Strain Fitness in Escherichia coli BL21 around ECD_01740

Experiment: lambda1857_phage_12.5_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01739 and ECD_01740 are separated by 136 nucleotidesECD_01740 and ECD_01741 are separated by 9 nucleotidesECD_01741 and ECD_01742 are separated by 4 nucleotides ECD_01739: ECD_01739 - putative DNA-binding transcriptional regulator, at 1,798,473 to 1,799,231 _01739 ECD_01740: ECD_01740 - methylglyoxal reductase, NADH-dependent, at 1,799,368 to 1,800,348 _01740 ECD_01741: ECD_01741 - putative kinase, at 1,800,358 to 1,801,305 _01741 ECD_01742: ECD_01742 - putative aldolase, at 1,801,310 to 1,802,146 _01742 Position (kb) 1799 1800 1801Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1798.602 kb on - strand, within ECD_01739at 1798.764 kb on - strand, within ECD_01739at 1799.003 kb on - strand, within ECD_01739at 1799.495 kb on - strand, within ECD_01740at 1800.332 kb on - strandat 1800.494 kb on - strand, within ECD_01741

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Per-strain Table

Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI
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1,798,602 - ECD_01739 0.17 +2.9
1,798,764 - ECD_01739 0.38 +0.1
1,799,003 - ECD_01739 0.70 +0.6
1,799,495 - ECD_01740 0.13 +0.6
1,800,332 - -2.3
1,800,494 - ECD_01741 0.14 +0.9

Or see this region's nucleotide sequence