Strain Fitness in Pseudomonas fluorescens GW456-L13 around PfGW456L13_1830

Experiment: casaminos (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	casaminos (C)
2,014,686	+		PfGW456L13_1829	0.39	+0.4
2,014,956	+		PfGW456L13_1829	0.63	-1.2
2,014,956	+		PfGW456L13_1829	0.63	+1.0
2,014,957	-		PfGW456L13_1829	0.64	-1.0
2,015,025	+		PfGW456L13_1829	0.70	+0.0
2,015,304	+				-0.1
2,015,304	+				+0.4
2,015,304	+				+0.8
2,015,305	-				-0.2
2,015,305	-				-0.2
2,015,305	-				+0.2
2,015,305	-				+0.3
2,015,335	-				-0.3
2,015,357	-				-0.2
2,015,386	+				+0.0
2,015,403	+				+0.6
2,015,403	+				-1.0
2,015,403	+				+1.1
2,015,403	+				-2.1
2,015,403	+				-0.0
2,015,403	+				-0.3
2,015,403	+				-0.4
2,015,403	+				-0.3
2,015,403	+				+0.2
2,015,403	+				-0.2
2,015,403	+				-0.8
2,015,404	-				+0.4
2,015,404	-				+0.1
2,015,404	-				-0.7
2,015,404	-				+0.0
2,015,404	-				+0.7
2,015,404	-				-0.9
2,015,404	-				-0.4
2,015,404	-				+1.5
2,015,404	-				-0.4
2,015,404	-				+0.8
2,015,404	-				+2.2
2,015,404	-				+0.4
2,015,404	-				-2.4
2,015,404	-				+0.7
2,015,405	+				-0.9
2,015,405	+				+0.4
2,015,405	+				-0.2
2,015,405	+				+0.8
2,015,406	-				+0.6
2,015,406	-				+0.6
2,015,406	-				-0.0
2,015,406	-				+0.4
2,015,414	+				+1.5
2,015,414	+				+0.3
2,015,414	+				-0.9
2,015,414	+				-0.3
2,015,414	+				-0.3
2,015,414	+				+0.2
2,015,414	+				-1.3
2,015,415	-				-0.3
2,015,415	-				+0.1
2,015,415	-				-1.1
2,015,415	-				-1.3
2,015,415	-				-0.8
2,015,415	-				+0.8
2,015,415	-				-0.0
2,015,415	-				+0.8
2,015,415	-				+0.1
2,015,415	-				-0.9
2,015,415	-				-0.5
2,015,415	-				-0.1
2,015,415	-				+1.1
2,015,415	-				-1.7
2,015,462	+				+0.2
2,015,462	+				-0.5
2,015,462	+				+0.6
2,015,463	-				+0.0
2,015,463	-				-0.5
2,015,521	+				+0.7
2,015,523	+				+0.4
2,015,523	+				+0.0
2,015,523	+				-1.6
2,015,523	+				-0.1
2,015,523	+				-0.0
2,015,523	+				+0.1
2,015,523	+				+0.0
2,015,523	+				-0.4
2,015,523	+				+0.7
2,015,523	+				-0.1
2,015,523	+				-0.8
2,015,523	+				-0.3
2,015,523	+				-1.2
2,015,523	+				-0.3
2,015,523	+				-0.3
2,015,523	+				-0.2
2,015,523	+				+1.7
2,015,523	+				+0.7
2,015,523	+				-1.3
2,015,523	+				+0.0
2,015,523	+				-0.3
2,015,523	+				-0.4
2,015,524	-				+0.3
2,015,524	-				+0.1
2,015,524	-				-0.3
2,015,524	-				+0.2
2,015,524	-				-1.1
2,015,524	-				-0.6
2,015,524	-				-0.1
2,015,524	-				-0.4
2,015,524	-				+0.8
2,015,524	-				+0.1
2,015,524	-				-0.1
2,015,524	-				+0.9
2,015,524	-				-1.1
2,015,524	-				+0.2
2,015,529	+				-0.8
2,015,529	+				-0.5
2,015,529	+				-0.0
2,015,529	+				-0.0
2,015,529	+				+0.6
2,015,529	+				+0.8
2,015,529	+				-1.2
2,015,529	+				-0.2
2,015,529	+				+0.2
2,015,529	+				+0.7
