Strain Fitness in Escherichia coli BL21 around ECD_01370

Experiment: lambda1857_phage_12.5_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_01369 and ECD_01370 are separated by 196 nucleotidesECD_01370 and ECD_01371 are separated by 41 nucleotides ECD_01369: ECD_01369 - DUF218 superfamily protein, SAM-binding, at 1,440,519 to 1,441,319 _01369 ECD_01370: ECD_01370 - aldehyde dehydrogenase A, NAD-linked, at 1,441,516 to 1,442,955 _01370 ECD_01371: ECD_01371 - glyceraldehyde-3-phosphate dehydrogenase, at 1,442,997 to 1,443,998 _01371 Position (kb) 1441 1442 1443Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1441.396 kb on - strandat 1441.539 kb on + strandat 1441.539 kb on + strandat 1441.544 kb on - strandat 1442.370 kb on + strand, within ECD_01370at 1442.389 kb on + strand, within ECD_01370at 1442.407 kb on + strand, within ECD_01370at 1442.821 kb on + strandat 1442.821 kb on + strandat 1442.874 kb on + strandat 1443.219 kb on - strand, within ECD_01371at 1443.462 kb on - strand, within ECD_01371

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Per-strain Table

Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI
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1,441,396 - +0.3
1,441,539 + -1.3
1,441,539 + -0.7
1,441,544 - +1.5
1,442,370 + ECD_01370 0.59 +1.1
1,442,389 + ECD_01370 0.61 -0.8
1,442,407 + ECD_01370 0.62 -1.3
1,442,821 + -3.0
1,442,821 + -1.8
1,442,874 + +3.1
1,443,219 - ECD_01371 0.22 -0.9
1,443,462 - ECD_01371 0.46 -1.2

Or see this region's nucleotide sequence