strand at 2636.684 kb on + strand at 2636.684 kb on + strand at 2636.685 kb on - strand at 2636.685 kb on - strand at 2636.685 kb on - strand at 2636.732 kb on - strand at 2636.732 kb on - strand at 2636.732 kb on - strand at 2636.775 kb on - strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.776 kb on + strand, within ECD_02522 at 2636.777 kb on - strand, within ECD_02522 at 2636.777 kb on - strand, within ECD_02522 at 2636.777 kb on - strand, within ECD_02522 at 2636.798 kb on + strand, within ECD_02522 at 2636.798 kb on + strand, within ECD_02522 at 2636.798 kb on + strand, within ECD_02522 at 2636.799 kb on - strand, within ECD_02522 at 2636.799 kb on - strand, within ECD_02522 at 2636.804 kb on + strand, within ECD_02522 at 2636.889 kb on - strand at 2636.893 kb on - strand at 2636.989 kb on - strand at 2636.998 kb on + strand at 2636.998 kb on + strand at 2636.999 kb on - strand at 2637.015 kb on + strand at 2637.016 kb on - strand at 2637.016 kb on - strand at 2637.017 kb on + strand at 2637.017 kb on + strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.018 kb on - strand at 2637.090 kb on + strand at 2637.090 kb on + strand at 2637.090 kb on + strand at 2637.120 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.253 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.303 kb on + strand, within ECD_02523 at 2637.305 kb on + strand, within ECD_02523 at 2637.359 kb on + strand at 2637.359 kb on + strand at 2637.359 kb on + strand at 2637.562 kb on - strand, within ECD_02524 at 2637.562 kb on - strand, within ECD_02524 at 2637.592 kb on + strand, within ECD_02524 at 2637.776 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.804 kb on + strand, within ECD_02524 at 2637.873 kb on + strand at 2637.873 kb on + strand at 2637.874 kb on - strand at 2637.874 kb on - strand at 2637.878 kb on - strand at 2637.952 kb on + strand at 2637.952 kb on + strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.953 kb on - strand at 2637.978 kb on - strand at 2638.122 kb on - strand, within ECD_02525 at 2638.125 kb on - strand, within ECD_02525 at 2638.132 kb on - strand, within ECD_02525
Per-strain Table
Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI remove 2,636,116 - ECD_02520 0.88 -0.2 2,636,151 - +0.1 2,636,195 - -2.4 2,636,195 - +1.2 2,636,195 - -2.2 2,636,195 - -1.5 2,636,199 - +1.0 2,636,199 - +0.7 2,636,263 - ECD_02521 0.15 +0.9 2,636,280 + ECD_02521 0.18 +0.1 2,636,285 + ECD_02521 0.20 -2.5 2,636,285 + ECD_02521 0.20 -2.4 2,636,285 + ECD_02521 0.20 +1.0 2,636,285 + ECD_02521 0.20 +0.0 2,636,286 - ECD_02521 0.20 +0.3 2,636,349 + ECD_02521 0.34 -0.3 2,636,351 + ECD_02521 0.34 +0.7 2,636,352 - ECD_02521 0.34 -2.8 2,636,419 - ECD_02521 0.49 +2.2 2,636,419 - ECD_02521 0.49 -1.2 2,636,593 - ECD_02521 0.88 -1.9 2,636,593 - ECD_02521 0.88 -0.8 2,636,646 + +1.9 2,636,646 + +0.3 2,636,646 + +0.9 2,636,646 + -2.6 2,636,646 + -2.0 2,636,647 - -2.7 2,636,647 - +0.5 2,636,647 - +0.5 2,636,650 + -2.9 2,636,650 + -1.1 2,636,650 + +2.1 2,636,650 + +0.0 2,636,650 + -0.5 2,636,651 - +0.5 2,636,651 - -2.1 2,636,651 - +1.6 2,636,651 - +0.9 2,636,684 + +0.8 2,636,684 + -1.5 2,636,684 + -2.5 2,636,685 - -0.1 2,636,685 - -2.0 2,636,685 - -1.1 2,636,732 - +0.2 2,636,732 - +1.3 2,636,732 - +0.5 2,636,775 - ECD_02522 0.28 +0.5 2,636,776 + ECD_02522 0.29 +1.3 2,636,776 + ECD_02522 0.29 -0.3 2,636,776 + ECD_02522 0.29 +0.2 2,636,776 + ECD_02522 0.29 -1.6 2,636,776 + ECD_02522 0.29 -1.5 2,636,776 + ECD_02522 0.29 +1.1 2,636,777 - ECD_02522 0.30 +1.0 2,636,777 - ECD_02522 0.30 -0.8 2,636,777 - ECD_02522 0.30 +0.7 2,636,798 + ECD_02522 0.43 -0.0 2,636,798 + ECD_02522 0.43 -0.9 2,636,798 + ECD_02522 0.43 +2.2 2,636,799 - ECD_02522 0.43 -1.8 2,636,799 - ECD_02522 0.43 -2.3 2,636,804 + ECD_02522 0.47 -3.1 2,636,889 - +0.9 2,636,893 - +2.1 2,636,989 - -0.4 2,636,998 + -0.1 2,636,998 + +0.3 2,636,999 - -0.0 2,637,015 + -0.2 2,637,016 - +0.7 2,637,016 - -0.9 2,637,017 + -3.3 2,637,017 + +0.0 2,637,018 - +0.5 2,637,018 - +1.3 2,637,018 - +0.2 2,637,018 - +0.2 2,637,018 - +2.4 2,637,018 - +2.7 2,637,018 - -1.5 2,637,018 - -0.6 2,637,018 - +0.3 2,637,018 - +1.2 2,637,018 - +1.8 2,637,018 - +1.5 2,637,018 - +2.1 2,637,018 - +1.7 2,637,090 + -1.7 2,637,090 + -3.3 2,637,090 + -0.6 2,637,120 + ECD_02523 0.16 +0.2 2,637,253 + ECD_02523 0.61 -2.0 2,637,253 + ECD_02523 0.61 -1.2 2,637,253 + ECD_02523 0.61 -3.8 2,637,303 + ECD_02523 0.77 -1.1 2,637,303 + ECD_02523 0.77 +0.1 2,637,303 + ECD_02523 0.77 -0.5 2,637,303 + ECD_02523 0.77 -3.1 2,637,305 + ECD_02523 0.78 +2.0 2,637,359 + -0.6 2,637,359 + -1.9 2,637,359 + +0.1 2,637,562 - ECD_02524 0.35 -1.0 2,637,562 - ECD_02524 0.35 -1.6 2,637,592 + ECD_02524 0.40 -2.1 2,637,776 + ECD_02524 0.75 +0.7 2,637,804 + ECD_02524 0.81 +0.4 2,637,804 + ECD_02524 0.81 +0.1 2,637,804 + ECD_02524 0.81 -0.7 2,637,873 + -1.0 2,637,873 + -0.8 2,637,874 - +0.1 2,637,874 - +0.2 2,637,878 - -1.3 2,637,952 + -0.2 2,637,952 + +1.9 2,637,953 - -0.6 2,637,953 - +1.5 2,637,953 - +0.3 2,637,953 - +0.4 2,637,978 - +0.1 2,638,122 - ECD_02525 0.42 +0.3 2,638,125 - ECD_02525 0.43 +0.4 2,638,132 - ECD_02525 0.45 +0.5
Or see this region's nucleotide sequence