Strain Fitness in Escherichia coli BW25113 around b2618
Experiment: Dimethyl Sulfoxide 10 vol%
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Dimethyl Sulfoxide 10 vol% |
---|---|---|---|---|---|
remove | |||||
2,751,106 | - | recN | b2616 | 0.78 | -1.2 |
2,751,114 | + | recN | b2616 | 0.78 | -1.2 |
2,751,127 | + | recN | b2616 | 0.79 | +0.8 |
2,751,139 | + | recN | b2616 | 0.80 | +0.0 |
2,751,139 | + | recN | b2616 | 0.80 | +0.4 |
2,751,274 | - | recN | b2616 | 0.88 | -2.2 |
2,751,274 | - | recN | b2616 | 0.88 | +0.2 |
2,751,357 | - | -1.5 | |||
2,751,357 | - | -0.8 | |||
2,751,363 | + | +1.1 | |||
2,751,363 | + | -0.5 | |||
2,751,436 | + | +0.2 | |||
2,751,588 | + | +0.3 | |||
2,751,588 | + | -0.4 | |||
2,751,813 | - | smpA | b2617 | 0.54 | -0.7 |
2,751,840 | + | smpA | b2617 | 0.62 | +0.8 |
2,751,878 | + | smpA | b2617 | 0.73 | +0.8 |
2,751,888 | - | smpA | b2617 | 0.76 | -2.2 |
2,751,888 | - | smpA | b2617 | 0.76 | -0.8 |
2,751,941 | + | +1.2 | |||
2,752,081 | + | b2618 | b2618 | 0.18 | +0.6 |
2,752,081 | + | b2618 | b2618 | 0.18 | +0.2 |
2,752,092 | + | b2618 | b2618 | 0.21 | +2.1 |
2,752,118 | - | b2618 | b2618 | 0.30 | +0.3 |
2,752,150 | + | b2618 | b2618 | 0.41 | +0.1 |
2,752,822 | + | +0.3 | |||
2,752,851 | - | +0.1 | |||
2,752,936 | + | +1.8 | |||
2,753,096 | + | smpB | b2620 | 0.37 | -0.0 |
2,753,223 | - | smpB | b2620 | 0.63 | -1.0 |
2,753,223 | - | smpB | b2620 | 0.63 | -0.2 |
Or see this region's nucleotide sequence