Strain Fitness in Escherichia coli BL21 around ECD_00905

Experiment: lambda1857_phage_12.5_MOI

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntECD_00904 and ECD_00905 are separated by 99 nucleotidesECD_00905 and ECD_00906 are separated by 81 nucleotides ECD_00904: ECD_00904 - LysR family putative transcriptional regulator, at 953,751 to 954,659 _00904 ECD_00905: ECD_00905 - putative NAD(P)H-dependent oxidoreductase, at 954,759 to 955,349 _00905 ECD_00906: ECD_00906 - pyruvate formate-lyase 1-activating enzyme; [formate-C-acetyltransferase 1]-activating enzyme; PFL activase, at 955,431 to 956,171 _00906 Position (kb) 954 955 956Strain fitness (log2 ratio) -2 -1 0 1 2at 953.833 kb on + strandat 953.833 kb on + strandat 953.833 kb on + strandat 953.833 kb on + strandat 954.165 kb on + strand, within ECD_00904at 954.545 kb on + strand, within ECD_00904at 954.753 kb on - strandat 954.821 kb on + strand, within ECD_00905at 955.345 kb on + strandat 956.266 kb on - strandat 956.269 kb on + strandat 956.270 kb on - strandat 956.270 kb on - strandat 956.270 kb on - strandat 956.270 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI
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953,833 + +1.6
953,833 + -1.0
953,833 + -0.2
953,833 + -1.0
954,165 + ECD_00904 0.46 -1.4
954,545 + ECD_00904 0.87 -1.7
954,753 - -0.4
954,821 + ECD_00905 0.10 +1.3
955,345 + +2.5
956,266 - -0.6
956,269 + -1.0
956,270 - +1.2
956,270 - +0.4
956,270 - +1.0
956,270 - -1.8

Or see this region's nucleotide sequence