2,015,529	+				+0.4
2,015,530	-				-1.0
2,015,530	-				-0.5
2,015,530	-				-0.6
2,015,530	-				-0.5
2,015,530	-				-0.9
2,015,530	-				+1.6
2,015,530	-				+0.3
2,015,530	-				-0.3
2,015,530	-				-0.3
2,015,530	-				+0.0
2,015,575	+				+0.2
2,015,575	+				-0.3
2,015,575	+				+1.1
2,015,576	-				+0.1
2,015,576	-				-0.4
2,015,576	-				-1.0
2,015,576	-				-0.2
2,015,588	+				+0.7
2,015,588	+				+0.6
2,015,588	+				+0.8
2,015,588	+				+0.4
2,015,588	+				+0.2
2,015,589	-				+0.0
2,015,589	-				+0.7
2,015,589	-				-0.3
2,015,589	-				+0.4
2,015,589	-				-0.8
2,015,592	+				+0.6
2,015,592	+				-0.3
2,015,592	+				+0.7
2,015,592	+				+0.8
2,015,592	+				+0.1
2,015,592	+				+0.1
2,015,593	-				+0.2
2,016,101	+		PfGW456L13_1830	0.28	-0.2
2,016,102	-		PfGW456L13_1830	0.28	-1.2
2,016,171	-		PfGW456L13_1830	0.32	+0.6
2,016,661	+		PfGW456L13_1830	0.58	+0.8
2,016,694	+		PfGW456L13_1830	0.59	+0.5
2,016,694	+		PfGW456L13_1830	0.59	-0.0
2,016,694	+		PfGW456L13_1830	0.59	-0.4
2,016,695	-		PfGW456L13_1830	0.59	+1.1
2,016,695	-		PfGW456L13_1830	0.59	+0.5
2,016,695	-		PfGW456L13_1830	0.59	-0.0
2,016,695	-		PfGW456L13_1830	0.59	+0.1
2,016,849	+		PfGW456L13_1830	0.67	-0.6
2,016,850	-		PfGW456L13_1830	0.68	+1.4
2,016,850	-		PfGW456L13_1830	0.68	+0.2
2,016,850	-		PfGW456L13_1830	0.68	+1.4
2,017,031	+		PfGW456L13_1830	0.77	+0.5
2,017,031	+		PfGW456L13_1830	0.77	-0.4
2,017,032	-		PfGW456L13_1830	0.77	+1.4
2,017,032	-		PfGW456L13_1830	0.77	-0.2
2,017,032	-		PfGW456L13_1830	0.77	+0.3
2,017,032	-		PfGW456L13_1830	0.77	+0.7
2,017,032	-		PfGW456L13_1830	0.77	+0.8
2,017,033	+		PfGW456L13_1830	0.77	+0.8
2,017,033	+		PfGW456L13_1830	0.77	-2.4
2,017,033	+		PfGW456L13_1830	0.77	-0.6
2,017,033	+		PfGW456L13_1830	0.77	-1.5
2,017,033	+		PfGW456L13_1830	0.77	+0.5
2,017,033	+		PfGW456L13_1830	0.77	-0.3
2,017,033	+		PfGW456L13_1830	0.77	+0.1
2,017,033	+				+1.1
2,017,033	+		PfGW456L13_1830	0.77	+0.1
2,017,033	+		PfGW456L13_1830	0.77	+1.3
2,017,034	-		PfGW456L13_1830	0.77	+1.4
2,017,034	-		PfGW456L13_1830	0.77	+0.2
2,017,034	-		PfGW456L13_1830	0.77	-0.8
2,017,034	-		PfGW456L13_1830	0.77	-0.1
2,017,034	-		PfGW456L13_1830	0.77	+0.1
2,017,034	-		PfGW456L13_1830	0.77	-0.4
2,017,034	-		PfGW456L13_1830	0.77	-0.6
2,017,034	-		PfGW456L13_1830	0.77	+0.2
2,017,034	-		PfGW456L13_1830	0.77	-0.3
2,017,034	-		PfGW456L13_1830	0.77	-0.0
2,017,034	-		PfGW456L13_1830	0.77	+1.6
2,017,034	-		PfGW456L13_1830	0.77	+0.7
2,017,034	-		PfGW456L13_1830	0.77	-0.4
2,017,078	+		PfGW456L13_1830	0.80	-0.1
2,017,078	+		PfGW456L13_1830	0.80	+0.5
2,017,078	+		PfGW456L13_1830	0.80	+1.0
2,017,079	-		PfGW456L13_1830	0.80	-0.0
2,017,079	-		PfGW456L13_1830	0.80	-0.5
2,017,162	+		PfGW456L13_1830	0.84	+0.0
2,017,163	-		PfGW456L13_1830	0.84	+0.6
