Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_943

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
1,054,457	+		PfGW456L13_941	0.43	+0.1
1,054,457	+		PfGW456L13_941	0.43	+0.5
1,054,457	+		PfGW456L13_941	0.43	+0.6
1,054,457	+		PfGW456L13_941	0.43	-1.2
1,054,457	+		PfGW456L13_941	0.43	+0.0
1,054,457	+		PfGW456L13_941	0.43	+0.2
1,054,457	+		PfGW456L13_941	0.43	+1.7
1,054,457	+		PfGW456L13_941	0.43	-1.3
1,054,457	+		PfGW456L13_941	0.43	-0.3
1,054,457	+		PfGW456L13_941	0.43	-0.2
1,054,457	+		PfGW456L13_941	0.43	+0.6
1,054,458	-		PfGW456L13_941	0.43	-0.8
1,054,458	-		PfGW456L13_941	0.43	+1.3
1,054,458	-		PfGW456L13_941	0.43	+0.8
1,054,458	-		PfGW456L13_941	0.43	-1.4
1,054,458	-		PfGW456L13_941	0.43	+0.2
1,054,458	-		PfGW456L13_941	0.43	-0.6
1,054,504	+		PfGW456L13_941	0.51	-0.0
1,054,504	+		PfGW456L13_941	0.51	+0.3
1,054,504	+		PfGW456L13_941	0.51	-0.1
1,054,504	+		PfGW456L13_941	0.51	+0.1
1,054,504	+		PfGW456L13_941	0.51	-1.0
1,054,504	+		PfGW456L13_941	0.51	-1.3
1,054,504	+		PfGW456L13_941	0.51	+0.3
1,054,504	+		PfGW456L13_941	0.51	-0.1
1,054,505	-		PfGW456L13_941	0.51	+0.2
1,054,505	-		PfGW456L13_941	0.51	-0.3
1,054,505	-		PfGW456L13_941	0.51	+1.2
1,054,505	-		PfGW456L13_941	0.51	-0.2
1,054,505	-		PfGW456L13_941	0.51	-1.6
1,054,505	-		PfGW456L13_941	0.51	-1.6
1,054,505	-		PfGW456L13_941	0.51	-0.8
1,054,505	-		PfGW456L13_941	0.51	+0.7
1,054,505	-		PfGW456L13_941	0.51	+0.6
1,054,515	+		PfGW456L13_941	0.53	+0.3
1,054,515	+		PfGW456L13_941	0.53	+0.5
1,054,516	-		PfGW456L13_941	0.53	-0.1
1,054,526	+		PfGW456L13_941	0.55	+1.2
1,054,526	+		PfGW456L13_941	0.55	-0.5
1,054,527	-		PfGW456L13_941	0.55	+0.3
1,054,760	-				+0.8
1,054,809	+				-0.4
1,054,844	+				+0.5
1,054,845	-				+0.3
1,054,845	-				+1.6
1,054,845	-				-0.5
1,054,845	-				-0.1
1,054,938	+				+1.0
1,054,938	+				+0.0
1,054,938	+				-0.8
1,054,939	-				+0.4
1,054,939	-				-1.1
1,054,939	-				+1.9
1,055,115	+		PfGW456L13_942	0.44	-0.6
1,055,115	+		PfGW456L13_942	0.44	-0.4
1,055,115	+		PfGW456L13_942	0.44	+0.2
1,055,115	+		PfGW456L13_942	0.44	-0.2
1,055,116	-		PfGW456L13_942	0.45	-0.2
1,055,240	+		PfGW456L13_942	0.74	-1.4
1,055,347	+				-0.7
1,055,347	+				-0.5
1,055,347	+				+0.9
1,055,347	+				+0.7
1,055,347	+				-0.1
1,055,347	+				+0.3
1,055,347	+				-1.4
1,055,347	+				+0.4
1,055,348	-				+0.7
1,055,348	-				+0.4
1,055,348	-				+0.9
1,055,348	-				+0.1
1,055,348	-				-1.9
1,055,348	-				+0.2
1,055,348	-				-0.2
1,055,348	-				-0.0
1,055,355	+				-0.2
1,055,355	+				-0.3
1,055,356	-				+1.8
1,055,356	-				-1.1
1,055,356	-				+0.4
1,055,506	-				-3.3
1,055,506	-				-2.1
