Experiment: lambda1857_phage_12.5_MOI
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt ECD_00615 and ECD_00616 are separated by 59 nucleotides ECD_00616 and ECD_00617 are separated by 83 nucleotides
ECD_00615: ECD_00615 - J domain-containing HscC co-chaperone; Hsc56, at 638,089 to 639,228
_00615
ECD_00616: ECD_00616 - Hsp70 family chaperone Hsc62; RpoD-binding transcription inhibitor, at 639,288 to 640,958
_00616
ECD_00617: ECD_00617 - ribonucleoside hydrolase 1, at 641,042 to 641,977
_00617
Position (kb) 639
640
641 Strain fitness (log2 ratio) -2
-1
0
1
2 at 638.371 kb on + strand, within ECD_00615 at 638.453 kb on - strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.542 kb on + strand, within ECD_00615 at 638.625 kb on + strand, within ECD_00615 at 638.637 kb on + strand, within ECD_00615 at 638.688 kb on - strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.720 kb on + strand, within ECD_00615 at 638.746 kb on + strand, within ECD_00615 at 638.754 kb on + strand, within ECD_00615 at 638.949 kb on - strand, within ECD_00615 at 638.988 kb on + strand, within ECD_00615 at 638.991 kb on + strand, within ECD_00615 at 639.188 kb on + strand at 639.223 kb on - strand at 639.874 kb on + strand, within ECD_00616 at 640.258 kb on + strand, within ECD_00616 at 640.259 kb on - strand, within ECD_00616 at 640.259 kb on - strand, within ECD_00616 at 640.476 kb on - strand, within ECD_00616 at 640.666 kb on - strand, within ECD_00616 at 641.296 kb on + strand, within ECD_00617 at 641.476 kb on - strand, within ECD_00617 at 641.480 kb on - strand, within ECD_00617 at 641.518 kb on + strand, within ECD_00617 at 641.593 kb on + strand, within ECD_00617 at 641.841 kb on - strand, within ECD_00617 at 641.878 kb on + strand, within ECD_00617 at 641.879 kb on - strand, within ECD_00617 at 641.921 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction lambda1857_phage_12.5_MOI remove 638,371 + ECD_00615 0.25 -2.3 638,453 - ECD_00615 0.32 -1.6 638,542 + ECD_00615 0.40 -0.9 638,542 + ECD_00615 0.40 +0.3 638,542 + ECD_00615 0.40 +1.4 638,625 + ECD_00615 0.47 +1.6 638,637 + ECD_00615 0.48 +1.5 638,688 - ECD_00615 0.53 -2.6 638,720 + ECD_00615 0.55 -0.9 638,720 + ECD_00615 0.55 +1.0 638,720 + ECD_00615 0.55 +0.9 638,746 + ECD_00615 0.58 +0.8 638,754 + ECD_00615 0.58 +1.1 638,949 - ECD_00615 0.75 +0.5 638,988 + ECD_00615 0.79 +0.3 638,991 + ECD_00615 0.79 +2.5 639,188 + +2.7 639,223 - +0.3 639,874 + ECD_00616 0.35 -0.1 640,258 + ECD_00616 0.58 +0.6 640,259 - ECD_00616 0.58 +2.7 640,259 - ECD_00616 0.58 +0.7 640,476 - ECD_00616 0.71 +0.5 640,666 - ECD_00616 0.82 -1.1 641,296 + ECD_00617 0.27 +0.0 641,476 - ECD_00617 0.46 -0.1 641,480 - ECD_00617 0.47 -1.3 641,518 + ECD_00617 0.51 +1.0 641,593 + ECD_00617 0.59 -0.7 641,841 - ECD_00617 0.85 +2.0 641,878 + ECD_00617 0.89 +0.1 641,879 - ECD_00617 0.89 +1.6 641,921 + +1.3
Or see this region's nucleotide sequence