2,017,197	+		PfGW456L13_1830	0.86	-1.3
2,017,369	+				-0.2
2,017,370	-				-0.1
2,017,370	-				-1.2
2,017,370	-				+0.8
2,017,370	-				+0.4
2,017,370	-				+0.6
2,017,378	+				+0.6
2,017,378	+				+1.1
2,017,378	+				-1.5
2,017,379	-				-0.9
2,017,379	-				+1.5
2,017,379	-				-0.9
2,017,379	-				+1.6
2,017,385	+				+1.1
2,017,386	-				-1.1
2,017,436	+				-0.1
2,017,436	+				+0.1
2,017,479	+				-0.1
2,017,487	+				-0.6
2,017,487	+				+0.3
2,017,487	+				+0.2
2,017,487	+				+0.3
2,017,487	+				-0.9
2,017,487	+				+1.2
2,017,487	+				+0.1
2,017,487	+				+0.6
2,017,487	+				-0.4
2,017,488	-				+0.6
2,017,488	-				-0.0
2,017,488	-				+0.1
2,017,488	-				-0.1
2,017,488	-				+0.7
2,017,488	-				-1.2
2,017,507	+				-0.3
2,017,507	+				+1.6
2,017,507	+				+0.2
2,017,507	+				+0.9
2,017,507	+				-0.4
2,017,507	+				-0.6
2,017,508	-				+0.2
2,017,508	-				+0.9
2,017,508	-				+0.5
2,017,508	-				-0.3
2,017,508	-				+0.3
2,017,509	+				-0.1
2,017,563	+				-0.2
2,017,605	+				-1.6
2,017,622	+				-0.3
2,017,622	+				+1.0
2,017,622	+				+0.7
2,017,622	+				-1.0
2,017,623	-				+0.1
2,017,635	+				+1.1
2,017,635	+				+0.6
2,017,636	-				-0.1
2,017,636	-				+0.6
2,017,636	-				-2.2
2,017,636	-				+0.6
2,017,938	-		PfGW456L13_1831	0.20	+0.1
2,017,959	+		PfGW456L13_1831	0.21	+0.5
2,017,959	+		PfGW456L13_1831	0.21	-0.8
2,017,959	+		PfGW456L13_1831	0.21	-0.1
2,017,959	+		PfGW456L13_1831	0.21	+1.0
2,017,959	+		PfGW456L13_1831	0.21	-0.4
2,017,959	+		PfGW456L13_1831	0.21	+0.3
2,017,959	+		PfGW456L13_1831	0.21	+0.1
2,017,959	+		PfGW456L13_1831	0.21	+0.1
2,017,959	+		PfGW456L13_1831	0.21	+0.3
2,017,959	+		PfGW456L13_1831	0.21	+0.3
2,017,959	+		PfGW456L13_1831	0.21	-0.0
2,017,959	+		PfGW456L13_1831	0.21	-0.5
2,017,959	+		PfGW456L13_1831	0.21	-0.2
2,017,960	-		PfGW456L13_1831	0.21	+0.3
2,017,960	-		PfGW456L13_1831	0.21	+0.1
2,017,960	-		PfGW456L13_1831	0.21	+0.7
2,017,960	-		PfGW456L13_1831	0.21	+1.9
2,017,960	-		PfGW456L13_1831	0.21	-0.2
2,017,960	-		PfGW456L13_1831	0.21	+0.6
2,017,960	-		PfGW456L13_1831	0.21	+0.1
2,017,960	-		PfGW456L13_1831	0.21	-0.2
2,017,960	-		PfGW456L13_1831	0.21	+0.1
2,017,960	-		PfGW456L13_1831	0.21	-0.7
2,017,960	-		PfGW456L13_1831	0.21	-0.4
2,017,960	-		PfGW456L13_1831	0.21	+0.6
2,017,984	-		PfGW456L13_1831	0.23	+0.1
2,017,984	-		PfGW456L13_1831	0.23	+1.4
2,017,984	-		PfGW456L13_1831	0.23	-0.5
2,017,984	-		PfGW456L13_1831	0.23	-0.6
2,017,984	-		PfGW456L13_1831	0.23	-0.1
2,017,984	-		PfGW456L13_1831	0.23	+0.2
2,018,063	+		PfGW456L13_1831	0.28	-1.0
2,018,063	+		PfGW456L13_1831	0.28	+1.1
2,018,063	+		PfGW456L13_1831	0.28	+0.6
2,018,064	-		PfGW456L13_1831	0.28	-0.1
2,018,366	+		PfGW456L13_1831	0.49	+0.8
2,018,367	-		PfGW456L13_1831	0.49	-1.5