1,055,683	+		PfGW456L13_943	0.22	-1.6
1,055,683	+		PfGW456L13_943	0.22	-1.7
1,055,684	-		PfGW456L13_943	0.22	-1.8
1,055,684	-		PfGW456L13_943	0.22	-1.2
1,055,684	-		PfGW456L13_943	0.22	-0.9
1,055,684	-		PfGW456L13_943	0.22	-0.3
1,055,697	+		PfGW456L13_943	0.23	-0.3
1,055,697	+		PfGW456L13_943	0.23	-4.2
1,055,698	-		PfGW456L13_943	0.23	-1.8
1,055,698	-		PfGW456L13_943	0.23	-1.3
1,055,847	-		PfGW456L13_943	0.35	-2.9
1,056,059	+		PfGW456L13_943	0.53	-4.1
1,056,060	-		PfGW456L13_943	0.53	-1.3
1,056,102	+		PfGW456L13_943	0.56	-2.5
1,056,102	+		PfGW456L13_943	0.56	-1.3
1,056,108	+		PfGW456L13_943	0.57	-3.7
1,056,108	+		PfGW456L13_943	0.57	-4.1
1,056,108	+		PfGW456L13_943	0.57	-1.4
1,056,108	+		PfGW456L13_943	0.57	-3.4
1,056,109	-		PfGW456L13_943	0.57	-3.1
1,056,109	-		PfGW456L13_943	0.57	-2.8
1,056,152	-		PfGW456L13_943	0.60	-1.4
1,056,404	+		PfGW456L13_943	0.81	-1.0
1,056,532	-				-1.6
1,056,532	-				-0.6
1,056,532	-				-3.0
1,056,547	-				-3.0
1,056,646	+				-1.8
1,056,647	-				-2.9
1,056,647	-				-0.7
1,056,743	+				-3.9
1,056,759	+				-2.9
1,056,759	+				-4.1
1,056,760	-				-1.1
1,056,760	-				-0.8
1,056,764	+				-1.6
1,056,765	-				-0.7
1,056,765	-				-0.4
1,056,769	+				+0.0
1,056,769	+				-0.3
1,056,769	+				+0.7
1,056,769	+				+1.1
1,056,769	+				-1.4
1,056,769	+				+1.2
1,056,769	+				-0.2
1,056,769	+				+0.7
1,056,769	+				+0.1
1,056,769	+				-1.4
1,056,769	+				-0.3
1,056,769	+				+0.6
1,056,769	+				+0.4
1,056,769	+				+0.6
1,056,769	+				+0.2
1,056,769	+				-0.6
1,056,770	-				-0.1
1,056,770	-				-0.8
1,056,770	-				+0.1
1,056,770	-				+0.7
1,056,770	-				-0.1
1,056,770	-				+0.6
1,056,770	-				-0.5
1,056,770	-				-0.5
1,056,770	-				-1.2
1,056,770	-				+0.3
1,056,770	-				+0.9
1,056,770	-				+0.3
1,056,770	-				-0.2
1,056,770	-				+0.1
1,056,770	-				-0.0
1,056,770	-				+0.0
1,056,770	-				-0.2
1,056,770	-				-0.5
1,056,770	-				-0.2
1,056,770	-				-0.9
1,056,931	+				-0.8
1,057,013	+		PfGW456L13_944	0.13	+0.2
1,057,013	+		PfGW456L13_944	0.13	-0.8
1,057,013	-		PfGW456L13_944	0.13	-1.4
1,057,014	-		PfGW456L13_944	0.13	+0.9
1,057,014	-		PfGW456L13_944	0.13	+0.5
1,057,123	+		PfGW456L13_944	0.21	-0.3
1,057,123	+		PfGW456L13_944	0.21	-0.3
1,057,123	+		PfGW456L13_944	0.21	+0.3
1,057,123	+		PfGW456L13_944	0.21	-1.0
1,057,124	-		PfGW456L13_944	0.21	-0.7
1,057,124	-		PfGW456L13_944	0.21	-0.1
1,057,124	-		PfGW456L13_944	0.21	-0.3
1,057,124	-		PfGW456L13_944	0.21	-0.1
1,057,124	-		PfGW456L13_944	0.21	-0.4
1,057,124	-		PfGW456L13_944	0.21	-0.2
1,057,124	-		PfGW456L13_944	0.21	-0.3
1,057,124	-		PfGW456L13_944	0.21	-0.5
1,057,229	-		PfGW456L13_944	0.29	+0.7