Experiment: lambda1857_phage_12.5_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_02245 and ECD_02246 are separated by 98 nucleotides ECD_02246 and ECD_02247 overlap by 4 nucleotides
ECD_02245: ECD_02245 - erythronate-4-phosphate dehydrogenase, at 2,323,968 to 2,325,104
_02245
ECD_02246: ECD_02246 - putative flagella assembly protein, at 2,325,203 to 2,326,198
_02246
ECD_02247: ECD_02247 - putative arabinose efflux transporter, at 2,326,195 to 2,327,373
_02247
Position (kb)
2325
2326
2327 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2324.273 kb on + strand, within ECD_02245 at 2324.283 kb on - strand, within ECD_02245 at 2324.425 kb on - strand, within ECD_02245 at 2324.761 kb on + strand, within ECD_02245 at 2324.762 kb on - strand, within ECD_02245 at 2324.813 kb on - strand, within ECD_02245 at 2324.835 kb on - strand, within ECD_02245 at 2324.927 kb on + strand, within ECD_02245 at 2325.061 kb on - strand at 2325.061 kb on - strand at 2325.081 kb on - strand at 2325.119 kb on + strand at 2325.171 kb on - strand at 2325.191 kb on + strand at 2325.192 kb on - strand at 2325.197 kb on + strand at 2325.197 kb on + strand at 2325.197 kb on + strand at 2325.198 kb on - strand at 2325.207 kb on + strand at 2325.304 kb on + strand, within ECD_02246 at 2325.446 kb on - strand, within ECD_02246 at 2325.519 kb on - strand, within ECD_02246 at 2325.557 kb on + strand, within ECD_02246 at 2325.612 kb on + strand, within ECD_02246 at 2325.873 kb on + strand, within ECD_02246 at 2325.931 kb on - strand, within ECD_02246 at 2325.963 kb on - strand, within ECD_02246 at 2325.963 kb on - strand, within ECD_02246 at 2325.965 kb on - strand, within ECD_02246 at 2325.965 kb on - strand, within ECD_02246 at 2326.040 kb on + strand, within ECD_02246 at 2326.091 kb on - strand, within ECD_02246 at 2326.216 kb on + strand at 2326.228 kb on - strand at 2326.228 kb on - strand at 2326.420 kb on - strand, within ECD_02247 at 2326.694 kb on - strand, within ECD_02247 at 2326.817 kb on - strand, within ECD_02247 at 2326.817 kb on - strand, within ECD_02247 at 2326.858 kb on - strand, within ECD_02247 at 2327.107 kb on + strand, within ECD_02247 at 2327.107 kb on + strand, within ECD_02247 at 2327.108 kb on - strand, within ECD_02247
Per-strain Table
Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI remove 2,324,273 + ECD_02245 0.27 +1.2 2,324,283 - ECD_02245 0.28 +0.0 2,324,425 - ECD_02245 0.40 -0.4 2,324,761 + ECD_02245 0.70 -1.2 2,324,762 - ECD_02245 0.70 +2.2 2,324,813 - ECD_02245 0.74 +2.0 2,324,835 - ECD_02245 0.76 +1.1 2,324,927 + ECD_02245 0.84 +2.5 2,325,061 - +3.4 2,325,061 - -0.0 2,325,081 - -0.0 2,325,119 + +0.6 2,325,171 - -0.3 2,325,191 + +2.3 2,325,192 - +0.5 2,325,197 + +0.4 2,325,197 + +1.5 2,325,197 + +0.5 2,325,198 - -0.2 2,325,207 + +0.7 2,325,304 + ECD_02246 0.10 -0.0 2,325,446 - ECD_02246 0.24 -0.1 2,325,519 - ECD_02246 0.32 +0.6 2,325,557 + ECD_02246 0.36 -2.1 2,325,612 + ECD_02246 0.41 +0.4 2,325,873 + ECD_02246 0.67 +0.7 2,325,931 - ECD_02246 0.73 +0.6 2,325,963 - ECD_02246 0.76 -0.1 2,325,963 - ECD_02246 0.76 -0.0 2,325,965 - ECD_02246 0.77 -0.2 2,325,965 - ECD_02246 0.77 +0.2 2,326,040 + ECD_02246 0.84 -1.7 2,326,091 - ECD_02246 0.89 -0.2 2,326,216 + -0.8 2,326,228 - -0.4 2,326,228 - +0.6 2,326,420 - ECD_02247 0.19 -2.4 2,326,694 - ECD_02247 0.42 +0.9 2,326,817 - ECD_02247 0.53 +0.5 2,326,817 - ECD_02247 0.53 -1.8 2,326,858 - ECD_02247 0.56 +0.5 2,327,107 + ECD_02247 0.77 -1.7 2,327,107 + ECD_02247 0.77 -2.5 2,327,108 - ECD_02247 0.77 +1.4
Or see this region's nucleotide sequence